Protein–RNA interactions for Protein: O00442

RTCA, RNA 3'-terminal phosphate cyclase, humanhuman

Known RBP Predictions only

Length 366 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTCAO00442 CDKN2A-210ENST00000530628 748 ntAPPRIS P1 TSL 5 BASIC20.36■□□□□ 0.85
RTCAO00442 TUNAR-203ENST00000554321 767 ntAPPRIS P1 TSL 4 BASIC20.36■□□□□ 0.85
RTCAO00442 AC012414.1-201ENST00000556676 535 ntBASIC20.36■□□□□ 0.85
RTCAO00442 AC005775.1-201ENST00000592413 850 ntTSL 5 BASIC20.36■□□□□ 0.85
RTCAO00442 CENPB-201ENST00000379751 2840 ntAPPRIS P1 BASIC20.36■□□□□ 0.85
RTCAO00442 NEURL4-202ENST00000399464 5200 ntAPPRIS P4 TSL 1 (best) BASIC20.36■□□□□ 0.85
RTCAO00442 TPST1-201ENST00000304842 2116 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
RTCAO00442 SLC35D3-201ENST00000331858 2359 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
RTCAO00442 SKI-201ENST00000378536 5613 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
RTCAO00442 CAPG-201ENST00000263867 1442 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
RTCAO00442 LAMP5-AS1-201ENST00000443469 1928 ntTSL 2 BASIC20.35■□□□□ 0.85
RTCAO00442 RFLNA-201ENST00000324038 2148 ntAPPRIS P2 TSL 2 BASIC20.35■□□□□ 0.85
RTCAO00442 RAPH1-210ENST00000453034 2394 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
RTCAO00442 ANO8-201ENST00000159087 4152 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
RTCAO00442 MFSD14C-208ENST00000637864 1802 ntAPPRIS ALT2 TSL 2 BASIC20.35■□□□□ 0.85
RTCAO00442 LAYN-201ENST00000375614 2066 ntAPPRIS P3 TSL 1 (best) BASIC20.35■□□□□ 0.85
RTCAO00442 PTPRM-211ENST00000580170 5941 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
RTCAO00442 URAD-201ENST00000332715 931 ntAPPRIS P1 TSL 5 BASIC20.35■□□□□ 0.85
RTCAO00442 LINC01167-201ENST00000423232 604 ntTSL 3 BASIC20.35■□□□□ 0.85
RTCAO00442 HERC2P4-206ENST00000568097 1062 ntTSL 5 BASIC20.35■□□□□ 0.85
RTCAO00442 TRAPPC6A-205ENST00000592647 514 ntTSL 2 BASIC20.35■□□□□ 0.85
RTCAO00442 AC010999.2-201ENST00000621974 596 ntTSL 2 BASIC20.35■□□□□ 0.85
RTCAO00442 AC018553.2-201ENST00000637770 1064 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
RTCAO00442 ZNF511-202ENST00000361518 1520 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
RTCAO00442 ANKRD28-201ENST00000399451 6564 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
RTCAO00442 ILDR2-206ENST00000528703 2446 ntAPPRIS ALT2 TSL 5 BASIC20.35■□□□□ 0.85
RTCAO00442 PCSK6-220ENST00000622483 3132 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
RTCAO00442 ALKAL2-204ENST00000403610 1389 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
RTCAO00442 GOLGA2P6-201ENST00000340929 2049 ntBASIC20.34■□□□□ 0.85
RTCAO00442 HLA-C-203ENST00000383329 1554 ntAPPRIS ALT2 BASIC20.34■□□□□ 0.85
RTCAO00442 MOGS-202ENST00000409065 2668 ntTSL 5 BASIC20.34■□□□□ 0.85
RTCAO00442 NAA35-202ENST00000376040 1797 ntTSL 2 BASIC20.34■□□□□ 0.85
RTCAO00442 VPS9D1-AS1-202ENST00000562866 1753 ntTSL 2 BASIC20.34■□□□□ 0.85
RTCAO00442 GCH1-202ENST00000395514 1977 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
RTCAO00442 AP006587.3-201ENST00000525742 1516 ntBASIC20.34■□□□□ 0.85
RTCAO00442 BX005040.4-201ENST00000637145 1518 ntBASIC20.34■□□□□ 0.85
RTCAO00442 FBXW11-203ENST00000393802 2181 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
RTCAO00442 PAQR6-202ENST00000335852 2117 ntTSL 2 BASIC20.34■□□□□ 0.85
RTCAO00442 P4HTM-202ENST00000383729 2127 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
RTCAO00442 ZNRF2P3-201ENST00000424200 374 ntBASIC20.34■□□□□ 0.85
RTCAO00442 ANKRD63-201ENST00000434396 1143 ntAPPRIS P1 BASIC20.34■□□□□ 0.85
RTCAO00442 STOML2-202ENST00000452248 1296 ntTSL 2 BASIC20.34■□□□□ 0.85
RTCAO00442 SH2B2-202ENST00000536178 2113 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
RTCAO00442 STOML2-205ENST00000619795 1293 ntTSL 3 BASIC20.34■□□□□ 0.85
RTCAO00442 POLR2E-214ENST00000619917 932 ntTSL 5 BASIC20.34■□□□□ 0.85
RTCAO00442 AC007375.3-201ENST00000600936 2314 ntBASIC20.34■□□□□ 0.85
RTCAO00442 ZDHHC7-203ENST00000564466 1488 ntTSL 5 BASIC20.34■□□□□ 0.85
RTCAO00442 MBNL3-202ENST00000370844 1643 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
RTCAO00442 PDE5A-201ENST00000264805 3020 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
RTCAO00442 IQSEC3-201ENST00000382841 2701 ntAPPRIS P3 TSL 2 BASIC20.33■□□□□ 0.85
RTCAO00442 C17orf74-202ENST00000574034 1287 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
RTCAO00442 HERC2P8-204ENST00000567073 1988 ntTSL 5 BASIC20.33■□□□□ 0.84
RTCAO00442 NABP2-202ENST00000341463 1411 ntAPPRIS P1 TSL 3 BASIC20.33■□□□□ 0.84
RTCAO00442 NABP2-203ENST00000380198 1775 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
RTCAO00442 AC003102.1-202ENST00000563394 1796 ntBASIC20.33■□□□□ 0.84
RTCAO00442 PFKFB3-216ENST00000625260 1752 ntAPPRIS ALT1 TSL 5 BASIC20.33■□□□□ 0.84
RTCAO00442 ATG4D-201ENST00000309469 1949 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
RTCAO00442 PHF10-202ENST00000366780 1589 ntAPPRIS ALT2 TSL 5 BASIC20.33■□□□□ 0.84
RTCAO00442 AC084757.3-201ENST00000558061 1943 ntTSL 3 BASIC20.33■□□□□ 0.84
RTCAO00442 DGKQ-201ENST00000273814 4636 ntAPPRIS P2 TSL 1 (best) BASIC20.33■□□□□ 0.84
RTCAO00442 ARRB2-201ENST00000269260 1895 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
RTCAO00442 DTWD2-203ENST00000510708 2307 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
RTCAO00442 MPST-204ENST00000404393 1329 ntTSL 5 BASIC20.32■□□□□ 0.84
RTCAO00442 VGF-202ENST00000445482 2477 ntAPPRIS P1 TSL 5 BASIC20.32■□□□□ 0.84
RTCAO00442 PRR7-201ENST00000323249 1480 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
RTCAO00442 NME4-201ENST00000219479 995 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
RTCAO00442 KRTAP17-1-201ENST00000334202 779 ntAPPRIS P1 BASIC20.32■□□□□ 0.84
RTCAO00442 NME4-202ENST00000382940 766 ntTSL 3 BASIC20.32■□□□□ 0.84
RTCAO00442 MOSPD3-203ENST00000393950 1191 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
RTCAO00442 PRSS22-203ENST00000571228 1037 ntTSL 2 BASIC20.32■□□□□ 0.84
RTCAO00442 NME4-211ENST00000620944 1193 ntTSL 2 BASIC20.32■□□□□ 0.84
RTCAO00442 LINC00969-219ENST00000453324 1439 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
RTCAO00442 C19orf12-201ENST00000323670 2464 ntAPPRIS P1 TSL 2 BASIC20.32■□□□□ 0.84
RTCAO00442 SPRTN-201ENST00000008440 1667 ntTSL 2 BASIC20.32■□□□□ 0.84
RTCAO00442 CLDN5-201ENST00000403084 2357 ntBASIC20.31■□□□□ 0.84
RTCAO00442 CCKBR-206ENST00000532715 1734 ntTSL 3 BASIC20.31■□□□□ 0.84
RTCAO00442 PCSK1N-201ENST00000218230 1050 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
RTCAO00442 RPL8-201ENST00000262584 1041 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
RTCAO00442 FBXL14-201ENST00000339235 2111 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
RTCAO00442 TSPY4-201ENST00000383008 1143 ntAPPRIS ALT2 TSL 5 BASIC20.31■□□□□ 0.84
RTCAO00442 NT5C3AP1-201ENST00000394500 1012 ntBASIC20.31■□□□□ 0.84
RTCAO00442 AP2S1-203ENST00000593442 636 ntTSL 2 BASIC20.31■□□□□ 0.84
RTCAO00442 AL354811.1-201ENST00000610286 706 ntBASIC20.31■□□□□ 0.84
RTCAO00442 ATP10A-207ENST00000619904 988 ntTSL 5 BASIC20.31■□□□□ 0.84
RTCAO00442 FAM66C-208ENST00000541558 2087 ntTSL 2 BASIC20.31■□□□□ 0.84
RTCAO00442 CBWD6-201ENST00000377391 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
RTCAO00442 B4GALNT1-203ENST00000449184 1633 ntTSL 2 BASIC20.31■□□□□ 0.84
RTCAO00442 NARF-202ENST00000345415 1487 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
RTCAO00442 LRP5L-203ENST00000444995 1714 ntAPPRIS ALT2 TSL 5 BASIC20.3■□□□□ 0.84
RTCAO00442 ONECUT3-201ENST00000382349 8318 ntAPPRIS P1 TSL 5 BASIC20.3■□□□□ 0.84
RTCAO00442 LOXL1-201ENST00000261921 2351 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
RTCAO00442 TBL1Y-202ENST00000355162 2376 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
RTCAO00442 PSIP1-201ENST00000380715 1966 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
RTCAO00442 PABPC1L2A-201ENST00000373519 2237 ntAPPRIS P1 BASIC20.3■□□□□ 0.84
RTCAO00442 ZNF467-201ENST00000302017 2553 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
RTCAO00442 NXT1-201ENST00000254998 1123 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
RTCAO00442 FAM219A-202ENST00000379078 770 ntTSL 3 BASIC20.3■□□□□ 0.84
RTCAO00442 FDX2-202ENST00000393708 1012 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
RTCAO00442 JARID2-AS1-201ENST00000441978 455 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
RTCAO00442 PRKCQ-AS1-204ENST00000455810 920 ntTSL 2 BASIC20.3■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 23.6 ms