Protein–RNA interactions for Protein: A6NFA1

TRABD2B, Metalloprotease TIKI2, humanhuman

Predictions only

Length 517 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRABD2BA6NFA1 STRBP-202ENST00000360998 2990 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
TRABD2BA6NFA1 DENND5A-201ENST00000328194 5031 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
TRABD2BA6NFA1 LIPT2-201ENST00000310109 1018 ntAPPRIS P1 TSL 2 BASIC20.53■□□□□ 0.88
TRABD2BA6NFA1 TTC9B-201ENST00000311308 843 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
TRABD2BA6NFA1 ESRRAP1-201ENST00000400596 1257 ntBASIC20.53■□□□□ 0.88
TRABD2BA6NFA1 NDUFB2-203ENST00000461457 559 ntTSL 3 BASIC20.53■□□□□ 0.88
TRABD2BA6NFA1 ZNF148-203ENST00000468369 1025 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
TRABD2BA6NFA1 RPS2P4-201ENST00000476944 856 ntBASIC20.53■□□□□ 0.88
TRABD2BA6NFA1 KRT18P20-201ENST00000548986 1279 ntBASIC20.53■□□□□ 0.88
TRABD2BA6NFA1 LIMD2-206ENST00000578993 602 ntTSL 3 BASIC20.53■□□□□ 0.88
TRABD2BA6NFA1 PET100-202ENST00000594797 719 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
TRABD2BA6NFA1 FAM71E1-204ENST00000600100 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
TRABD2BA6NFA1 SLC2A11-202ENST00000316185 1555 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
TRABD2BA6NFA1 PXK-203ENST00000383715 1756 ntTSL 5 BASIC20.53■□□□□ 0.88
TRABD2BA6NFA1 SCRT2-201ENST00000246104 3577 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
TRABD2BA6NFA1 RBPMS2-201ENST00000300069 2008 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
TRABD2BA6NFA1 PPP2R2D-201ENST00000455566 5738 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
TRABD2BA6NFA1 IRF3-201ENST00000309877 1691 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
TRABD2BA6NFA1 GRTP1-203ENST00000375431 1384 ntAPPRIS P3 TSL 1 (best) BASIC20.52■□□□□ 0.88
TRABD2BA6NFA1 CASP9-203ENST00000375890 1351 ntTSL 2 BASIC20.52■□□□□ 0.88
TRABD2BA6NFA1 SEC61A2-206ENST00000379051 707 ntTSL 3 BASIC20.52■□□□□ 0.88
TRABD2BA6NFA1 AC007040.1-201ENST00000416229 477 ntTSL 3 BASIC20.52■□□□□ 0.88
TRABD2BA6NFA1 COL19A1-203ENST00000478620 589 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
TRABD2BA6NFA1 CASP6-205ENST00000505486 538 ntTSL 4 BASIC20.52■□□□□ 0.88
TRABD2BA6NFA1 ADM-205ENST00000528544 586 ntTSL 2 BASIC20.52■□□□□ 0.88
TRABD2BA6NFA1 AL772284.2-201ENST00000620151 1147 ntAPPRIS P1 TSL 5 BASIC20.52■□□□□ 0.88
TRABD2BA6NFA1 AC013268.1-206ENST00000638368 961 ntBASIC20.52■□□□□ 0.88
TRABD2BA6NFA1 AC112229.1-201ENST00000639295 961 ntBASIC20.52■□□□□ 0.88
TRABD2BA6NFA1 HOXA10-206ENST00000613671 2175 ntTSL 5 BASIC20.52■□□□□ 0.88
TRABD2BA6NFA1 CTSF-201ENST00000310325 2035 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
TRABD2BA6NFA1 SNX24-211ENST00000513881 1563 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
TRABD2BA6NFA1 AMZ2P1-201ENST00000397713 2259 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
TRABD2BA6NFA1 AC079630.1-202ENST00000618127 1840 ntBASIC20.51■□□□□ 0.87
TRABD2BA6NFA1 DACT3-201ENST00000300875 2526 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
TRABD2BA6NFA1 BASP1-203ENST00000616743 1711 ntAPPRIS P1 TSL 3 BASIC20.51■□□□□ 0.87
TRABD2BA6NFA1 MRGBP-201ENST00000370487 2781 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
TRABD2BA6NFA1 BAALC-201ENST00000297574 801 ntTSL 3 BASIC20.51■□□□□ 0.87
TRABD2BA6NFA1 PPP1CA-202ENST00000358239 1054 ntTSL 2 BASIC20.51■□□□□ 0.87
TRABD2BA6NFA1 HOXD12-201ENST00000404162 841 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
TRABD2BA6NFA1 BET1L-204ENST00000410108 637 ntTSL 3 BASIC20.51■□□□□ 0.87
TRABD2BA6NFA1 AL391244.2-201ENST00000428932 543 ntTSL 2 BASIC20.51■□□□□ 0.87
TRABD2BA6NFA1 AC142381.4-202ENST00000563973 229 ntBASIC20.51■□□□□ 0.87
TRABD2BA6NFA1 AC003102.1-201ENST00000588279 569 ntTSL 4 BASIC20.51■□□□□ 0.87
TRABD2BA6NFA1 NKX2-3-202ENST00000622383 1986 ntTSL 5 BASIC20.51■□□□□ 0.87
TRABD2BA6NFA1 LSR-201ENST00000347609 1880 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
TRABD2BA6NFA1 LSR-213ENST00000605618 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
TRABD2BA6NFA1 TBL1X-201ENST00000217964 5871 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
TRABD2BA6NFA1 AC068338.2-201ENST00000563278 1430 ntBASIC20.51■□□□□ 0.87
TRABD2BA6NFA1 PDLIM3-203ENST00000284771 1672 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
TRABD2BA6NFA1 NAGLU-201ENST00000225927 2544 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
TRABD2BA6NFA1 PELI3-201ENST00000320740 2740 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
TRABD2BA6NFA1 GNAS-201ENST00000265620 1866 ntAPPRIS P3 TSL 1 (best) BASIC20.5■□□□□ 0.87
TRABD2BA6NFA1 TBC1D22A-202ENST00000355704 1886 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
TRABD2BA6NFA1 ASCC1-204ENST00000394915 1510 ntTSL 5 BASIC20.5■□□□□ 0.87
TRABD2BA6NFA1 MTHFS-201ENST00000258874 907 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
TRABD2BA6NFA1 EFCAB6-202ENST00000356087 1129 ntTSL 5 BASIC20.5■□□□□ 0.87
TRABD2BA6NFA1 SLC35A2-202ENST00000376512 903 ntTSL 2 BASIC20.5■□□□□ 0.87
TRABD2BA6NFA1 AKAIN1-201ENST00000434239 575 ntAPPRIS P1 TSL 2 BASIC20.5■□□□□ 0.87
TRABD2BA6NFA1 TERF1P5-201ENST00000477545 1207 ntBASIC20.5■□□□□ 0.87
TRABD2BA6NFA1 HTATIP2-208ENST00000532505 595 ntTSL 2 BASIC20.5■□□□□ 0.87
TRABD2BA6NFA1 LINC01578-208ENST00000557147 490 ntTSL 3 BASIC20.5■□□□□ 0.87
TRABD2BA6NFA1 AC100835.1-201ENST00000565737 498 ntTSL 5 BASIC20.5■□□□□ 0.87
TRABD2BA6NFA1 AC092118.2-201ENST00000613495 667 ntBASIC20.5■□□□□ 0.87
TRABD2BA6NFA1 SLC39A4-202ENST00000301305 2174 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
TRABD2BA6NFA1 PDIA2-201ENST00000219406 1698 ntAPPRIS P2 TSL 1 (best) BASIC20.5■□□□□ 0.87
TRABD2BA6NFA1 PON2-202ENST00000433091 1726 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
TRABD2BA6NFA1 AQP12B-201ENST00000407834 1094 ntAPPRIS P2 TSL 1 (best) BASIC20.49■□□□□ 0.87
TRABD2BA6NFA1 LINC01816-201ENST00000414141 662 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
TRABD2BA6NFA1 INTS11-205ENST00000429572 1104 ntTSL 2 BASIC20.49■□□□□ 0.87
TRABD2BA6NFA1 CYP2T1P-201ENST00000432607 1285 ntBASIC20.49■□□□□ 0.87
TRABD2BA6NFA1 AC010141.2-201ENST00000452426 721 ntBASIC20.49■□□□□ 0.87
TRABD2BA6NFA1 C14orf28-204ENST00000557112 1097 ntTSL 5 BASIC20.49■□□□□ 0.87
TRABD2BA6NFA1 CIRBP-246ENST00000628979 1043 ntTSL 2 BASIC20.49■□□□□ 0.87
TRABD2BA6NFA1 PLAGL1-207ENST00000417959 1645 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
TRABD2BA6NFA1 SNX18-201ENST00000326277 2063 ntTSL 2 BASIC20.49■□□□□ 0.87
TRABD2BA6NFA1 ADAP2-204ENST00000580525 1598 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
TRABD2BA6NFA1 CLDN5-201ENST00000403084 2357 ntBASIC20.48■□□□□ 0.87
TRABD2BA6NFA1 ZNF707-222ENST00000532158 2218 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
TRABD2BA6NFA1 RARRES2-201ENST00000223271 740 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
TRABD2BA6NFA1 CALML5-201ENST00000380332 859 ntAPPRIS P1 BASIC20.48■□□□□ 0.87
TRABD2BA6NFA1 TRA2B-203ENST00000382191 976 ntTSL 2 BASIC20.48■□□□□ 0.87
TRABD2BA6NFA1 ASMTL-AS1-203ENST00000425740 840 ntTSL 2 BASIC20.48■□□□□ 0.87
TRABD2BA6NFA1 LTB-210ENST00000429299 897 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
TRABD2BA6NFA1 AP000785.1-201ENST00000527314 613 ntTSL 4 BASIC20.48■□□□□ 0.87
TRABD2BA6NFA1 AC011611.3-201ENST00000552367 569 ntTSL 4 BASIC20.48■□□□□ 0.87
TRABD2BA6NFA1 CLN6-207ENST00000566347 981 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
TRABD2BA6NFA1 AC110285.4-201ENST00000572590 424 ntTSL 3 BASIC20.48■□□□□ 0.87
TRABD2BA6NFA1 CIRBP-211ENST00000586773 942 ntAPPRIS ALT1 TSL 2 BASIC20.48■□□□□ 0.87
TRABD2BA6NFA1 OR10C1-204ENST00000622521 1039 ntBASIC20.48■□□□□ 0.87
TRABD2BA6NFA1 KISS1R-201ENST00000234371 1625 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
TRABD2BA6NFA1 TMEM230-205ENST00000379279 1636 ntAPPRIS P1 TSL 2 BASIC20.48■□□□□ 0.87
TRABD2BA6NFA1 GPR137-201ENST00000313074 1485 ntTSL 5 BASIC20.48■□□□□ 0.87
TRABD2BA6NFA1 GPR137-203ENST00000411458 1495 ntTSL 2 BASIC20.48■□□□□ 0.87
TRABD2BA6NFA1 NAPRT-204ENST00000449291 1965 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
TRABD2BA6NFA1 PRR7-202ENST00000502922 1345 ntAPPRIS P1 TSL 2 BASIC20.48■□□□□ 0.87
TRABD2BA6NFA1 DUSP8P5-201ENST00000422884 1815 ntBASIC20.48■□□□□ 0.87
TRABD2BA6NFA1 ABCB10P4-201ENST00000566803 2184 ntBASIC20.48■□□□□ 0.87
TRABD2BA6NFA1 RUNDC3A-202ENST00000426726 2048 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
TRABD2BA6NFA1 IRX5-201ENST00000320990 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC20.47■□□□□ 0.87
TRABD2BA6NFA1 FBXW4-201ENST00000331272 2483 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 46.4 ms