Protein–RNA interactions for Protein: O14647

CHD2, Chromodomain-helicase-DNA-binding protein 2, humanhuman

Known RBP Predictions only

Length 1,828 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD2O14647 ABCC3-217ENST00000515707 656 ntTSL 3 BASIC30.16■■■□□ 2.42
CHD2O14647 ABHD1-207ENST00000621324 1078 ntTSL 5 BASIC30.16■■■□□ 2.42
CHD2O14647 IL15RA-204ENST00000379977 1626 ntAPPRIS P3 TSL 1 (best) BASIC30.16■■■□□ 2.42
CHD2O14647 SPR-201ENST00000234454 1480 ntAPPRIS P1 TSL 1 (best) BASIC30.16■■■□□ 2.42
CHD2O14647 NFKBID-201ENST00000396901 1834 ntAPPRIS P2 TSL 1 (best) BASIC30.16■■■□□ 2.42
CHD2O14647 MFSD7-203ENST00000404286 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC30.16■■■□□ 2.42
CHD2O14647 NFKBID-211ENST00000641389 1834 ntAPPRIS ALT2 BASIC30.16■■■□□ 2.42
CHD2O14647 MME-217ENST00000616757 1315 ntTSL 5 BASIC30.16■■■□□ 2.42
CHD2O14647 ALDH6A1-201ENST00000350259 1869 ntAPPRIS ALT2 TSL 2 BASIC30.16■■■□□ 2.42
CHD2O14647 TTC39A-203ENST00000371747 1876 ntTSL 2 BASIC30.16■■■□□ 2.42
CHD2O14647 RBM17P2-201ENST00000616397 1405 ntBASIC30.15■■■□□ 2.42
CHD2O14647 FMR1-AS1_2.1-201ENST00000613724 127 ntBASIC30.15■■■□□ 2.42
CHD2O14647 MAGIX-206ENST00000615626 1057 ntTSL 1 (best) BASIC30.15■■■□□ 2.42
CHD2O14647 MMP23B-201ENST00000356026 1326 ntAPPRIS P1 TSL 1 (best) BASIC30.15■■■□□ 2.42
CHD2O14647 D2HGDH-203ENST00000403782 2208 ntTSL 2 BASIC30.15■■■□□ 2.42
CHD2O14647 LSM8-203ENST00000422760 1920 ntTSL 1 (best) BASIC30.15■■■□□ 2.42
CHD2O14647 KRT10-201ENST00000269576 2124 ntAPPRIS P1 TSL 1 (best) BASIC30.14■■■□□ 2.42
CHD2O14647 ACADS-202ENST00000411593 1398 ntTSL 2 BASIC30.14■■■□□ 2.42
CHD2O14647 LGALS9B-202ENST00000423676 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC30.14■■■□□ 2.42
CHD2O14647 HOXA4-204ENST00000610970 1728 ntAPPRIS P1 TSL 1 (best) BASIC30.14■■■□□ 2.42
CHD2O14647 HEXDC-202ENST00000337014 2285 ntTSL 1 (best) BASIC30.14■■■□□ 2.42
CHD2O14647 PLK5-204ENST00000588430 900 ntAPPRIS ALT2 TSL 5 BASIC30.14■■■□□ 2.42
CHD2O14647 FAHD1-201ENST00000382666 1964 ntTSL 2 BASIC30.14■■■□□ 2.41
CHD2O14647 RAB40B-201ENST00000269347 2189 ntTSL 2 BASIC30.13■■■□□ 2.41
CHD2O14647 CDCA4-202ENST00000392590 1536 ntAPPRIS P1 TSL 1 (best) BASIC30.13■■■□□ 2.41
CHD2O14647 OLFM1-202ENST00000277415 1014 ntTSL 1 (best) BASIC30.13■■■□□ 2.41
CHD2O14647 NENF-201ENST00000366988 949 ntAPPRIS P1 TSL 1 (best) BASIC30.13■■■□□ 2.41
CHD2O14647 DLEU7-203ENST00000504404 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC30.13■■■□□ 2.41
CHD2O14647 SEPT5-210ENST00000455784 2070 ntAPPRIS P1 TSL 1 (best) BASIC30.13■■■□□ 2.41
CHD2O14647 YKT6-207ENST00000496112 1270 ntTSL 2 BASIC30.12■■■□□ 2.41
CHD2O14647 TNFRSF1B-204ENST00000536782 557 ntTSL 1 (best) BASIC30.12■■■□□ 2.41
CHD2O14647 PEA15-201ENST00000360472 2471 ntAPPRIS P1 TSL 1 (best) BASIC30.12■■■□□ 2.41
CHD2O14647 NIPSNAP2-201ENST00000322090 1999 ntAPPRIS P1 TSL 1 (best) BASIC30.12■■■□□ 2.41
CHD2O14647 POU3F3-201ENST00000361360 3064 ntAPPRIS P1 BASIC30.12■■■□□ 2.41
CHD2O14647 DIXDC1-205ENST00000529225 1945 ntTSL 5 BASIC30.12■■■□□ 2.41
CHD2O14647 TTBK2-207ENST00000567840 1961 ntTSL 1 (best) BASIC30.12■■■□□ 2.41
CHD2O14647 IFI27L2-201ENST00000238609 511 ntAPPRIS P1 TSL 1 (best) BASIC30.12■■■□□ 2.41
CHD2O14647 TRPT1-201ENST00000317459 962 ntAPPRIS P3 TSL 1 (best) BASIC30.12■■■□□ 2.41
CHD2O14647 CXADR-204ENST00000400166 1080 ntTSL 1 (best) BASIC30.12■■■□□ 2.41
CHD2O14647 SERPINH1P1-201ENST00000419794 1249 ntBASIC30.12■■■□□ 2.41
CHD2O14647 DDN-AS1-202ENST00000547866 2114 ntTSL 3 BASIC30.12■■■□□ 2.41
CHD2O14647 KLHL26-205ENST00000599006 989 ntTSL 5 BASIC30.12■■■□□ 2.41
CHD2O14647 JOSD2-205ENST00000601423 802 ntAPPRIS P1 TSL 1 (best) BASIC30.12■■■□□ 2.41
CHD2O14647 AC000035.1-201ENST00000634116 343 ntTSL 5 BASIC30.12■■■□□ 2.41
CHD2O14647 ST3GAL5-269ENST00000640992 2292 ntAPPRIS ALT2 TSL 5 BASIC30.12■■■□□ 2.41
CHD2O14647 KCNH6-203ENST00000580652 1703 ntTSL 1 (best) BASIC30.12■■■□□ 2.41
CHD2O14647 TMED4-205ENST00000481238 1755 ntTSL 1 (best) BASIC30.12■■■□□ 2.41
CHD2O14647 GPS1-204ENST00000392358 2276 ntTSL 1 (best) BASIC30.11■■■□□ 2.41
CHD2O14647 CDC42EP5-201ENST00000301200 864 ntAPPRIS P1 TSL 1 (best) BASIC30.11■■■□□ 2.41
CHD2O14647 RAD9A-201ENST00000307980 2119 ntAPPRIS P1 TSL 1 (best) BASIC30.11■■■□□ 2.41
CHD2O14647 PGF-206ENST00000555567 1927 ntAPPRIS P3 TSL 1 (best) BASIC30.11■■■□□ 2.41
CHD2O14647 C22orf34-203ENST00000405854 1593 ntTSL 5 BASIC30.1■■■□□ 2.41
CHD2O14647 MFSD3-201ENST00000301327 1548 ntAPPRIS P1 TSL 1 (best) BASIC30.1■■■□□ 2.41
CHD2O14647 GGTLC1-201ENST00000278765 974 ntAPPRIS P1 TSL 1 (best) BASIC30.1■■■□□ 2.41
CHD2O14647 C15orf48-201ENST00000344300 875 ntAPPRIS P1 TSL 1 (best) BASIC30.1■■■□□ 2.41
CHD2O14647 AC105001.1-201ENST00000506149 821 ntTSL 1 (best) BASIC30.1■■■□□ 2.41
CHD2O14647 PLEKHB1-216ENST00000543085 632 ntTSL 3 BASIC30.1■■■□□ 2.41
CHD2O14647 AC022167.3-201ENST00000564485 427 ntTSL 2 BASIC30.1■■■□□ 2.41
CHD2O14647 AC007493.2-201ENST00000568427 478 ntTSL 3 BASIC30.1■■■□□ 2.41
CHD2O14647 NREP-202ENST00000379671 2581 ntAPPRIS P1 TSL 1 (best) BASIC30.1■■■□□ 2.41
CHD2O14647 CAPN10-204ENST00000354082 1999 ntTSL 1 (best) BASIC30.1■■■□□ 2.41
CHD2O14647 KCNK4-201ENST00000394525 1673 ntAPPRIS P1 TSL 1 (best) BASIC30.1■■■□□ 2.41
CHD2O14647 AC092143.2-201ENST00000554623 985 ntTSL 3 BASIC30.1■■■□□ 2.41
CHD2O14647 LHPP-202ENST00000368842 1622 ntAPPRIS P1 TSL 1 (best) BASIC30.09■■■□□ 2.41
CHD2O14647 EGR3-203ENST00000519492 1500 ntTSL 5 BASIC30.09■■■□□ 2.41
CHD2O14647 R3HCC1-210ENST00000625275 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC30.09■■■□□ 2.41
CHD2O14647 OSCAR-209ENST00000616215 2016 ntAPPRIS ALT2 TSL 5 BASIC30.09■■■□□ 2.41
CHD2O14647 LINC01962-201ENST00000513771 411 ntTSL 2 BASIC30.09■■■□□ 2.41
CHD2O14647 FFAR3-202ENST00000594310 1182 ntAPPRIS P1 BASIC30.09■■■□□ 2.41
CHD2O14647 NOXO1-201ENST00000354249 1618 ntTSL 1 (best) BASIC30.09■■■□□ 2.41
CHD2O14647 PLEKHB1-201ENST00000227214 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC30.09■■■□□ 2.41
CHD2O14647 CCR10-203ENST00000591765 1942 ntTSL 3 BASIC30.09■■■□□ 2.41
CHD2O14647 AC079328.2-202ENST00000560903 1410 ntTSL 1 (best) BASIC30.09■■■□□ 2.41
CHD2O14647 MIF4GD-202ENST00000325102 1306 ntAPPRIS P1 TSL 2 BASIC30.08■■■□□ 2.41
CHD2O14647 PUSL1-201ENST00000379031 1287 ntAPPRIS P1 TSL 1 (best) BASIC30.08■■■□□ 2.41
CHD2O14647 FLYWCH2-202ENST00000396958 1036 ntAPPRIS P2 TSL 1 (best) BASIC30.08■■■□□ 2.41
CHD2O14647 AL121761.1-202ENST00000412571 415 ntTSL 2 BASIC30.08■■■□□ 2.41
CHD2O14647 UBE2SP1-201ENST00000450587 669 ntBASIC30.08■■■□□ 2.41
CHD2O14647 GATS-209ENST00000454084 1030 ntTSL 3 BASIC30.08■■■□□ 2.41
CHD2O14647 OR2A1-AS1-201ENST00000462305 773 ntBASIC30.08■■■□□ 2.41
CHD2O14647 AC004889.1-204ENST00000474656 773 ntTSL 3 BASIC30.08■■■□□ 2.41
CHD2O14647 LINC00526-201ENST00000581067 1875 ntBASIC30.08■■■□□ 2.41
CHD2O14647 PMAIP1-201ENST00000269518 1262 ntTSL 1 (best) BASIC30.08■■■□□ 2.41
CHD2O14647 DUSP15-205ENST00000398084 1256 ntTSL 5 BASIC30.08■■■□□ 2.41
CHD2O14647 CALM1-202ENST00000447653 1104 ntAPPRIS ALT1 TSL 2 BASIC30.08■■■□□ 2.41
CHD2O14647 SPI1-204ENST00000533968 1290 ntTSL 1 (best) BASIC30.08■■■□□ 2.41
CHD2O14647 NDUFS3-212ENST00000534208 583 ntTSL 4 BASIC30.08■■■□□ 2.41
CHD2O14647 Z97653.1-201ENST00000567096 446 ntTSL 3 BASIC30.08■■■□□ 2.41
CHD2O14647 AC016588.1-201ENST00000591533 542 ntTSL 4 BASIC30.08■■■□□ 2.41
CHD2O14647 ZNF264-205ENST00000599653 705 ntTSL 2 BASIC30.08■■■□□ 2.41
CHD2O14647 TBC1D10A-201ENST00000215790 2077 ntAPPRIS P3 TSL 1 (best) BASIC30.08■■■□□ 2.41
CHD2O14647 PACRGL-227ENST00000513459 1773 ntTSL 5 BASIC30.07■■■□□ 2.41
CHD2O14647 DNAH17-AS1-202ENST00000591373 1453 ntTSL 5 BASIC30.07■■■□□ 2.4
CHD2O14647 KRT16P2-201ENST00000414673 1423 ntBASIC30.07■■■□□ 2.4
CHD2O14647 NKX6-3-202ENST00000524115 1683 ntTSL 2 BASIC30.07■■■□□ 2.4
CHD2O14647 IGFBP1-203ENST00000468955 1369 ntTSL 5 BASIC30.07■■■□□ 2.4
CHD2O14647 BCL2L12-212ENST00000616144 1854 ntAPPRIS P3 TSL 1 (best) BASIC30.07■■■□□ 2.4
CHD2O14647 PARP9-207ENST00000492382 1837 ntTSL 1 (best) BASIC30.07■■■□□ 2.4
CHD2O14647 HLA-C-201ENST00000376228 1536 ntAPPRIS P2 BASIC30.07■■■□□ 2.4
CHD2O14647 RHOC-203ENST00000369632 1026 ntAPPRIS P1 TSL 3 BASIC30.07■■■□□ 2.4
Retrieved 100 of 98,524 protein–RNA pairs in 25 ms