Protein–RNA interactions for Protein: O00300

TNFRSF11B, Tumor necrosis factor receptor superfamily member 11B, humanhuman

Predictions only

Length 401 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF11BO00300 AC084116.4-201ENST00000524320 484 ntTSL 2 BASIC19.7■□□□□ 0.74
TNFRSF11BO00300 VRK2-201ENST00000340157 1888 ntAPPRIS P3 TSL 1 (best) BASIC19.7■□□□□ 0.74
TNFRSF11BO00300 PPP3CC-203ENST00000397775 2094 ntTSL 2 BASIC19.7■□□□□ 0.74
TNFRSF11BO00300 HFE2-202ENST00000357836 2123 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
TNFRSF11BO00300 YBX3-202ENST00000279550 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
TNFRSF11BO00300 NYAP1-202ENST00000454988 2777 ntTSL 5 BASIC19.7■□□□□ 0.74
TNFRSF11BO00300 ATP11C-203ENST00000370557 6924 ntAPPRIS ALT2 TSL 5 BASIC19.7■□□□□ 0.74
TNFRSF11BO00300 FAM3A-208ENST00000419205 1763 ntTSL 2 BASIC19.7■□□□□ 0.74
TNFRSF11BO00300 MIS18A-201ENST00000290130 1575 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
TNFRSF11BO00300 METTL1-202ENST00000324871 2066 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
TNFRSF11BO00300 NR2F1-AS1-210ENST00000606739 1431 ntTSL 2 BASIC19.69■□□□□ 0.74
TNFRSF11BO00300 RASSF1-203ENST00000359365 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC19.69■□□□□ 0.74
TNFRSF11BO00300 RMI2-201ENST00000312499 1457 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
TNFRSF11BO00300 CCKBR-206ENST00000532715 1734 ntTSL 3 BASIC19.69■□□□□ 0.74
TNFRSF11BO00300 MDK-203ENST00000395566 828 ntAPPRIS P2 TSL 1 (best) BASIC19.69■□□□□ 0.74
TNFRSF11BO00300 IPO9-AS1-201ENST00000413035 839 ntTSL 3 BASIC19.69■□□□□ 0.74
TNFRSF11BO00300 MYD88-205ENST00000424893 1279 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
TNFRSF11BO00300 RBKS-201ENST00000302188 1973 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
TNFRSF11BO00300 ZDHHC14-203ENST00000359775 7380 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
TNFRSF11BO00300 HLA-C-203ENST00000383329 1554 ntAPPRIS ALT2 BASIC19.69■□□□□ 0.74
TNFRSF11BO00300 TLE3-216ENST00000559191 1575 ntTSL 5 BASIC19.69■□□□□ 0.74
TNFRSF11BO00300 UNC93B1-201ENST00000227471 2316 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
TNFRSF11BO00300 RUNX3-202ENST00000338888 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
TNFRSF11BO00300 DYM-203ENST00000442713 2147 ntTSL 2 BASIC19.69■□□□□ 0.74
TNFRSF11BO00300 OAS3-205ENST00000548514 1392 ntTSL 2 BASIC19.69■□□□□ 0.74
TNFRSF11BO00300 COL13A1-202ENST00000357811 2991 ntAPPRIS ALT2 TSL 5 BASIC19.68■□□□□ 0.74
TNFRSF11BO00300 ARRDC1-AS1-201ENST00000371417 1409 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
TNFRSF11BO00300 ZNF510-203ENST00000375231 5616 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
TNFRSF11BO00300 TNIP1-205ENST00000518977 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
TNFRSF11BO00300 GPR162-201ENST00000311268 2768 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
TNFRSF11BO00300 RASEF-202ENST00000376447 5576 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
TNFRSF11BO00300 XBP1-207ENST00000611155 1794 ntTSL 5 BASIC19.68■□□□□ 0.74
TNFRSF11BO00300 RBM34-201ENST00000408888 2054 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
TNFRSF11BO00300 BRSK2-201ENST00000308219 4089 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
TNFRSF11BO00300 MANEAL-202ENST00000373045 2685 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
TNFRSF11BO00300 HSD17B14-201ENST00000263278 1238 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
TNFRSF11BO00300 BAD-203ENST00000394532 1157 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
TNFRSF11BO00300 NEK3-208ENST00000618534 2414 ntAPPRIS P2 TSL 5 BASIC19.68■□□□□ 0.74
TNFRSF11BO00300 SYNGR2-203ENST00000588282 1553 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
TNFRSF11BO00300 ALDH6A1-201ENST00000350259 1869 ntAPPRIS ALT2 TSL 2 BASIC19.68■□□□□ 0.74
TNFRSF11BO00300 JADE2-204ENST00000402835 2797 ntTSL 5 BASIC19.68■□□□□ 0.74
TNFRSF11BO00300 BX005266.2-202ENST00000446626 2245 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
TNFRSF11BO00300 RNF38-204ENST00000357058 5254 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
TNFRSF11BO00300 KIRREL2-201ENST00000262625 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
TNFRSF11BO00300 FAM3A-202ENST00000359889 1712 ntAPPRIS P1 TSL 2 BASIC19.68■□□□□ 0.74
TNFRSF11BO00300 FNDC10-201ENST00000422725 2085 ntAPPRIS P1 BASIC19.67■□□□□ 0.74
TNFRSF11BO00300 STX4-202ENST00000394998 1498 ntTSL 2 BASIC19.67■□□□□ 0.74
TNFRSF11BO00300 NAPEPLD-208ENST00000427257 1822 ntAPPRIS P1 TSL 2 BASIC19.67■□□□□ 0.74
TNFRSF11BO00300 UBE2K-201ENST00000261427 5245 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
TNFRSF11BO00300 OXCT2P1-201ENST00000447263 1535 ntBASIC19.67■□□□□ 0.74
TNFRSF11BO00300 FIP1L1-201ENST00000306932 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
TNFRSF11BO00300 LRP11-202ENST00000367368 1042 ntTSL 2 BASIC19.67■□□□□ 0.74
TNFRSF11BO00300 AC239859.2-201ENST00000444165 318 ntBASIC19.67■□□□□ 0.74
TNFRSF11BO00300 pRNA.6-201ENST00000610482 90 ntBASIC19.67■□□□□ 0.74
TNFRSF11BO00300 pRNA.5-201ENST00000612139 90 ntBASIC19.67■□□□□ 0.74
TNFRSF11BO00300 pRNA.11-201ENST00000618423 90 ntBASIC19.67■□□□□ 0.74
TNFRSF11BO00300 pRNA.13-201ENST00000619112 90 ntBASIC19.67■□□□□ 0.74
TNFRSF11BO00300 AC018553.2-201ENST00000637770 1064 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
TNFRSF11BO00300 NDUFAF3-202ENST00000326925 2012 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
TNFRSF11BO00300 DNAJC7-203ENST00000457167 2022 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
TNFRSF11BO00300 ERI3-201ENST00000372257 1684 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
TNFRSF11BO00300 TTC39C-202ENST00000317571 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
TNFRSF11BO00300 TMUB1-201ENST00000297533 1353 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
TNFRSF11BO00300 JPT1-206ENST00000476258 2289 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
TNFRSF11BO00300 RAB11FIP4-211ENST00000621161 8628 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
TNFRSF11BO00300 GABRA2-214ENST00000515082 2366 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
TNFRSF11BO00300 NPNT-204ENST00000453617 2419 ntAPPRIS ALT1 TSL 2 BASIC19.66■□□□□ 0.74
TNFRSF11BO00300 MFSD7-209ENST00000515118 1556 ntTSL 5 BASIC19.66■□□□□ 0.74
TNFRSF11BO00300 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC19.66■□□□□ 0.74
TNFRSF11BO00300 CAMK2B-216ENST00000440254 2097 ntAPPRIS P4 TSL 1 (best) BASIC19.66■□□□□ 0.74
TNFRSF11BO00300 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
TNFRSF11BO00300 LRR1-201ENST00000298288 1745 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
TNFRSF11BO00300 SPAG16-201ENST00000272898 1059 ntTSL 5 BASIC19.66■□□□□ 0.74
TNFRSF11BO00300 C2orf82-201ENST00000331342 465 ntAPPRIS P2 TSL 1 (best) BASIC19.66■□□□□ 0.74
TNFRSF11BO00300 FAM173A-207ENST00000569529 1052 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
TNFRSF11BO00300 DNAJB5-201ENST00000312316 2391 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
TNFRSF11BO00300 C10orf55-202ENST00000412307 2360 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
TNFRSF11BO00300 HES5-201ENST00000378453 1306 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
TNFRSF11BO00300 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
TNFRSF11BO00300 NRXN2-201ENST00000265459 6621 ntAPPRIS P3 TSL 5 BASIC19.66■□□□□ 0.74
TNFRSF11BO00300 SOX4-201ENST00000244745 5852 ntAPPRIS P1 BASIC19.66■□□□□ 0.74
TNFRSF11BO00300 TMED4-201ENST00000289577 2203 ntTSL 2 BASIC19.66■□□□□ 0.74
TNFRSF11BO00300 GAS2-202ENST00000454584 2286 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
TNFRSF11BO00300 CEL-201ENST00000372080 2384 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
TNFRSF11BO00300 UBR2-203ENST00000372903 2423 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
TNFRSF11BO00300 TRMT2A-204ENST00000439169 2473 ntTSL 5 BASIC19.65■□□□□ 0.74
TNFRSF11BO00300 TPCN2-209ENST00000637504 2736 ntTSL 5 BASIC19.65■□□□□ 0.74
TNFRSF11BO00300 HERC2P8-204ENST00000567073 1988 ntTSL 5 BASIC19.65■□□□□ 0.74
TNFRSF11BO00300 DMRTA2-202ENST00000418121 2840 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
TNFRSF11BO00300 CAMKK2-208ENST00000412367 2006 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
TNFRSF11BO00300 RAET1E-AS1-203ENST00000606915 1210 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
TNFRSF11BO00300 AC068587.7-201ENST00000641602 218 ntBASIC19.65■□□□□ 0.74
TNFRSF11BO00300 ZNF584-201ENST00000306910 2332 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
TNFRSF11BO00300 GFRA4-201ENST00000290417 1427 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
TNFRSF11BO00300 EEF1D-203ENST00000419152 1452 ntAPPRIS ALT2 TSL 5 BASIC19.65■□□□□ 0.74
TNFRSF11BO00300 KMT2B-201ENST00000420124 8469 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
TNFRSF11BO00300 KLC2-207ENST00000421552 2721 ntTSL 5 BASIC19.65■□□□□ 0.74
TNFRSF11BO00300 PRR16-202ENST00000407149 1747 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
TNFRSF11BO00300 EPHX3-201ENST00000221730 1822 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
TNFRSF11BO00300 C10orf91-202ENST00000392630 1846 ntTSL 2 BASIC19.65■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 22.2 ms