Protein–RNA interactions for Protein: O14646

CHD1, Chromodomain-helicase-DNA-binding protein 1, humanhuman

Predictions only

Length 1,710 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1O14646 SELENOF-203ENST00000401030 727 ntTSL 2 BASIC35.23■■■■□ 3.23
CHD1O14646 ZDHHC20-204ENST00000415724 1296 ntAPPRIS ALT2 TSL 5 BASIC35.23■■■■□ 3.23
CHD1O14646 AC108025.1-201ENST00000453678 1058 ntTSL 5 BASIC35.23■■■■□ 3.23
CHD1O14646 MRPL2-207ENST00000487429 905 ntTSL 1 (best) BASIC35.23■■■■□ 3.23
CHD1O14646 ANK1-211ENST00000522231 1060 ntTSL 1 (best) BASIC35.23■■■■□ 3.23
CHD1O14646 ANK1-212ENST00000522543 1160 ntTSL 2 BASIC35.23■■■■□ 3.23
CHD1O14646 CDKN2A-213ENST00000579122 666 ntTSL 3 BASIC35.23■■■■□ 3.23
CHD1O14646 AC013268.1-201ENST00000639717 1208 ntTSL 5 BASIC35.23■■■■□ 3.23
CHD1O14646 SMUG1-202ENST00000337581 1571 ntAPPRIS P1 TSL 2 BASIC35.23■■■■□ 3.23
CHD1O14646 YWHAZ-209ENST00000419477 891 ntAPPRIS P1 TSL 3 BASIC35.23■■■■□ 3.23
CHD1O14646 TNNT1-208ENST00000587465 1065 ntAPPRIS ALT2 TSL 5 BASIC35.23■■■■□ 3.23
CHD1O14646 HSF4-215ENST00000521374 1515 ntAPPRIS P1 TSL 1 (best) BASIC35.22■■■■□ 3.23
CHD1O14646 VPS29-206ENST00000549578 1523 ntAPPRIS P1 TSL 1 (best) BASIC35.22■■■■□ 3.23
CHD1O14646 MYCL-201ENST00000372815 1944 ntTSL 1 (best) BASIC35.22■■■■□ 3.23
CHD1O14646 TUSC3-203ENST00000503731 1498 ntAPPRIS P4 TSL 1 (best) BASIC35.22■■■■□ 3.23
CHD1O14646 CNTD2-202ENST00000430325 1817 ntAPPRIS P2 TSL 2 BASIC35.22■■■■□ 3.23
CHD1O14646 MCRIP1-204ENST00000570507 765 ntTSL 2 BASIC35.22■■■■□ 3.23
CHD1O14646 MCRIP1-208ENST00000575061 618 ntTSL 5 BASIC35.22■■■■□ 3.23
CHD1O14646 CBWD3-202ENST00000377342 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC35.21■■■■□ 3.23
CHD1O14646 ZNF444-211ENST00000592949 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC35.21■■■■□ 3.23
CHD1O14646 TRAPPC3-204ENST00000373166 1265 ntAPPRIS P1 TSL 1 (best) BASIC35.21■■■■□ 3.23
CHD1O14646 AC114730.2-201ENST00000417267 668 ntTSL 3 BASIC35.21■■■■□ 3.23
CHD1O14646 C20orf166-AS1-202ENST00000436101 761 ntTSL 5 BASIC35.21■■■■□ 3.23
CHD1O14646 FAM181A-203ENST00000556222 1162 ntAPPRIS P1 TSL 1 (best) BASIC35.21■■■■□ 3.23
CHD1O14646 ACSS1-202ENST00000376726 2244 ntTSL 2 BASIC35.21■■■■□ 3.23
CHD1O14646 C10orf76-201ENST00000311122 724 ntTSL 1 (best) BASIC35.2■■■■□ 3.23
CHD1O14646 ABHD17AP6-201ENST00000458502 1044 ntBASIC35.2■■■■□ 3.23
CHD1O14646 AC105001.1-201ENST00000506149 821 ntTSL 1 (best) BASIC35.2■■■■□ 3.23
CHD1O14646 REXO2-216ENST00000544196 452 ntTSL 3 BASIC35.2■■■■□ 3.23
CHD1O14646 PDIA2-201ENST00000219406 1698 ntAPPRIS P2 TSL 1 (best) BASIC35.2■■■■□ 3.23
CHD1O14646 DOK3-205ENST00000501403 1872 ntAPPRIS P1 TSL 5 BASIC35.2■■■■□ 3.23
CHD1O14646 SMAGP-205ENST00000603864 1518 ntAPPRIS P1 TSL 2 BASIC35.2■■■■□ 3.23
CHD1O14646 IRF3-201ENST00000309877 1691 ntAPPRIS P1 TSL 1 (best) BASIC35.2■■■■□ 3.23
CHD1O14646 SCO2-201ENST00000252785 992 ntAPPRIS P1 TSL 2 BASIC35.2■■■■□ 3.23
CHD1O14646 DGCR6-201ENST00000331444 1214 ntAPPRIS P1 TSL 1 (best) BASIC35.2■■■■□ 3.23
CHD1O14646 AC006252.1-201ENST00000483834 1101 ntTSL 1 (best) BASIC35.2■■■■□ 3.23
CHD1O14646 ZNF134-203ENST00000600344 483 ntTSL 1 (best) BASIC35.2■■■■□ 3.23
CHD1O14646 SAXO1-201ENST00000380530 1727 ntAPPRIS ALT2 TSL 2 BASIC35.19■■■■□ 3.22
CHD1O14646 GCC2-AS1-202ENST00000440975 574 ntTSL 4 BASIC35.19■■■■□ 3.22
CHD1O14646 UMAD1-202ENST00000463725 559 ntTSL 4 BASIC35.19■■■■□ 3.22
CHD1O14646 AC122129.2-201ENST00000583598 466 ntTSL 5 BASIC35.19■■■■□ 3.22
CHD1O14646 KRT17P1-201ENST00000399211 1546 ntBASIC35.19■■■■□ 3.22
CHD1O14646 HP1BP3-202ENST00000375000 928 ntTSL 1 (best) BASIC35.18■■■■□ 3.22
CHD1O14646 STAG3L3-201ENST00000423834 1262 ntTSL 2 BASIC35.18■■■■□ 3.22
CHD1O14646 ACSL1-205ENST00000504900 1583 ntTSL 5 BASIC35.18■■■■□ 3.22
CHD1O14646 GLT8D2-205ENST00000548660 1835 ntAPPRIS P1 TSL 2 BASIC35.18■■■■□ 3.22
CHD1O14646 RBM17P2-201ENST00000616397 1405 ntBASIC35.18■■■■□ 3.22
CHD1O14646 AL807752.2-201ENST00000435463 301 ntTSL 3 BASIC35.18■■■■□ 3.22
CHD1O14646 PLSCR3-202ENST00000535512 2067 ntAPPRIS P1 TSL 1 (best) BASIC35.18■■■■□ 3.22
CHD1O14646 AP003733.4-201ENST00000623785 1697 ntBASIC35.17■■■■□ 3.22
CHD1O14646 MAP3K14-AS1-202ENST00000585351 893 ntTSL 1 (best) BASIC35.17■■■■□ 3.22
CHD1O14646 KCNF1-201ENST00000295082 2289 ntAPPRIS P1 BASIC35.16■■■■□ 3.22
CHD1O14646 HLA-C-203ENST00000383329 1554 ntAPPRIS ALT2 BASIC35.16■■■■□ 3.22
CHD1O14646 TNIP2-203ENST00000503235 1653 ntTSL 3 BASIC35.16■■■■□ 3.22
CHD1O14646 TPD52L1-203ENST00000368402 1308 ntTSL 1 (best) BASIC35.16■■■■□ 3.22
CHD1O14646 CCDC157-202ENST00000399824 1759 ntAPPRIS ALT2 TSL 1 (best) BASIC35.16■■■■□ 3.22
CHD1O14646 PTX4-203ENST00000447419 1516 ntAPPRIS ALT2 TSL 5 BASIC35.16■■■■□ 3.22
CHD1O14646 TSTD1-202ENST00000368023 574 ntAPPRIS ALT2 TSL 2 BASIC35.16■■■■□ 3.22
CHD1O14646 AC005943.1-201ENST00000585937 1002 ntAPPRIS P1 TSL 3 BASIC35.16■■■■□ 3.22
CHD1O14646 AC093762.2-201ENST00000641700 291 ntAPPRIS P1 BASIC35.16■■■■□ 3.22
CHD1O14646 TNIP2-206ENST00000510267 2006 ntAPPRIS ALT2 TSL 2 BASIC35.16■■■■□ 3.22
CHD1O14646 MMP23B-201ENST00000356026 1326 ntAPPRIS P1 TSL 1 (best) BASIC35.16■■■■□ 3.22
CHD1O14646 NAPSA-201ENST00000253719 1548 ntAPPRIS P1 TSL 1 (best) BASIC35.16■■■■□ 3.22
CHD1O14646 CYYR1-202ENST00000400043 735 ntTSL 1 (best) BASIC35.15■■■■□ 3.22
CHD1O14646 TNIK-208ENST00000465393 750 ntTSL 1 (best) BASIC35.15■■■■□ 3.22
CHD1O14646 PAIP2-208ENST00000511706 468 ntTSL 5 BASIC35.15■■■■□ 3.22
CHD1O14646 PNMA6B-201ENST00000538162 1200 ntBASIC35.15■■■■□ 3.22
CHD1O14646 AQP4-AS1-204ENST00000582605 525 ntTSL 4 BASIC35.15■■■■□ 3.22
CHD1O14646 NPDC1-201ENST00000371600 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC35.15■■■■□ 3.22
CHD1O14646 HSF1-201ENST00000400780 2105 ntTSL 5 BASIC35.15■■■■□ 3.22
CHD1O14646 EBF4-210ENST00000609451 2012 ntAPPRIS ALT1 TSL 5 BASIC35.15■■■■□ 3.22
CHD1O14646 BBC3-203ENST00000439096 1838 ntAPPRIS P1 TSL 1 (best) BASIC35.15■■■■□ 3.22
CHD1O14646 HMBS-201ENST00000278715 1501 ntAPPRIS P1 TSL 1 (best) BASIC35.15■■■■□ 3.22
CHD1O14646 CSNK1G3-206ENST00000511130 1356 ntTSL 2 BASIC35.15■■■■□ 3.22
CHD1O14646 WDR74-201ENST00000278856 1289 ntAPPRIS P1 TSL 1 (best) BASIC35.15■■■■□ 3.22
CHD1O14646 SPIB-206ENST00000596074 847 ntTSL 2 BASIC35.15■■■■□ 3.22
CHD1O14646 AC090377.1-201ENST00000585691 1762 ntTSL 3 BASIC35.14■■■■□ 3.22
CHD1O14646 SYT7-209ENST00000542836 1362 ntTSL 5 BASIC35.14■■■■□ 3.22
CHD1O14646 ARHGEF35-201ENST00000378115 2431 ntAPPRIS P1 TSL 1 (best) BASIC35.14■■■■□ 3.22
CHD1O14646 FOXN3-AS1-201ENST00000555562 1077 ntTSL 1 (best) BASIC35.14■■■■□ 3.22
CHD1O14646 AC053503.5-201ENST00000601508 636 ntBASIC35.14■■■■□ 3.22
CHD1O14646 AL353803.4-201ENST00000565882 1934 ntBASIC35.14■■■■□ 3.22
CHD1O14646 IQCJ-SCHIP1-202ENST00000460298 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC35.13■■■■□ 3.21
CHD1O14646 IGFBP1-203ENST00000468955 1369 ntTSL 5 BASIC35.13■■■■□ 3.21
CHD1O14646 HAUS4-205ENST00000541587 1637 ntAPPRIS P1 TSL 1 (best) BASIC35.13■■■■□ 3.21
CHD1O14646 OR10H2-201ENST00000305899 1041 ntAPPRIS P1 BASIC35.13■■■■□ 3.21
CHD1O14646 GGTLC1-203ENST00000335694 1046 ntAPPRIS P1 TSL 1 (best) BASIC35.13■■■■□ 3.21
CHD1O14646 AL161908.1-201ENST00000451449 449 ntTSL 2 BASIC35.13■■■■□ 3.21
CHD1O14646 HTT-AS-201ENST00000503893 515 ntTSL 4 BASIC35.13■■■■□ 3.21
CHD1O14646 MIR381HG-201ENST00000553692 425 ntTSL 3 BASIC35.13■■■■□ 3.21
CHD1O14646 AC012306.2-201ENST00000609350 630 ntBASIC35.13■■■■□ 3.21
CHD1O14646 IGFBP1-201ENST00000275525 1653 ntAPPRIS P2 TSL 1 (best) BASIC35.13■■■■□ 3.21
CHD1O14646 FAM58A-204ENST00000576892 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC35.13■■■■□ 3.21
CHD1O14646 GOLGA6L9-202ENST00000618348 1710 ntAPPRIS P1 TSL 5 BASIC35.13■■■■□ 3.21
CHD1O14646 LTB4R-201ENST00000345363 1616 ntAPPRIS P1 TSL 1 (best) BASIC35.13■■■■□ 3.21
CHD1O14646 INPP1-201ENST00000322522 1919 ntAPPRIS P1 TSL 1 (best) BASIC35.13■■■■□ 3.21
CHD1O14646 AP004607.7-201ENST00000527152 1677 ntBASIC35.12■■■■□ 3.21
CHD1O14646 COL11A2-204ENST00000395194 1194 ntTSL 1 (best) BASIC35.12■■■■□ 3.21
CHD1O14646 AC087499.1-201ENST00000418141 1075 ntBASIC35.12■■■■□ 3.21
CHD1O14646 TSPY7P-201ENST00000431358 1114 ntBASIC35.12■■■■□ 3.21
Retrieved 100 of 98,524 protein–RNA pairs in 17.5 ms