Protein–RNA interactions for Protein: A6NM66

LINC01548, Uncharacterized protein encoded by LINC01548, humanhuman

Predictions only

Length 108 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01548A6NM66 GPSM1-201ENST00000291775 2114 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
LINC01548A6NM66 MYB-221ENST00000527615 2381 ntTSL 5 BASIC16.88■□□□□ 0.29
LINC01548A6NM66 POU4F1-201ENST00000377208 4547 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
LINC01548A6NM66 C1orf174-201ENST00000361605 1666 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
LINC01548A6NM66 ZMYND11-210ENST00000403354 1664 ntTSL 5 BASIC16.88■□□□□ 0.29
LINC01548A6NM66 CCNG2-204ENST00000502280 1459 ntAPPRIS P1 TSL 2 BASIC16.88■□□□□ 0.29
LINC01548A6NM66 FAM99A-202ENST00000538190 1989 ntBASIC16.88■□□□□ 0.29
LINC01548A6NM66 ASRGL1-202ENST00000415229 2270 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
LINC01548A6NM66 NABP2-203ENST00000380198 1775 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
LINC01548A6NM66 JSRP1-201ENST00000300961 1138 ntAPPRIS P1 TSL 2 BASIC16.88■□□□□ 0.29
LINC01548A6NM66 GP9-201ENST00000307395 889 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
LINC01548A6NM66 C5orf38-201ENST00000334000 890 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
LINC01548A6NM66 DCTN3-202ENST00000341694 899 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
LINC01548A6NM66 DCTN3-205ENST00000378916 773 ntTSL 2 BASIC16.88■□□□□ 0.29
LINC01548A6NM66 GLI4-210ENST00000523522 1297 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
LINC01548A6NM66 AC004528.2-201ENST00000610701 440 ntTSL 5 BASIC16.88■□□□□ 0.29
LINC01548A6NM66 CPT2-209ENST00000636935 803 ntTSL 5 BASIC16.88■□□□□ 0.29
LINC01548A6NM66 FAM19A5-202ENST00000358295 2638 ntAPPRIS P1 TSL 2 BASIC16.88■□□□□ 0.29
LINC01548A6NM66 LIMS2-202ENST00000355119 2045 ntAPPRIS ALT1 TSL 1 (best) BASIC16.87■□□□□ 0.29
LINC01548A6NM66 NPAS1-202ENST00000449844 2043 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
LINC01548A6NM66 IRX4-207ENST00000613726 2403 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
LINC01548A6NM66 AKT1S1-206ENST00000391834 1849 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
LINC01548A6NM66 HIST2H2AC-201ENST00000331380 390 ntAPPRIS P1 BASIC16.87■□□□□ 0.29
LINC01548A6NM66 COX20-201ENST00000366528 568 ntTSL 2 BASIC16.87■□□□□ 0.29
LINC01548A6NM66 KRTAP5-2-201ENST00000412090 1118 ntAPPRIS P1 BASIC16.87■□□□□ 0.29
LINC01548A6NM66 PGAP3-204ENST00000429199 970 ntTSL 2 BASIC16.87■□□□□ 0.29
LINC01548A6NM66 AC079140.4-201ENST00000507448 529 ntBASIC16.87■□□□□ 0.29
LINC01548A6NM66 C12orf43-208ENST00000539736 1033 ntAPPRIS ALT2 TSL 2 BASIC16.87■□□□□ 0.29
LINC01548A6NM66 AL390816.2-201ENST00000554252 737 ntTSL 3 BASIC16.87■□□□□ 0.29
LINC01548A6NM66 H2AFB3-201ENST00000615853 591 ntAPPRIS P1 BASIC16.87■□□□□ 0.29
LINC01548A6NM66 TMEM182-210ENST00000639249 1025 ntTSL 5 BASIC16.87■□□□□ 0.29
LINC01548A6NM66 DNAJC25-201ENST00000313525 2268 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
LINC01548A6NM66 TSPAN3-202ENST00000346495 1647 ntTSL 2 BASIC16.87■□□□□ 0.29
LINC01548A6NM66 TTC9-201ENST00000256367 5217 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
LINC01548A6NM66 SPATA22-214ENST00000575375 1374 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
LINC01548A6NM66 SLC4A3-203ENST00000358055 4454 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
LINC01548A6NM66 SPAST-204ENST00000621856 1715 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
LINC01548A6NM66 CITED2-202ENST00000536159 1797 ntAPPRIS P1 TSL 3 BASIC16.87■□□□□ 0.29
LINC01548A6NM66 CITED2-203ENST00000537332 1780 ntTSL 3 BASIC16.87■□□□□ 0.29
LINC01548A6NM66 AC004854.2-201ENST00000608450 1441 ntBASIC16.87■□□□□ 0.29
LINC01548A6NM66 DAZAP1-211ENST00000592522 2157 ntAPPRIS ALT1 TSL 5 BASIC16.87■□□□□ 0.29
LINC01548A6NM66 AP004607.4-201ENST00000530158 1459 ntBASIC16.86■□□□□ 0.29
LINC01548A6NM66 ME2-206ENST00000638410 2289 ntTSL 5 BASIC16.86■□□□□ 0.29
LINC01548A6NM66 ME2-210ENST00000639255 2262 ntTSL 5 BASIC16.86■□□□□ 0.29
LINC01548A6NM66 NKX6-2-201ENST00000368592 2673 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
LINC01548A6NM66 MEIS3-212ENST00000561293 1918 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
LINC01548A6NM66 LOXL1-201ENST00000261921 2351 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
LINC01548A6NM66 CACYBP-201ENST00000367679 2766 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
LINC01548A6NM66 PROSER2-205ENST00000622831 1646 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
LINC01548A6NM66 RAB28-208ENST00000630951 1679 ntTSL 5 BASIC16.86■□□□□ 0.29
LINC01548A6NM66 ACYP2-201ENST00000303536 789 ntTSL 2 BASIC16.86■□□□□ 0.29
LINC01548A6NM66 HBM-201ENST00000356815 506 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
LINC01548A6NM66 RORB-AS1-201ENST00000417576 1178 ntTSL 5 BASIC16.86■□□□□ 0.29
LINC01548A6NM66 AC108002.2-201ENST00000519782 340 ntTSL 4 BASIC16.86■□□□□ 0.29
LINC01548A6NM66 RPLP2-207ENST00000530797 637 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
LINC01548A6NM66 ANTXR2-202ENST00000346652 1343 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
LINC01548A6NM66 TMEM165-201ENST00000381334 1928 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
LINC01548A6NM66 SSX2IP-203ENST00000437941 5843 ntTSL 2 BASIC16.85■□□□□ 0.29
LINC01548A6NM66 CDC14B-202ENST00000375241 5589 ntAPPRIS P2 TSL 1 (best) BASIC16.85■□□□□ 0.29
LINC01548A6NM66 PGF-201ENST00000238607 1693 ntAPPRIS ALT2 TSL 3 BASIC16.85■□□□□ 0.29
LINC01548A6NM66 NDUFB2-212ENST00000476279 1666 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
LINC01548A6NM66 CHST7-201ENST00000276055 2289 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
LINC01548A6NM66 SPATA2L-201ENST00000289805 2335 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
LINC01548A6NM66 NELFCD-213ENST00000602795 2305 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
LINC01548A6NM66 GMDS-202ENST00000380815 1752 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
LINC01548A6NM66 UBTF-213ENST00000533177 3011 ntTSL 5 BASIC16.85■□□□□ 0.29
LINC01548A6NM66 BICDL2-201ENST00000389347 1811 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
LINC01548A6NM66 GZMM-201ENST00000264553 940 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
LINC01548A6NM66 ATE1-AS1-201ENST00000437593 951 ntTSL 2 BASIC16.85■□□□□ 0.29
LINC01548A6NM66 AC012414.4-201ENST00000560839 1074 ntTSL 5 BASIC16.85■□□□□ 0.29
LINC01548A6NM66 MCRIP1-204ENST00000570507 765 ntTSL 2 BASIC16.85■□□□□ 0.29
LINC01548A6NM66 MCRIP1-208ENST00000575061 618 ntTSL 5 BASIC16.85■□□□□ 0.29
LINC01548A6NM66 AP001005.4-202ENST00000575325 560 ntTSL 4 BASIC16.85■□□□□ 0.29
LINC01548A6NM66 AL512625.3-202ENST00000591993 1091 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
LINC01548A6NM66 AC060814.5-201ENST00000630916 1074 ntTSL 2 BASIC16.85■□□□□ 0.29
LINC01548A6NM66 SPN-202ENST00000395389 1935 ntAPPRIS P2 TSL 1 (best) BASIC16.85■□□□□ 0.29
LINC01548A6NM66 AC010542.4-201ENST00000563151 1910 ntBASIC16.85■□□□□ 0.29
LINC01548A6NM66 GCH1-202ENST00000395514 1977 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
LINC01548A6NM66 SOAT2-201ENST00000301466 2044 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
LINC01548A6NM66 SEPT5-210ENST00000455784 2070 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
LINC01548A6NM66 SYNGR2-203ENST00000588282 1553 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
LINC01548A6NM66 RPL13-202ENST00000393099 2385 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
LINC01548A6NM66 TM9SF3-201ENST00000371142 6141 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
LINC01548A6NM66 MEIS3-202ENST00000441740 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
LINC01548A6NM66 RBBP7-202ENST00000380084 2036 ntTSL 2 BASIC16.84■□□□□ 0.29
LINC01548A6NM66 PLPP5-203ENST00000424479 2130 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
LINC01548A6NM66 TDRKH-206ENST00000440583 2296 ntTSL 5 BASIC16.84■□□□□ 0.29
LINC01548A6NM66 TSPAN2-201ENST00000369515 793 ntTSL 3 BASIC16.84■□□□□ 0.29
LINC01548A6NM66 BCKDHB-203ENST00000369760 743 ntTSL 3 BASIC16.84■□□□□ 0.29
LINC01548A6NM66 FDX2-202ENST00000393708 1012 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
LINC01548A6NM66 AC104986.2-201ENST00000521696 380 ntTSL 2 BASIC16.84■□□□□ 0.29
LINC01548A6NM66 CYB561D2-205ENST00000425346 1319 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
LINC01548A6NM66 GRM6-202ENST00000517717 2673 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
LINC01548A6NM66 UCK2-201ENST00000367879 1375 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
LINC01548A6NM66 CERKL-204ENST00000374970 1392 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
LINC01548A6NM66 SPI1-202ENST00000378538 1403 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
LINC01548A6NM66 ECHDC2-221ENST00000536120 1446 ntTSL 3 BASIC16.84■□□□□ 0.29
LINC01548A6NM66 ACSL1-205ENST00000504900 1583 ntTSL 5 BASIC16.84■□□□□ 0.29
LINC01548A6NM66 AMER2-202ENST00000515384 3197 ntAPPRIS P1 BASIC16.84■□□□□ 0.29
LINC01548A6NM66 DHRS2-202ENST00000344777 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 30 ms