Protein–RNA interactions for Protein: B4E1H0

SUPT3H, Transcription initiation protein SPT3 homolog, humanhuman

Predictions only

Length 165 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT3HB4E1H0 CCDC185-201ENST00000366875 2054 ntAPPRIS P1 BASIC20.98■□□□□ 0.95
SUPT3HB4E1H0 APLP1-203ENST00000586861 2052 ntTSL 2 BASIC20.98■□□□□ 0.95
SUPT3HB4E1H0 FBXL14-201ENST00000339235 2111 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
SUPT3HB4E1H0 AKR7A2-201ENST00000235835 1362 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
SUPT3HB4E1H0 UPF3A-202ENST00000375299 2387 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
SUPT3HB4E1H0 IRX2-201ENST00000302057 2456 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
SUPT3HB4E1H0 ATP6AP1-201ENST00000369762 2099 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
SUPT3HB4E1H0 AP004607.7-201ENST00000527152 1677 ntBASIC20.97■□□□□ 0.95
SUPT3HB4E1H0 WT1-210ENST00000639563 1494 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
SUPT3HB4E1H0 TERF2-201ENST00000254942 2983 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
SUPT3HB4E1H0 UNC93B3-201ENST00000308076 687 ntBASIC20.97■□□□□ 0.95
SUPT3HB4E1H0 KDELR3-202ENST00000409006 931 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
SUPT3HB4E1H0 AL034346.1-201ENST00000568244 1277 ntBASIC20.97■□□□□ 0.95
SUPT3HB4E1H0 GALNS-211ENST00000568311 703 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
SUPT3HB4E1H0 CCER2-201ENST00000571838 1057 ntAPPRIS P2 TSL 5 BASIC20.97■□□□□ 0.95
SUPT3HB4E1H0 SNX7-201ENST00000306121 1734 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
SUPT3HB4E1H0 ACP1-201ENST00000272065 1549 ntAPPRIS P5 TSL 1 (best) BASIC20.97■□□□□ 0.95
SUPT3HB4E1H0 PSIP1-201ENST00000380715 1966 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
SUPT3HB4E1H0 KLHL17-205ENST00000622660 1950 ntTSL 5 BASIC20.97■□□□□ 0.95
SUPT3HB4E1H0 FAM193B-217ENST00000514747 2913 ntAPPRIS P1 TSL 5 BASIC20.96■□□□□ 0.95
SUPT3HB4E1H0 NARF-202ENST00000345415 1487 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
SUPT3HB4E1H0 HMBS-201ENST00000278715 1501 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
SUPT3HB4E1H0 DNPH1-201ENST00000230431 657 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
SUPT3HB4E1H0 S100A6-201ENST00000368719 665 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
SUPT3HB4E1H0 SRM-201ENST00000376957 1266 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
SUPT3HB4E1H0 HLA-C-203ENST00000383329 1554 ntAPPRIS ALT2 BASIC20.96■□□□□ 0.95
SUPT3HB4E1H0 ACSL1-205ENST00000504900 1583 ntTSL 5 BASIC20.96■□□□□ 0.95
SUPT3HB4E1H0 TPM1-204ENST00000334895 1637 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
SUPT3HB4E1H0 LAMC3-202ENST00000361069 6133 ntAPPRIS P1 TSL 2 BASIC20.96■□□□□ 0.95
SUPT3HB4E1H0 SLC35A3-210ENST00000638371 2298 ntTSL 5 BASIC20.95■□□□□ 0.95
SUPT3HB4E1H0 AMER2-202ENST00000515384 3197 ntAPPRIS P1 BASIC20.95■□□□□ 0.94
SUPT3HB4E1H0 AZIN2-204ENST00000373443 2048 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
SUPT3HB4E1H0 PXK-211ENST00000484288 2031 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
SUPT3HB4E1H0 LRCH4-209ENST00000497245 2014 ntTSL 5 BASIC20.95■□□□□ 0.94
SUPT3HB4E1H0 AC005229.4-201ENST00000610085 2198 ntBASIC20.95■□□□□ 0.94
SUPT3HB4E1H0 AC025164.2-201ENST00000501008 1898 ntTSL 5 BASIC20.95■□□□□ 0.94
SUPT3HB4E1H0 PIAS2-203ENST00000545673 1590 ntTSL 2 BASIC20.95■□□□□ 0.94
SUPT3HB4E1H0 FMR1-204ENST00000370471 4125 ntTSL 5 BASIC20.95■□□□□ 0.94
SUPT3HB4E1H0 AP001107.5-202ENST00000533759 948 ntTSL 5 BASIC20.95■□□□□ 0.94
SUPT3HB4E1H0 CBWD3-212ENST00000616550 721 ntTSL 2 BASIC20.95■□□□□ 0.94
SUPT3HB4E1H0 CBWD6-216ENST00000617933 721 ntTSL 3 BASIC20.95■□□□□ 0.94
SUPT3HB4E1H0 AC018553.2-201ENST00000637770 1064 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
SUPT3HB4E1H0 B4GALNT1-203ENST00000449184 1633 ntTSL 2 BASIC20.95■□□□□ 0.94
SUPT3HB4E1H0 HABP4-201ENST00000375249 2615 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
SUPT3HB4E1H0 TRABD2A-203ENST00000409520 1975 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
SUPT3HB4E1H0 PRSS33-202ENST00000570702 1676 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
SUPT3HB4E1H0 QPCT-201ENST00000338415 1739 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
SUPT3HB4E1H0 SCRN2-212ENST00000584123 1745 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
SUPT3HB4E1H0 CDKN2C-203ENST00000396148 2086 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
SUPT3HB4E1H0 MRPL37-202ENST00000360840 1483 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
SUPT3HB4E1H0 ICAM5-201ENST00000221980 3000 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
SUPT3HB4E1H0 BICRA-204ENST00000614245 5697 ntAPPRIS ALT2 TSL 5 BASIC20.94■□□□□ 0.94
SUPT3HB4E1H0 COL23A1-201ENST00000390654 3061 ntAPPRIS P2 TSL 5 BASIC20.94■□□□□ 0.94
SUPT3HB4E1H0 UBE2J2-201ENST00000347370 2387 ntTSL 3 BASIC20.94■□□□□ 0.94
SUPT3HB4E1H0 ADCK2-201ENST00000072869 2377 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
SUPT3HB4E1H0 ZNF784-201ENST00000325351 2021 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
SUPT3HB4E1H0 WDR86-203ENST00000469830 1691 ntTSL 2 BASIC20.94■□□□□ 0.94
SUPT3HB4E1H0 TRIR-201ENST00000242784 970 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
SUPT3HB4E1H0 PHF7-201ENST00000327906 2130 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
SUPT3HB4E1H0 KRTAP5-1-201ENST00000382171 942 ntAPPRIS P1 BASIC20.94■□□□□ 0.94
SUPT3HB4E1H0 AL136162.1-201ENST00000607711 1078 ntBASIC20.94■□□□□ 0.94
SUPT3HB4E1H0 EFHD1-201ENST00000264059 2259 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
SUPT3HB4E1H0 TMCC2-209ENST00000637895 1455 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
SUPT3HB4E1H0 ST3GAL3-207ENST00000353126 1969 ntTSL 5 BASIC20.94■□□□□ 0.94
SUPT3HB4E1H0 TMEM121-202ENST00000431372 1519 ntAPPRIS P1 TSL 5 BASIC20.94■□□□□ 0.94
SUPT3HB4E1H0 INAFM2-202ENST00000638170 3052 ntAPPRIS P1 BASIC20.93■□□□□ 0.94
SUPT3HB4E1H0 TANGO2-212ENST00000434570 2180 ntTSL 2 BASIC20.93■□□□□ 0.94
SUPT3HB4E1H0 PALM-208ENST00000592155 2272 ntTSL 4 BASIC20.93■□□□□ 0.94
SUPT3HB4E1H0 TPTEP1-205ENST00000558085 1738 ntTSL 2 BASIC20.93■□□□□ 0.94
SUPT3HB4E1H0 ARID1B-220ENST00000636930 8246 ntAPPRIS ALT2 TSL 2 BASIC20.93■□□□□ 0.94
SUPT3HB4E1H0 CCDC130-201ENST00000221554 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
SUPT3HB4E1H0 MEIS3-202ENST00000441740 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
SUPT3HB4E1H0 TCF7L1-201ENST00000282111 2968 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
SUPT3HB4E1H0 BX842568.3-201ENST00000418104 571 ntBASIC20.93■□□□□ 0.94
SUPT3HB4E1H0 NKX2-5-202ENST00000424406 1124 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
SUPT3HB4E1H0 MYL5-208ENST00000511290 781 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
SUPT3HB4E1H0 TOLLIP-208ENST00000527938 549 ntTSL 4 BASIC20.93■□□□□ 0.94
SUPT3HB4E1H0 AC024257.2-201ENST00000549699 147 ntBASIC20.93■□□□□ 0.94
SUPT3HB4E1H0 PLEKHJ1-213ENST00000591099 1092 ntTSL 2 BASIC20.93■□□□□ 0.94
SUPT3HB4E1H0 ZNF664-207ENST00000539644 5108 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
SUPT3HB4E1H0 HERC2P8-204ENST00000567073 1988 ntTSL 5 BASIC20.93■□□□□ 0.94
SUPT3HB4E1H0 RAP1B-204ENST00000393436 2049 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
SUPT3HB4E1H0 FRMD3-204ENST00000376438 2198 ntTSL 2 BASIC20.93■□□□□ 0.94
SUPT3HB4E1H0 TMEM98-206ENST00000579849 4434 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
SUPT3HB4E1H0 HAUS4-201ENST00000206474 1642 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
SUPT3HB4E1H0 ZNF517-207ENST00000531720 1615 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
SUPT3HB4E1H0 OAF-201ENST00000328965 2525 ntAPPRIS P2 TSL 1 (best) BASIC20.93■□□□□ 0.94
SUPT3HB4E1H0 LMAN2-201ENST00000303127 1800 ntAPPRIS P2 TSL 1 (best) BASIC20.92■□□□□ 0.94
SUPT3HB4E1H0 PHPT1-201ENST00000247665 890 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
SUPT3HB4E1H0 NAA38-201ENST00000333775 999 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
SUPT3HB4E1H0 LYPD2-201ENST00000359228 594 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
SUPT3HB4E1H0 IGHV3-20-201ENST00000390606 415 ntAPPRIS P1 BASIC20.92■□□□□ 0.94
SUPT3HB4E1H0 RNF208-201ENST00000391553 1077 ntAPPRIS P1 BASIC20.92■□□□□ 0.94
SUPT3HB4E1H0 PRMT2-204ENST00000397628 954 ntTSL 2 BASIC20.92■□□□□ 0.94
SUPT3HB4E1H0 CKLF-205ENST00000417030 628 ntAPPRIS ALT2 TSL 4 BASIC20.92■□□□□ 0.94
SUPT3HB4E1H0 AC061979.1-201ENST00000532061 434 ntTSL 5 BASIC20.92■□□□□ 0.94
SUPT3HB4E1H0 ZNF584-205ENST00000596281 575 ntTSL 2 BASIC20.92■□□□□ 0.94
SUPT3HB4E1H0 GFRA3-202ENST00000378362 1837 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
SUPT3HB4E1H0 MXRA8-201ENST00000309212 2273 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
SUPT3HB4E1H0 PTPN18-202ENST00000347849 2472 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 29.2 ms