Protein–RNA interactions for Protein: D6RIA3

LOC285556, Uncharacterized protein, humanhuman

Predictions only

Length 1,793 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LOC285556D6RIA3 LYRM1-205ENST00000562740 931 ntTSL 1 (best) BASIC24.72■■□□□ 1.55
LOC285556D6RIA3 CIRBP-246ENST00000628979 1043 ntTSL 2 BASIC24.72■■□□□ 1.55
LOC285556D6RIA3 USP21-202ENST00000368001 2095 ntTSL 1 (best) BASIC24.72■■□□□ 1.55
LOC285556D6RIA3 SMAD1-201ENST00000302085 1966 ntAPPRIS P1 TSL 1 (best) BASIC24.72■■□□□ 1.55
LOC285556D6RIA3 ZC3H14-202ENST00000302216 2560 ntTSL 1 (best) BASIC24.72■■□□□ 1.55
LOC285556D6RIA3 IFNGR2-203ENST00000405436 1684 ntTSL 5 BASIC24.71■■□□□ 1.55
LOC285556D6RIA3 TMSB15B-202ENST00000436583 2186 ntAPPRIS P1 TSL 1 (best) BASIC24.71■■□□□ 1.55
LOC285556D6RIA3 TARBP2-201ENST00000266987 1867 ntAPPRIS P1 TSL 1 (best) BASIC24.71■■□□□ 1.55
LOC285556D6RIA3 MMP23B-201ENST00000356026 1326 ntAPPRIS P1 TSL 1 (best) BASIC24.71■■□□□ 1.55
LOC285556D6RIA3 AL390816.2-201ENST00000554252 737 ntTSL 3 BASIC24.71■■□□□ 1.55
LOC285556D6RIA3 GPX1-204ENST00000620890 897 ntAPPRIS ALT2 TSL 5 BASIC24.71■■□□□ 1.55
LOC285556D6RIA3 ASCL2-201ENST00000331289 1852 ntAPPRIS P1 TSL 1 (best) BASIC24.71■■□□□ 1.55
LOC285556D6RIA3 LRRC34-201ENST00000446859 1718 ntAPPRIS ALT2 TSL 2 BASIC24.7■■□□□ 1.55
LOC285556D6RIA3 MIF4GD-202ENST00000325102 1306 ntAPPRIS P1 TSL 2 BASIC24.7■■□□□ 1.55
LOC285556D6RIA3 KATNAL2-208ENST00000592005 1348 ntTSL 1 (best) BASIC24.7■■□□□ 1.55
LOC285556D6RIA3 CPLX1-203ENST00000505203 2011 ntTSL 2 BASIC24.7■■□□□ 1.55
LOC285556D6RIA3 GUK1-209ENST00000366730 937 ntAPPRIS P3 TSL 3 BASIC24.7■■□□□ 1.55
LOC285556D6RIA3 KHDRBS1-204ENST00000492989 1215 ntTSL 1 (best) BASIC24.7■■□□□ 1.55
LOC285556D6RIA3 AP000785.1-201ENST00000527314 613 ntTSL 4 BASIC24.7■■□□□ 1.55
LOC285556D6RIA3 MFSD7-201ENST00000322224 2123 ntAPPRIS P3 TSL 1 (best) BASIC24.7■■□□□ 1.54
LOC285556D6RIA3 PEBP1-201ENST00000261313 1697 ntAPPRIS P1 TSL 1 (best) BASIC24.7■■□□□ 1.54
LOC285556D6RIA3 FAIM-201ENST00000338446 1622 ntTSL 5 BASIC24.7■■□□□ 1.54
LOC285556D6RIA3 SRPK3-204ENST00000370108 1863 ntAPPRIS ALT2 TSL 5 BASIC24.7■■□□□ 1.54
LOC285556D6RIA3 CLN3-240ENST00000631023 1586 ntTSL 5 BASIC24.7■■□□□ 1.54
LOC285556D6RIA3 C2orf82-203ENST00000409533 561 ntAPPRIS P2 TSL 4 BASIC24.7■■□□□ 1.54
LOC285556D6RIA3 LINC02199-202ENST00000510067 1008 ntTSL 2 BASIC24.7■■□□□ 1.54
LOC285556D6RIA3 TRIM35-203ENST00000521253 1215 ntTSL 1 (best) BASIC24.7■■□□□ 1.54
LOC285556D6RIA3 ZNF324-202ENST00000535298 1006 ntTSL 5 BASIC24.7■■□□□ 1.54
LOC285556D6RIA3 AC069236.1-201ENST00000604339 616 ntBASIC24.7■■□□□ 1.54
LOC285556D6RIA3 PTP4A3-203ENST00000520105 1866 ntTSL 5 BASIC24.69■■□□□ 1.54
LOC285556D6RIA3 MFSD3-201ENST00000301327 1548 ntAPPRIS P1 TSL 1 (best) BASIC24.69■■□□□ 1.54
LOC285556D6RIA3 IPO13-201ENST00000372339 1201 ntTSL 2 BASIC24.69■■□□□ 1.54
LOC285556D6RIA3 TMEM179B-205ENST00000533861 797 ntTSL 5 BASIC24.69■■□□□ 1.54
LOC285556D6RIA3 GGA2-211ENST00000567468 1713 ntTSL 2 BASIC24.69■■□□□ 1.54
LOC285556D6RIA3 CCDC7-201ENST00000277657 1899 ntAPPRIS P2 TSL 1 (best) BASIC24.69■■□□□ 1.54
LOC285556D6RIA3 KRT16P2-201ENST00000414673 1423 ntBASIC24.69■■□□□ 1.54
LOC285556D6RIA3 FASTK-217ENST00000540185 1609 ntTSL 5 BASIC24.69■■□□□ 1.54
LOC285556D6RIA3 CLDN5-203ENST00000413119 1760 ntTSL 2 BASIC24.68■■□□□ 1.54
LOC285556D6RIA3 TMEM176B-203ENST00000434545 1303 ntAPPRIS P1 TSL 1 (best) BASIC24.68■■□□□ 1.54
LOC285556D6RIA3 PRR7-202ENST00000502922 1345 ntAPPRIS P1 TSL 2 BASIC24.68■■□□□ 1.54
LOC285556D6RIA3 CBY3-201ENST00000376974 785 ntAPPRIS P1 TSL 2 BASIC24.68■■□□□ 1.54
LOC285556D6RIA3 POLR2J-202ENST00000393794 784 ntTSL 1 (best) BASIC24.68■■□□□ 1.54
LOC285556D6RIA3 AL512625.2-201ENST00000417533 625 ntBASIC24.68■■□□□ 1.54
LOC285556D6RIA3 LINC01637-201ENST00000444039 684 ntTSL 2 BASIC24.68■■□□□ 1.54
LOC285556D6RIA3 DET1-205ENST00000558413 583 ntTSL 4 BASIC24.68■■□□□ 1.54
LOC285556D6RIA3 JADE2-211ENST00000612830 1251 ntTSL 1 (best) BASIC24.68■■□□□ 1.54
LOC285556D6RIA3 SNRK-203ENST00000437827 1995 ntTSL 2 BASIC24.68■■□□□ 1.54
LOC285556D6RIA3 FASTK-212ENST00000482571 1764 ntTSL 1 (best) BASIC24.68■■□□□ 1.54
LOC285556D6RIA3 AC093323.1-202ENST00000635031 2045 ntBASIC24.68■■□□□ 1.54
LOC285556D6RIA3 BX276092.2-201ENST00000417668 665 ntBASIC24.67■■□□□ 1.54
LOC285556D6RIA3 ATPIF1-203ENST00000468425 539 ntTSL 2 BASIC24.67■■□□□ 1.54
LOC285556D6RIA3 RHEB-204ENST00000472642 900 ntTSL 3 BASIC24.67■■□□□ 1.54
LOC285556D6RIA3 C17orf107-202ENST00000521575 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC24.67■■□□□ 1.54
LOC285556D6RIA3 ETHE1-205ENST00000600651 1052 ntTSL 1 (best) BASIC24.67■■□□□ 1.54
LOC285556D6RIA3 FP565260.3-201ENST00000612610 1162 ntAPPRIS P5 TSL 1 (best) BASIC24.67■■□□□ 1.54
LOC285556D6RIA3 EML2-209ENST00000587152 2763 ntAPPRIS ALT2 TSL 2 BASIC24.67■■□□□ 1.54
LOC285556D6RIA3 RBM17P2-201ENST00000616397 1405 ntBASIC24.67■■□□□ 1.54
LOC285556D6RIA3 POLDIP2-201ENST00000540200 2121 ntAPPRIS P1 TSL 1 (best) BASIC24.67■■□□□ 1.54
LOC285556D6RIA3 HSD11B1L-201ENST00000301382 1457 ntTSL 1 (best) BASIC24.67■■□□□ 1.54
LOC285556D6RIA3 TOX2-201ENST00000341197 1880 ntAPPRIS P1 TSL 2 BASIC24.67■■□□□ 1.54
LOC285556D6RIA3 NAT16-202ENST00000443096 1286 ntTSL 1 (best) BASIC24.67■■□□□ 1.54
LOC285556D6RIA3 TMEM9-209ENST00000485839 938 ntAPPRIS P3 TSL 2 BASIC24.67■■□□□ 1.54
LOC285556D6RIA3 ISCU-212ENST00000547005 795 ntTSL 3 BASIC24.67■■□□□ 1.54
LOC285556D6RIA3 AL162412.1-201ENST00000567129 965 ntBASIC24.67■■□□□ 1.54
LOC285556D6RIA3 PLEKHJ1-205ENST00000587394 937 ntTSL 2 BASIC24.67■■□□□ 1.54
LOC285556D6RIA3 C19orf25-213ENST00000592872 1287 ntAPPRIS P1 TSL 2 BASIC24.67■■□□□ 1.54
LOC285556D6RIA3 AL772284.2-201ENST00000620151 1147 ntAPPRIS P1 TSL 5 BASIC24.67■■□□□ 1.54
LOC285556D6RIA3 AC034102.6-201ENST00000550947 559 ntTSL 4 BASIC24.66■■□□□ 1.54
LOC285556D6RIA3 FAM219B-212ENST00000565772 1249 ntTSL 1 (best) BASIC24.66■■□□□ 1.54
LOC285556D6RIA3 PTMS-207ENST00000619580 1150 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
LOC285556D6RIA3 PRSS56-201ENST00000449534 2157 ntAPPRIS ALT2 TSL 5 BASIC24.66■■□□□ 1.54
LOC285556D6RIA3 PRSS56-203ENST00000617714 2158 ntAPPRIS P2 TSL 5 BASIC24.66■■□□□ 1.54
LOC285556D6RIA3 FMR1-AS1-201ENST00000594922 2005 ntTSL 1 (best) BASIC24.66■■□□□ 1.54
LOC285556D6RIA3 C1orf122-202ENST00000373043 2229 ntAPPRIS ALT2 TSL 1 (best) BASIC24.66■■□□□ 1.54
LOC285556D6RIA3 RASGRP2-207ENST00000377497 2221 ntAPPRIS P2 TSL 1 (best) BASIC24.66■■□□□ 1.54
LOC285556D6RIA3 MMP23B-202ENST00000378675 1309 ntTSL 1 (best) BASIC24.66■■□□□ 1.54
LOC285556D6RIA3 ACOT8-201ENST00000217455 1168 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
LOC285556D6RIA3 SDHC-201ENST00000342751 1127 ntTSL 1 (best) BASIC24.65■■□□□ 1.54
LOC285556D6RIA3 CUEDC2-201ENST00000369937 1191 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
LOC285556D6RIA3 DGCR6L-202ENST00000405465 962 ntTSL 3 BASIC24.65■■□□□ 1.54
LOC285556D6RIA3 DUSP5P2-201ENST00000426873 1033 ntBASIC24.65■■□□□ 1.54
LOC285556D6RIA3 RPS2P52-201ENST00000469610 820 ntBASIC24.65■■□□□ 1.54
LOC285556D6RIA3 CIRBP-211ENST00000586773 942 ntAPPRIS ALT1 TSL 2 BASIC24.65■■□□□ 1.54
LOC285556D6RIA3 TMEM185A-208ENST00000611119 2662 ntTSL 2 BASIC24.65■■□□□ 1.54
LOC285556D6RIA3 NEU4-204ENST00000405370 1907 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
LOC285556D6RIA3 ZNF784-201ENST00000325351 2021 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
LOC285556D6RIA3 CAPN10-202ENST00000270364 1267 ntTSL 2 BASIC24.65■■□□□ 1.54
LOC285556D6RIA3 MAL-201ENST00000309988 1112 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
LOC285556D6RIA3 CD58-201ENST00000369487 892 ntAPPRIS ALT2 TSL 1 (best) BASIC24.65■■□□□ 1.54
LOC285556D6RIA3 CD58-202ENST00000369489 1098 ntAPPRIS P3 TSL 1 (best) BASIC24.65■■□□□ 1.54
LOC285556D6RIA3 OGFR-204ENST00000621591 1194 ntTSL 5 BASIC24.65■■□□□ 1.54
LOC285556D6RIA3 SLC35F4-206ENST00000556826 1908 ntAPPRIS P1 TSL 5 BASIC24.64■■□□□ 1.54
LOC285556D6RIA3 DHRS2-202ENST00000344777 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC24.64■■□□□ 1.54
LOC285556D6RIA3 WDR86-207ENST00000621812 1542 ntTSL 5 BASIC24.64■■□□□ 1.54
LOC285556D6RIA3 AC087742.1-201ENST00000575880 1738 ntBASIC24.64■■□□□ 1.54
LOC285556D6RIA3 AL391244.2-201ENST00000428932 543 ntTSL 2 BASIC24.64■■□□□ 1.53
LOC285556D6RIA3 AKAIN1-201ENST00000434239 575 ntAPPRIS P1 TSL 2 BASIC24.64■■□□□ 1.53
LOC285556D6RIA3 RNF146-206ENST00000480444 843 ntTSL 2 BASIC24.64■■□□□ 1.53
LOC285556D6RIA3 TPT1-AS1-210ENST00000520590 873 ntTSL 5 BASIC24.64■■□□□ 1.53
LOC285556D6RIA3 ZNF263-205ENST00000574253 1139 ntTSL 2 BASIC24.64■■□□□ 1.53
Retrieved 100 of 98,524 protein–RNA pairs in 35.7 ms