Protein–RNA interactions for Protein: O14521

SDHD, Succinate dehydrogenase [ubiquinone] cytochrome b small subunit, mitochondrial, humanhuman

Predictions only

Length 159 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SDHDO14521 SPATA5L1-201ENST00000305560 2570 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
SDHDO14521 PHOSPHO1-202ENST00000413580 2173 ntTSL 2 BASIC20.62■□□□□ 0.89
SDHDO14521 RCE1-202ENST00000524506 1379 ntTSL 5 BASIC20.62■□□□□ 0.89
SDHDO14521 MGAT4B-201ENST00000292591 2446 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
SDHDO14521 TERF1-202ENST00000276603 1677 ntAPPRIS P4 TSL 1 (best) BASIC20.62■□□□□ 0.89
SDHDO14521 CEL-201ENST00000372080 2384 ntAPPRIS P1 TSL 5 BASIC20.62■□□□□ 0.89
SDHDO14521 MEIS1-AS3-201ENST00000454167 707 ntTSL 4 BASIC20.62■□□□□ 0.89
SDHDO14521 AC010141.3-201ENST00000456659 717 ntBASIC20.62■□□□□ 0.89
SDHDO14521 HAUS4-201ENST00000206474 1642 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
SDHDO14521 LRP5-201ENST00000294304 5159 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
SDHDO14521 MAPK9-206ENST00000425491 2266 ntTSL 5 BASIC20.62■□□□□ 0.89
SDHDO14521 BX005266.2-202ENST00000446626 2245 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
SDHDO14521 SSBP3-216ENST00000610401 3168 ntTSL 5 BASIC20.62■□□□□ 0.89
SDHDO14521 CAPG-201ENST00000263867 1442 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
SDHDO14521 NR2F2-204ENST00000453270 1712 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
SDHDO14521 WHAMM-201ENST00000286760 5101 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
SDHDO14521 KREMEN2-201ENST00000303746 2326 ntAPPRIS P4 TSL 1 (best) BASIC20.61■□□□□ 0.89
SDHDO14521 GRB10-206ENST00000402497 2289 ntTSL 5 BASIC20.61■□□□□ 0.89
SDHDO14521 TPM1-204ENST00000334895 1637 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
SDHDO14521 CDK18-203ENST00000429964 1648 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
SDHDO14521 SPPL2B-212ENST00000618220 2459 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
SDHDO14521 GAL3ST3-201ENST00000312006 2133 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
SDHDO14521 FOXP1-201ENST00000318779 843 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
SDHDO14521 PEX5-204ENST00000412720 2105 ntTSL 2 BASIC20.61■□□□□ 0.89
SDHDO14521 AK3-203ENST00000447596 705 ntTSL 2 BASIC20.61■□□□□ 0.89
SDHDO14521 AC004540.2-202ENST00000451264 508 ntTSL 2 BASIC20.61■□□□□ 0.89
SDHDO14521 KRAS-204ENST00000557334 1052 ntTSL 5 BASIC20.61■□□□□ 0.89
SDHDO14521 MEIS3-202ENST00000441740 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
SDHDO14521 AL049796.1-201ENST00000565336 1766 ntBASIC20.61■□□□□ 0.89
SDHDO14521 CD7-207ENST00000584284 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
SDHDO14521 POMGNT2-202ENST00000441964 2531 ntAPPRIS P1 TSL 4 BASIC20.61■□□□□ 0.89
SDHDO14521 NAE1-203ENST00000379463 1909 ntTSL 2 BASIC20.61■□□□□ 0.89
SDHDO14521 BCKDK-201ENST00000219794 2128 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
SDHDO14521 NSUN2-206ENST00000506139 2619 ntAPPRIS ALT2 TSL 2 BASIC20.6■□□□□ 0.89
SDHDO14521 WNT10B-202ENST00000403957 1817 ntTSL 5 BASIC20.6■□□□□ 0.89
SDHDO14521 E4F1-206ENST00000565090 2028 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
SDHDO14521 HPCAL1-201ENST00000307845 1751 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
SDHDO14521 AP006284.1-201ENST00000527620 2210 ntTSL 2 BASIC20.6■□□□□ 0.89
SDHDO14521 KANK3-203ENST00000593649 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
SDHDO14521 C14orf80-211ENST00000450383 1107 ntAPPRIS ALT2 TSL 5 BASIC20.6■□□□□ 0.89
SDHDO14521 NEURL1B-203ENST00000522853 1263 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
SDHDO14521 AC087239.1-201ENST00000622671 572 ntBASIC20.6■□□□□ 0.89
SDHDO14521 CLN5-201ENST00000377453 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
SDHDO14521 FMNL2-201ENST00000288670 5575 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
SDHDO14521 PTPRM-211ENST00000580170 5941 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
SDHDO14521 C16orf59-201ENST00000361837 1662 ntAPPRIS P2 TSL 1 (best) BASIC20.6■□□□□ 0.89
SDHDO14521 ACOT2-201ENST00000238651 1774 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
SDHDO14521 SYF2-201ENST00000236273 1345 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
SDHDO14521 GLRX3-201ENST00000331244 1302 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
SDHDO14521 LRP5L-203ENST00000444995 1714 ntAPPRIS ALT2 TSL 5 BASIC20.59■□□□□ 0.89
SDHDO14521 STARD3-202ENST00000394250 1949 ntTSL 2 BASIC20.59■□□□□ 0.89
SDHDO14521 AC010616.1-201ENST00000597630 2078 ntAPPRIS P1 TSL 5 BASIC20.59■□□□□ 0.89
SDHDO14521 HSPE1-201ENST00000233893 950 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
SDHDO14521 NAXE-202ENST00000368234 901 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
SDHDO14521 AC019163.1-201ENST00000512634 610 ntTSL 2 BASIC20.59■□□□□ 0.89
SDHDO14521 AC010525.1-201ENST00000585559 441 ntBASIC20.59■□□□□ 0.89
SDHDO14521 FIZ1-205ENST00000592585 489 ntTSL 5 BASIC20.59■□□□□ 0.89
SDHDO14521 GPC1-202ENST00000420138 1835 ntTSL 5 BASIC20.59■□□□□ 0.89
SDHDO14521 TIMM50-201ENST00000314349 1612 ntAPPRIS P2 TSL 1 (best) BASIC20.59■□□□□ 0.89
SDHDO14521 ITGB1BP1-202ENST00000355346 1963 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
SDHDO14521 ZC3HAV1L-201ENST00000275766 1753 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
SDHDO14521 CACNG8-201ENST00000270458 8747 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
SDHDO14521 LINC01006-201ENST00000333319 2292 ntBASIC20.58■□□□□ 0.89
SDHDO14521 BASP1-203ENST00000616743 1711 ntAPPRIS P1 TSL 3 BASIC20.58■□□□□ 0.89
SDHDO14521 PARD3-202ENST00000346874 5894 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.89
SDHDO14521 PARD3-203ENST00000350537 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.89
SDHDO14521 GATM-206ENST00000558336 1522 ntTSL 2 BASIC20.58■□□□□ 0.89
SDHDO14521 DUSP2-201ENST00000288943 1688 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
SDHDO14521 B3GALT4-204ENST00000451237 1694 ntAPPRIS P1 BASIC20.58■□□□□ 0.89
SDHDO14521 FOXD4L3-201ENST00000342833 2039 ntAPPRIS P1 BASIC20.58■□□□□ 0.89
SDHDO14521 KRT3-201ENST00000417996 2319 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
SDHDO14521 GCH1-202ENST00000395514 1977 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
SDHDO14521 DAPK3-201ENST00000301264 2105 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
SDHDO14521 AL122058.1-201ENST00000412321 1166 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
SDHDO14521 NDUFAF8-201ENST00000431388 615 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
SDHDO14521 AC096887.1-203ENST00000607203 768 ntAPPRIS ALT2 TSL 5 BASIC20.58■□□□□ 0.89
SDHDO14521 AC003102.1-202ENST00000563394 1796 ntBASIC20.58■□□□□ 0.89
SDHDO14521 GLIPR2-203ENST00000396613 1917 ntTSL 4 BASIC20.58■□□□□ 0.88
SDHDO14521 CHRNB2-205ENST00000637900 2390 ntAPPRIS ALT1 TSL 5 BASIC20.58■□□□□ 0.88
SDHDO14521 TMEM125-201ENST00000432792 1850 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
SDHDO14521 NF2-201ENST00000334961 2020 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
SDHDO14521 PCED1A-202ENST00000360652 2016 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
SDHDO14521 PDXDC1-205ENST00000535621 2048 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
SDHDO14521 PLEKHA8-203ENST00000396259 2840 ntTSL 2 BASIC20.58■□□□□ 0.88
SDHDO14521 HMBS-201ENST00000278715 1501 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
SDHDO14521 MFSD3-201ENST00000301327 1548 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
SDHDO14521 TBX1-203ENST00000359500 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.88
SDHDO14521 LINC01089-202ENST00000429892 1521 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
SDHDO14521 WT1-210ENST00000639563 1494 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
SDHDO14521 NNT-AS1-206ENST00000606697 1945 ntTSL 2 BASIC20.57■□□□□ 0.88
SDHDO14521 POLR3GL-201ENST00000369313 818 ntTSL 2 BASIC20.57■□□□□ 0.88
SDHDO14521 CENPX-202ENST00000392359 805 ntAPPRIS P1 TSL 2 BASIC20.57■□□□□ 0.88
SDHDO14521 CHTF8-205ENST00000519520 856 ntTSL 2 BASIC20.57■□□□□ 0.88
SDHDO14521 PARN-205ENST00000539279 1557 ntTSL 2 BASIC20.57■□□□□ 0.88
SDHDO14521 CCDC189-211ENST00000545825 1046 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
SDHDO14521 PABPN1-207ENST00000556821 1220 ntTSL 2 BASIC20.57■□□□□ 0.88
SDHDO14521 ZNRF1-205ENST00000566250 1069 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
SDHDO14521 ZNRF1-206ENST00000567962 1234 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
SDHDO14521 TEAD2-208ENST00000598810 2191 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
SDHDO14521 CACNA1H-210ENST00000638323 8048 ntAPPRIS ALT2 TSL 5 BASIC20.57■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 20 ms