Protein–RNA interactions for Protein: A6NLX3

SPDYE4, Speedy protein E4, humanhuman

Predictions only

Length 237 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPDYE4A6NLX3 RTCA-202ENST00000370126 538 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
SPDYE4A6NLX3 ASPDH-202ENST00000389208 1040 ntAPPRIS P1 TSL 5 BASIC23.8■■□□□ 1.4
SPDYE4A6NLX3 SLC25A45-206ENST00000526432 894 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
SPDYE4A6NLX3 DACT1-204ENST00000541264 2610 ntAPPRIS ALT2 TSL 2 BASIC23.8■■□□□ 1.4
SPDYE4A6NLX3 AP001005.4-202ENST00000575325 560 ntTSL 4 BASIC23.8■■□□□ 1.4
SPDYE4A6NLX3 CD7-207ENST00000584284 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC23.8■■□□□ 1.4
SPDYE4A6NLX3 SLC35A2-212ENST00000634665 486 ntTSL 4 BASIC23.8■■□□□ 1.4
SPDYE4A6NLX3 CRTC1-203ENST00000594658 2384 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
SPDYE4A6NLX3 AL117348.2-201ENST00000432920 1625 ntAPPRIS P1 TSL 2 BASIC23.8■■□□□ 1.4
SPDYE4A6NLX3 AC007952.6-201ENST00000573168 2673 ntBASIC23.79■■□□□ 1.4
SPDYE4A6NLX3 AC003957.1-201ENST00000625108 2673 ntBASIC23.79■■□□□ 1.4
SPDYE4A6NLX3 FGFR1-214ENST00000447712 5900 ntAPPRIS P3 TSL 1 (best) BASIC23.79■■□□□ 1.4
SPDYE4A6NLX3 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC23.79■■□□□ 1.4
SPDYE4A6NLX3 INSM2-201ENST00000307169 3013 ntAPPRIS P1 BASIC23.79■■□□□ 1.4
SPDYE4A6NLX3 NXN-201ENST00000336868 3036 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
SPDYE4A6NLX3 TIGD5-201ENST00000504548 5390 ntAPPRIS P1 BASIC23.79■■□□□ 1.4
SPDYE4A6NLX3 PHF10-202ENST00000366780 1589 ntAPPRIS ALT2 TSL 5 BASIC23.79■■□□□ 1.4
SPDYE4A6NLX3 PARD3-214ENST00000545693 5962 ntAPPRIS ALT2 TSL 1 (best) BASIC23.79■■□□□ 1.4
SPDYE4A6NLX3 EIF6-203ENST00000374450 1289 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
SPDYE4A6NLX3 SLC47A1P1-202ENST00000449666 945 ntBASIC23.79■■□□□ 1.4
SPDYE4A6NLX3 AC005775.1-201ENST00000592413 850 ntTSL 5 BASIC23.79■■□□□ 1.4
SPDYE4A6NLX3 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC23.79■■□□□ 1.4
SPDYE4A6NLX3 TRIM58-201ENST00000366481 3225 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
SPDYE4A6NLX3 ALDH1A3-203ENST00000557963 1670 ntBASIC23.79■■□□□ 1.4
SPDYE4A6NLX3 LENG1-201ENST00000222224 1542 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
SPDYE4A6NLX3 PBX4-201ENST00000251203 1724 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
SPDYE4A6NLX3 STRADB-201ENST00000194530 2293 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
SPDYE4A6NLX3 PRMT5-201ENST00000216350 2271 ntTSL 2 BASIC23.79■■□□□ 1.4
SPDYE4A6NLX3 AFDN-202ENST00000351017 5823 ntTSL 5 BASIC23.78■■□□□ 1.4
SPDYE4A6NLX3 TOR1B-201ENST00000259339 2769 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
SPDYE4A6NLX3 TSPAN2-201ENST00000369515 793 ntTSL 3 BASIC23.78■■□□□ 1.4
SPDYE4A6NLX3 GDNF-203ENST00000381826 778 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
SPDYE4A6NLX3 IGHV3-20-201ENST00000390606 415 ntAPPRIS P1 BASIC23.78■■□□□ 1.4
SPDYE4A6NLX3 BHLHA9-201ENST00000391429 902 ntAPPRIS P1 BASIC23.78■■□□□ 1.4
SPDYE4A6NLX3 GDNF-204ENST00000427982 856 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
SPDYE4A6NLX3 AC090192.1-201ENST00000517740 490 ntBASIC23.78■■□□□ 1.4
SPDYE4A6NLX3 SSPN-204ENST00000535504 419 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
SPDYE4A6NLX3 UBE2Q2P2-204ENST00000618775 648 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
SPDYE4A6NLX3 GSPT1-203ENST00000439887 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC23.78■■□□□ 1.4
SPDYE4A6NLX3 CYP2A7-201ENST00000291764 2128 ntTSL 5 BASIC23.78■■□□□ 1.4
SPDYE4A6NLX3 TXNRD2-203ENST00000400519 3155 ntAPPRIS ALT2 TSL 1 (best) BASIC23.78■■□□□ 1.4
SPDYE4A6NLX3 FAM110D-201ENST00000374268 2858 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
SPDYE4A6NLX3 CXXC5-201ENST00000302517 2658 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
SPDYE4A6NLX3 HSPBP1-206ENST00000587922 1449 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
SPDYE4A6NLX3 PLPP5-203ENST00000424479 2130 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
SPDYE4A6NLX3 KLF14-201ENST00000583337 2827 ntAPPRIS P1 BASIC23.77■■□□□ 1.4
SPDYE4A6NLX3 PRMT8-202ENST00000382622 2366 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
SPDYE4A6NLX3 TMEM25-205ENST00000411589 2442 ntAPPRIS ALT2 TSL 2 BASIC23.77■■□□□ 1.4
SPDYE4A6NLX3 MRPL14-201ENST00000372014 959 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
SPDYE4A6NLX3 AP001107.5-202ENST00000533759 948 ntTSL 5 BASIC23.77■■□□□ 1.4
SPDYE4A6NLX3 LRRC37A17P-202ENST00000570478 572 ntTSL 4 BASIC23.77■■□□□ 1.4
SPDYE4A6NLX3 AL138963.3-201ENST00000610057 588 ntTSL 4 BASIC23.77■■□□□ 1.4
SPDYE4A6NLX3 IKBKGP1-201ENST00000612193 1073 ntBASIC23.77■■□□□ 1.4
SPDYE4A6NLX3 PHACTR2-203ENST00000367584 2490 ntAPPRIS ALT2 TSL 5 BASIC23.77■■□□□ 1.4
SPDYE4A6NLX3 ZNHIT2-201ENST00000310597 1306 ntAPPRIS P1 BASIC23.77■■□□□ 1.4
SPDYE4A6NLX3 C11orf96-201ENST00000339446 1308 ntTSL 5 BASIC23.77■■□□□ 1.4
SPDYE4A6NLX3 IER2-201ENST00000292433 2085 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
SPDYE4A6NLX3 SYNGR2-201ENST00000225777 2325 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
SPDYE4A6NLX3 ARMC9-201ENST00000349938 2300 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
SPDYE4A6NLX3 AF106564.1-201ENST00000607058 2553 ntBASIC23.77■■□□□ 1.4
SPDYE4A6NLX3 FMR1-204ENST00000370471 4125 ntTSL 5 BASIC23.77■■□□□ 1.4
SPDYE4A6NLX3 RCN2-202ENST00000394883 1366 ntTSL 5 BASIC23.77■■□□□ 1.4
SPDYE4A6NLX3 HEY2-201ENST00000368364 2678 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.39
SPDYE4A6NLX3 FBRS-202ENST00000356166 5200 ntTSL 5 BASIC23.77■■□□□ 1.39
SPDYE4A6NLX3 ATOH8-201ENST00000306279 2438 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
SPDYE4A6NLX3 C14orf80-201ENST00000329886 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC23.76■■□□□ 1.39
SPDYE4A6NLX3 AC092068.2-201ENST00000590491 1708 ntBASIC23.76■■□□□ 1.39
SPDYE4A6NLX3 PNRC1-201ENST00000336032 2065 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
SPDYE4A6NLX3 CNTFR-202ENST00000378980 2052 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
SPDYE4A6NLX3 HACD1-201ENST00000326961 773 ntTSL 2 BASIC23.76■■□□□ 1.39
SPDYE4A6NLX3 LINC01167-201ENST00000423232 604 ntTSL 3 BASIC23.76■■□□□ 1.39
SPDYE4A6NLX3 TMEM70-203ENST00000517439 617 ntTSL 2 BASIC23.76■■□□□ 1.39
SPDYE4A6NLX3 AC022517.1-201ENST00000592429 346 ntBASIC23.76■■□□□ 1.39
SPDYE4A6NLX3 RBFOX1-206ENST00000535565 1599 ntTSL 2 BASIC23.76■■□□□ 1.39
SPDYE4A6NLX3 INSM1-201ENST00000310227 2829 ntAPPRIS P1 BASIC23.76■■□□□ 1.39
SPDYE4A6NLX3 BRSK2-208ENST00000528841 3586 ntAPPRIS ALT2 TSL 1 (best) BASIC23.76■■□□□ 1.39
SPDYE4A6NLX3 FADS6-204ENST00000614223 2044 ntAPPRIS ALT2 TSL 5 BASIC23.76■■□□□ 1.39
SPDYE4A6NLX3 USP36-218ENST00000590546 1771 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
SPDYE4A6NLX3 SYT7-201ENST00000263846 4854 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
SPDYE4A6NLX3 NIPA2-202ENST00000359727 1531 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
SPDYE4A6NLX3 SPG21-202ENST00000416889 1533 ntTSL 2 BASIC23.75■■□□□ 1.39
SPDYE4A6NLX3 FBXW7-202ENST00000281708 4976 ntAPPRIS P4 TSL 1 (best) BASIC23.75■■□□□ 1.39
SPDYE4A6NLX3 PTX3-201ENST00000295927 1940 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
SPDYE4A6NLX3 P4HTM-201ENST00000343546 2268 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
SPDYE4A6NLX3 FLOT1-201ENST00000376389 1912 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
SPDYE4A6NLX3 MTMR9LP-204ENST00000441044 2624 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
SPDYE4A6NLX3 MAP7-206ENST00000611373 2317 ntAPPRIS ALT2 TSL 5 BASIC23.75■■□□□ 1.39
SPDYE4A6NLX3 PRR25-201ENST00000301698 1209 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
SPDYE4A6NLX3 UBE2C-202ENST00000335046 737 ntTSL 2 BASIC23.75■■□□□ 1.39
SPDYE4A6NLX3 AC012313.1-204ENST00000444227 462 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
SPDYE4A6NLX3 AL358852.1-201ENST00000623174 1268 ntBASIC23.75■■□□□ 1.39
SPDYE4A6NLX3 IMPA2-212ENST00000625802 500 ntTSL 2 BASIC23.75■■□□□ 1.39
SPDYE4A6NLX3 RARRES2P11-201ENST00000635158 484 ntBASIC23.75■■□□□ 1.39
SPDYE4A6NLX3 C1orf198-201ENST00000366663 3858 ntAPPRIS P3 TSL 1 (best) BASIC23.75■■□□□ 1.39
SPDYE4A6NLX3 SYNGR3-202ENST00000562045 1743 ntTSL 2 BASIC23.75■■□□□ 1.39
SPDYE4A6NLX3 NCKAP1-201ENST00000360982 4989 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
SPDYE4A6NLX3 JUNB-201ENST00000302754 1820 ntAPPRIS P1 BASIC23.75■■□□□ 1.39
SPDYE4A6NLX3 TLX1-203ENST00000467928 1838 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
SPDYE4A6NLX3 NUDT16L1-204ENST00000586536 1406 ntTSL 2 BASIC23.75■■□□□ 1.39
SPDYE4A6NLX3 NR2F1-AS1-210ENST00000606739 1431 ntTSL 2 BASIC23.75■■□□□ 1.39
Retrieved 100 of 98,524 protein–RNA pairs in 27.4 ms