Protein–RNA interactions for Protein: H3BM21

Integrin beta (Fragment), humanhuman

Predictions only

Length 787 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H3BM21 CCNE1-201ENST00000262643 2043 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
H3BM21 PNMA6A-201ENST00000421798 2209 ntAPPRIS P1 TSL 2 BASIC21.24■□□□□ 0.99
H3BM21 AC080112.2-201ENST00000578774 2094 ntTSL 4 BASIC21.24■□□□□ 0.99
H3BM21 MMP24-201ENST00000246186 4414 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
H3BM21 SLC39A4-202ENST00000301305 2174 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
H3BM21 CACNA1H-202ENST00000358590 8069 ntAPPRIS ALT2 TSL 5 BASIC21.23■□□□□ 0.99
H3BM21 NEK6-214ENST00000545174 2573 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
H3BM21 EMC7-201ENST00000256545 1155 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
H3BM21 ANKRD63-201ENST00000434396 1143 ntAPPRIS P1 BASIC21.23■□□□□ 0.99
H3BM21 AP001363.2-201ENST00000538101 391 ntTSL 3 BASIC21.23■□□□□ 0.99
H3BM21 TK2-208ENST00000545043 1120 ntTSL 2 BASIC21.23■□□□□ 0.99
H3BM21 AL512625.3-202ENST00000591993 1091 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
H3BM21 VIM-AS1-202ENST00000605833 918 ntTSL 3 BASIC21.23■□□□□ 0.99
H3BM21 ADAD2-201ENST00000268624 2283 ntAPPRIS P3 TSL 2 BASIC21.23■□□□□ 0.99
H3BM21 TOP1MT-201ENST00000329245 1958 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
H3BM21 NIPSNAP1-201ENST00000216121 2237 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
H3BM21 RYK-208ENST00000620660 2942 ntAPPRIS P3 TSL 1 (best) BASIC21.22■□□□□ 0.99
H3BM21 GNB2-201ENST00000303210 1878 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
H3BM21 MMEL1-206ENST00000502556 1943 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
H3BM21 AC079834.2-201ENST00000609776 1949 ntBASIC21.22■□□□□ 0.99
H3BM21 ABHD12B-201ENST00000337334 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC21.22■□□□□ 0.99
H3BM21 IL15RA-207ENST00000397250 584 ntTSL 2 BASIC21.22■□□□□ 0.99
H3BM21 RAMP1-203ENST00000404910 857 ntTSL 2 BASIC21.22■□□□□ 0.99
H3BM21 AC026185.1-201ENST00000445748 174 ntBASIC21.22■□□□□ 0.99
H3BM21 ATP6V0B-205ENST00000472174 1298 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
H3BM21 IL15RA-215ENST00000528354 1037 ntTSL 2 BASIC21.22■□□□□ 0.99
H3BM21 TMEM230-210ENST00000612323 1231 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
H3BM21 IL15RA-220ENST00000620345 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC21.22■□□□□ 0.99
H3BM21 RAB1A-202ENST00000409751 1333 ntTSL 5 BASIC21.22■□□□□ 0.99
H3BM21 VDAC1-203ENST00000395047 1873 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
H3BM21 CAPN12-212ENST00000601953 2381 ntTSL 5 BASIC21.22■□□□□ 0.99
H3BM21 ASAP2-201ENST00000281419 5712 ntAPPRIS P3 TSL 1 (best) BASIC21.22■□□□□ 0.99
H3BM21 CDR2-201ENST00000268383 2702 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
H3BM21 SLC30A2-201ENST00000374276 2494 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
H3BM21 PCSK6-220ENST00000622483 3132 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
H3BM21 GMPPA-201ENST00000313597 1544 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
H3BM21 ARL2BP-201ENST00000219204 2130 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
H3BM21 TMEM54-202ENST00000373463 999 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
H3BM21 CDCA4P2-201ENST00000441182 718 ntBASIC21.21■□□□□ 0.99
H3BM21 ZNF717-203ENST00000477374 1169 ntTSL 2 BASIC21.21■□□□□ 0.99
H3BM21 Z97986.1-201ENST00000565879 476 ntTSL 5 BASIC21.21■□□□□ 0.99
H3BM21 DENND1A-201ENST00000373618 3003 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
H3BM21 CELF5-201ENST00000292672 1854 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
H3BM21 LINC00526-201ENST00000581067 1875 ntBASIC21.21■□□□□ 0.99
H3BM21 HSPB2-201ENST00000304298 1335 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
H3BM21 C14orf80-201ENST00000329886 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
H3BM21 ARX-201ENST00000379044 2876 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
H3BM21 KPTN-201ENST00000338134 1691 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
H3BM21 DPH1-203ENST00000570477 1747 ntAPPRIS ALT2 TSL 2 BASIC21.21■□□□□ 0.99
H3BM21 OR7E47P-201ENST00000546390 1422 ntBASIC21.21■□□□□ 0.99
H3BM21 AC242852.2-201ENST00000615738 1807 ntBASIC21.2■□□□□ 0.98
H3BM21 CCM2-206ENST00000474617 1532 ntTSL 5 BASIC21.2■□□□□ 0.98
H3BM21 AC092490.1-203ENST00000514568 1972 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
H3BM21 LIN7B-201ENST00000221459 755 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
H3BM21 CDKN3-204ENST00000442975 727 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
H3BM21 ATPIF1-204ENST00000497986 599 ntTSL 2 BASIC21.2■□□□□ 0.98
H3BM21 SPI1-203ENST00000533030 661 ntTSL 2 BASIC21.2■□□□□ 0.98
H3BM21 LINC01976-201ENST00000565120 434 ntTSL 2 BASIC21.2■□□□□ 0.98
H3BM21 HAS1-203ENST00000594621 760 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
H3BM21 POU5F1-209ENST00000638788 369 ntTSL 5 BASIC21.2■□□□□ 0.98
H3BM21 SNHG7-201ENST00000414282 2357 ntTSL 2 BASIC21.2■□□□□ 0.98
H3BM21 IER2-201ENST00000292433 2085 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
H3BM21 FAM102B-201ENST00000370035 5600 ntAPPRIS P2 TSL 1 (best) BASIC21.2■□□□□ 0.98
H3BM21 GAS2L1-206ENST00000610653 2238 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
H3BM21 TBC1D22A-206ENST00000407381 1949 ntTSL 5 BASIC21.19■□□□□ 0.98
H3BM21 RAB3A-201ENST00000222256 1528 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
H3BM21 DPP7-201ENST00000371579 1590 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
H3BM21 DACT2-203ENST00000607983 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
H3BM21 GAL3ST1-202ENST00000401975 1791 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
H3BM21 LARP6-202ENST00000344870 527 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
H3BM21 HLA-L-209ENST00000420110 1011 ntBASIC21.19■□□□□ 0.98
H3BM21 ABHD14A-202ENST00000458031 1113 ntTSL 5 BASIC21.19■□□□□ 0.98
H3BM21 NDUFA6-AS1-207ENST00000595777 833 ntTSL 5 BASIC21.19■□□□□ 0.98
H3BM21 GPRC5B-210ENST00000569847 1830 ntAPPRIS P2 TSL 2 BASIC21.19■□□□□ 0.98
H3BM21 LRP5-201ENST00000294304 5159 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
H3BM21 C19orf67-203ENST00000548523 1427 ntAPPRIS P2 TSL 5 BASIC21.19■□□□□ 0.98
H3BM21 BEST2-204ENST00000553030 2000 ntAPPRIS P1 TSL 5 BASIC21.19■□□□□ 0.98
H3BM21 TPM4-201ENST00000300933 2666 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
H3BM21 TPRN-202ENST00000409012 2718 ntAPPRIS P2 TSL 1 (best) BASIC21.19■□□□□ 0.98
H3BM21 CNEP1R1-202ENST00000427478 2117 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
H3BM21 PDE10A-205ENST00000616273 2118 ntTSL 2 BASIC21.19■□□□□ 0.98
H3BM21 RASGRP2-207ENST00000377497 2221 ntAPPRIS P2 TSL 1 (best) BASIC21.19■□□□□ 0.98
H3BM21 KAT5-201ENST00000341318 2296 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
H3BM21 UBE2S-201ENST00000264552 2548 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
H3BM21 FMR1-AS1-202ENST00000596112 1845 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
H3BM21 AL117328.2-201ENST00000624617 1940 ntBASIC21.18■□□□□ 0.98
H3BM21 RORB-AS1-201ENST00000417576 1178 ntTSL 5 BASIC21.18■□□□□ 0.98
H3BM21 YIF1A-205ENST00000471387 854 ntTSL 5 BASIC21.18■□□□□ 0.98
H3BM21 TRIQK-221ENST00000524107 737 ntAPPRIS P1 TSL 3 BASIC21.18■□□□□ 0.98
H3BM21 MCRIP1-204ENST00000570507 765 ntTSL 2 BASIC21.18■□□□□ 0.98
H3BM21 MCRIP1-208ENST00000575061 618 ntTSL 5 BASIC21.18■□□□□ 0.98
H3BM21 KLK9-202ENST00000594211 754 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
H3BM21 AC012313.6-201ENST00000599889 790 ntTSL 3 BASIC21.18■□□□□ 0.98
H3BM21 MDK-213ENST00000617138 635 ntTSL 2 BASIC21.18■□□□□ 0.98
H3BM21 HACD1-202ENST00000361271 2237 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
H3BM21 C3orf18-205ENST00000441239 1490 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
H3BM21 RDX-204ENST00000528498 2511 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
H3BM21 WDR86-207ENST00000621812 1542 ntTSL 5 BASIC21.18■□□□□ 0.98
H3BM21 C22orf34-203ENST00000405854 1593 ntTSL 5 BASIC21.18■□□□□ 0.98
H3BM21 MFSD7-209ENST00000515118 1556 ntTSL 5 BASIC21.18■□□□□ 0.98
Retrieved 100 of 98,524 protein–RNA pairs in 36.4 ms