Protein–RNA interactions for Protein: O14493

CLDN4, Claudin-4, humanhuman

Predictions only

Length 209 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN4O14493 ILKAP-211ENST00000612675 1335 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
CLDN4O14493 CPE-201ENST00000402744 2421 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
CLDN4O14493 MPC1-202ENST00000360961 962 ntAPPRIS P2 TSL 5 BASIC20.11■□□□□ 0.81
CLDN4O14493 AC034268.1-201ENST00000441047 882 ntBASIC20.11■□□□□ 0.81
CLDN4O14493 ATP6V0B-204ENST00000471859 865 ntTSL 5 BASIC20.11■□□□□ 0.81
CLDN4O14493 KRT18P14-201ENST00000534205 1250 ntBASIC20.11■□□□□ 0.81
CLDN4O14493 AL583722.4-201ENST00000555524 716 ntTSL 3 BASIC20.11■□□□□ 0.81
CLDN4O14493 SLC35A3-213ENST00000638988 1286 ntTSL 5 BASIC20.11■□□□□ 0.81
CLDN4O14493 NKX2-4-201ENST00000351817 2238 ntAPPRIS P1 TSL 5 BASIC20.11■□□□□ 0.81
CLDN4O14493 EPS8L1-202ENST00000245618 2198 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
CLDN4O14493 BICDL2-201ENST00000389347 1811 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
CLDN4O14493 AC055733.4-201ENST00000638462 1354 ntBASIC20.1■□□□□ 0.81
CLDN4O14493 CHRAC1-203ENST00000519533 1678 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
CLDN4O14493 AFDN-AS1-201ENST00000359760 2238 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
CLDN4O14493 RAB1A-202ENST00000409751 1333 ntTSL 5 BASIC20.1■□□□□ 0.81
CLDN4O14493 CTDP1-208ENST00000613122 5866 ntAPPRIS P3 TSL 1 (best) BASIC20.1■□□□□ 0.81
CLDN4O14493 GZMM-201ENST00000264553 940 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
CLDN4O14493 RORB-AS1-201ENST00000417576 1178 ntTSL 5 BASIC20.1■□□□□ 0.81
CLDN4O14493 AC011511.3-201ENST00000587088 355 ntTSL 2 BASIC20.1■□□□□ 0.81
CLDN4O14493 SOCS7-202ENST00000613678 1827 ntTSL 5 BASIC20.1■□□□□ 0.81
CLDN4O14493 IL15RA-206ENST00000397248 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
CLDN4O14493 NPAS1-202ENST00000449844 2043 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
CLDN4O14493 LSR-203ENST00000360798 1963 ntTSL 2 BASIC20.1■□□□□ 0.81
CLDN4O14493 SPRTN-201ENST00000008440 1667 ntTSL 2 BASIC20.1■□□□□ 0.81
CLDN4O14493 TALDO1-201ENST00000319006 1346 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
CLDN4O14493 ATP5G2-208ENST00000552242 1950 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
CLDN4O14493 TPSG1-201ENST00000234798 1108 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
CLDN4O14493 PRR25-201ENST00000301698 1209 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
CLDN4O14493 PYY-201ENST00000360085 1053 ntAPPRIS P2 TSL 1 (best) BASIC20.09■□□□□ 0.81
CLDN4O14493 BHLHA9-201ENST00000391429 902 ntAPPRIS P1 BASIC20.09■□□□□ 0.81
CLDN4O14493 AC079140.4-201ENST00000507448 529 ntBASIC20.09■□□□□ 0.81
CLDN4O14493 AC087623.3-201ENST00000607047 1098 ntBASIC20.09■□□□□ 0.81
CLDN4O14493 SPAST-204ENST00000621856 1715 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
CLDN4O14493 NRSN1-204ENST00000378491 2354 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
CLDN4O14493 AKT1S1-206ENST00000391834 1849 ntAPPRIS P1 TSL 5 BASIC20.09■□□□□ 0.81
CLDN4O14493 MXRA8-203ENST00000445648 2001 ntTSL 2 BASIC20.09■□□□□ 0.81
CLDN4O14493 RPS6-203ENST00000380384 1355 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
CLDN4O14493 SMPD5-201ENST00000528912 1390 ntTSL 5 BASIC20.08■□□□□ 0.81
CLDN4O14493 HLA-C-203ENST00000383329 1554 ntAPPRIS ALT2 BASIC20.08■□□□□ 0.81
CLDN4O14493 GMDS-202ENST00000380815 1752 ntAPPRIS P3 TSL 1 (best) BASIC20.08■□□□□ 0.81
CLDN4O14493 MFSD6L-201ENST00000329805 2188 ntAPPRIS P1 BASIC20.08■□□□□ 0.81
CLDN4O14493 YAP1-210ENST00000615667 5398 ntAPPRIS ALT2 TSL 5 BASIC20.08■□□□□ 0.81
CLDN4O14493 ARSB-201ENST00000264914 5327 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
CLDN4O14493 KCNJ12-202ENST00000583088 5425 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
CLDN4O14493 USP25-202ENST00000285681 5216 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
CLDN4O14493 RBAK-202ENST00000396912 6551 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
CLDN4O14493 DCTN3-202ENST00000341694 899 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
CLDN4O14493 DCTN3-205ENST00000378916 773 ntTSL 2 BASIC20.08■□□□□ 0.81
CLDN4O14493 PYCARD-AS1-201ENST00000561916 1095 ntTSL 2 BASIC20.08■□□□□ 0.81
CLDN4O14493 G6PD-202ENST00000393562 2631 ntAPPRIS P3 TSL 1 (best) BASIC20.08■□□□□ 0.8
CLDN4O14493 G6PD-211ENST00000621232 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.8
CLDN4O14493 LIMS2-202ENST00000355119 2045 ntAPPRIS ALT1 TSL 1 (best) BASIC20.08■□□□□ 0.8
CLDN4O14493 ZSWIM7-201ENST00000399277 2008 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
CLDN4O14493 OXCT2-201ENST00000327582 1826 ntAPPRIS P1 BASIC20.08■□□□□ 0.8
CLDN4O14493 HAUS4-201ENST00000206474 1642 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
CLDN4O14493 FAM99A-202ENST00000538190 1989 ntBASIC20.08■□□□□ 0.8
CLDN4O14493 SYNGR2-203ENST00000588282 1553 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
CLDN4O14493 FAM43A-201ENST00000329759 2494 ntAPPRIS P1 BASIC20.08■□□□□ 0.8
CLDN4O14493 DMRT1-201ENST00000382276 2222 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
CLDN4O14493 MIR31HG-201ENST00000304425 745 ntTSL 2 BASIC20.07■□□□□ 0.8
CLDN4O14493 TMEM70-203ENST00000517439 617 ntTSL 2 BASIC20.07■□□□□ 0.8
CLDN4O14493 MIF4GD-211ENST00000580571 952 ntTSL 2 BASIC20.07■□□□□ 0.8
CLDN4O14493 PRMT1-221ENST00000610806 1192 ntTSL 3 BASIC20.07■□□□□ 0.8
CLDN4O14493 AC018553.2-201ENST00000637770 1064 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
CLDN4O14493 CITED2-202ENST00000536159 1797 ntAPPRIS P1 TSL 3 BASIC20.07■□□□□ 0.8
CLDN4O14493 CITED2-203ENST00000537332 1780 ntTSL 3 BASIC20.07■□□□□ 0.8
CLDN4O14493 DCAF8-211ENST00000475733 1426 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
CLDN4O14493 SPN-202ENST00000395389 1935 ntAPPRIS P2 TSL 1 (best) BASIC20.07■□□□□ 0.8
CLDN4O14493 ATP8A1-207ENST00000510289 2238 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
CLDN4O14493 IFNGR2-203ENST00000405436 1684 ntTSL 5 BASIC20.07■□□□□ 0.8
CLDN4O14493 ARX-201ENST00000379044 2876 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
CLDN4O14493 TRAPPC5-204ENST00000596148 5498 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
CLDN4O14493 LRIG1-201ENST00000273261 5273 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
CLDN4O14493 EYA2-203ENST00000357410 2465 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
CLDN4O14493 AC073343.2-201ENST00000413182 548 ntTSL 4 BASIC20.06■□□□□ 0.8
CLDN4O14493 CALM1-202ENST00000447653 1104 ntAPPRIS ALT1 TSL 2 BASIC20.06■□□□□ 0.8
CLDN4O14493 TPT1-AS1-211ENST00000520622 604 ntTSL 4 BASIC20.06■□□□□ 0.8
CLDN4O14493 LINC01942-201ENST00000521373 513 ntTSL 4 BASIC20.06■□□□□ 0.8
CLDN4O14493 C8orf82-202ENST00000524821 2476 ntAPPRIS P2 TSL 1 (best) BASIC20.06■□□□□ 0.8
CLDN4O14493 AC092384.1-201ENST00000378347 1812 ntTSL 2 BASIC20.06■□□□□ 0.8
CLDN4O14493 C11orf96-202ENST00000528572 1834 ntBASIC20.06■□□□□ 0.8
CLDN4O14493 ANKRD19P-205ENST00000473204 2370 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
CLDN4O14493 ITM2C-202ENST00000326427 2078 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
CLDN4O14493 PACRGL-227ENST00000513459 1773 ntTSL 5 BASIC20.06■□□□□ 0.8
CLDN4O14493 BICRA-204ENST00000614245 5697 ntAPPRIS ALT2 TSL 5 BASIC20.05■□□□□ 0.8
CLDN4O14493 RUNX2-210ENST00000576263 2256 ntTSL 5 BASIC20.05■□□□□ 0.8
CLDN4O14493 AC079328.2-202ENST00000560903 1410 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
CLDN4O14493 RHBDD2-201ENST00000006777 1802 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CLDN4O14493 ACYP2-201ENST00000303536 789 ntTSL 2 BASIC20.05■□□□□ 0.8
CLDN4O14493 FAXDC2-211ENST00000520968 558 ntTSL 4 BASIC20.05■□□□□ 0.8
CLDN4O14493 SLC25A45-206ENST00000526432 894 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
CLDN4O14493 RAB28-208ENST00000630951 1679 ntTSL 5 BASIC20.05■□□□□ 0.8
CLDN4O14493 FIZ1-201ENST00000221665 2660 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CLDN4O14493 DACT2-203ENST00000607983 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
CLDN4O14493 NFKBIL1-203ENST00000376148 1478 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CLDN4O14493 ZMYND11-210ENST00000403354 1664 ntTSL 5 BASIC20.04■□□□□ 0.8
CLDN4O14493 MEIS3-202ENST00000441740 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
CLDN4O14493 PFKFB3-216ENST00000625260 1752 ntAPPRIS ALT1 TSL 5 BASIC20.04■□□□□ 0.8
CLDN4O14493 MFF-207ENST00000409565 1548 ntTSL 2 BASIC20.04■□□□□ 0.8
CLDN4O14493 SLC35A2-205ENST00000376529 865 ntTSL 3 BASIC20.04■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 51.9 ms