Protein–RNA interactions for Protein: A0AVI4

TMEM129, E3 ubiquitin-protein ligase TM129, humanhuman

Predictions only

Length 362 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM129A0AVI4 PPP1R12B-212ENST00000480184 1808 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
TMEM129A0AVI4 STARD3-202ENST00000394250 1949 ntTSL 2 BASIC19.26■□□□□ 0.67
TMEM129A0AVI4 SERBP1P1-201ENST00000396021 1160 ntBASIC19.26■□□□□ 0.67
TMEM129A0AVI4 WDR86-AS1-204ENST00000489632 751 ntTSL 3 BASIC19.26■□□□□ 0.67
TMEM129A0AVI4 CDKN2A-206ENST00000494262 989 ntTSL 3 BASIC19.26■□□□□ 0.67
TMEM129A0AVI4 AL359317.1-201ENST00000556316 578 ntTSL 4 BASIC19.26■□□□□ 0.67
TMEM129A0AVI4 TGFBR3L-202ENST00000565886 1260 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
TMEM129A0AVI4 AL031432.3-201ENST00000607698 485 ntBASIC19.26■□□□□ 0.67
TMEM129A0AVI4 AC241377.3-202ENST00000626088 1088 ntBASIC19.26■□□□□ 0.67
TMEM129A0AVI4 AC241585.3-202ENST00000628937 1088 ntBASIC19.26■□□□□ 0.67
TMEM129A0AVI4 AC245100.8-202ENST00000629247 1058 ntBASIC19.26■□□□□ 0.67
TMEM129A0AVI4 PSIP1-201ENST00000380715 1966 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
TMEM129A0AVI4 BID-215ENST00000622694 2199 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
TMEM129A0AVI4 DLEU2-208ENST00000621282 3068 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
TMEM129A0AVI4 PLEKHJ1-206ENST00000587962 1311 ntTSL 2 BASIC19.25■□□□□ 0.67
TMEM129A0AVI4 LEFTY1-201ENST00000272134 1626 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
TMEM129A0AVI4 NKX2-5-201ENST00000329198 1709 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
TMEM129A0AVI4 GJB6-203ENST00000400065 1805 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
TMEM129A0AVI4 PXK-211ENST00000484288 2031 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
TMEM129A0AVI4 ST3GAL5-222ENST00000638572 4431 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
TMEM129A0AVI4 PPP1CC-201ENST00000335007 2559 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
TMEM129A0AVI4 CITED2-202ENST00000536159 1797 ntAPPRIS P1 TSL 3 BASIC19.25■□□□□ 0.67
TMEM129A0AVI4 AL353743.1-201ENST00000637846 1769 ntTSL 5 BASIC19.25■□□□□ 0.67
TMEM129A0AVI4 KCNN1-204ENST00000615435 1691 ntAPPRIS ALT1 TSL 5 BASIC19.25■□□□□ 0.67
TMEM129A0AVI4 CCDC107-203ENST00000378407 899 ntAPPRIS ALT2 TSL 2 BASIC19.25■□□□□ 0.67
TMEM129A0AVI4 AL355987.3-201ENST00000456614 735 ntAPPRIS P1 TSL 4 BASIC19.25■□□□□ 0.67
TMEM129A0AVI4 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
TMEM129A0AVI4 KCTD13-207ENST00000568000 2528 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
TMEM129A0AVI4 SGTA-201ENST00000221566 2330 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
TMEM129A0AVI4 DISC1-213ENST00000537876 2349 ntAPPRIS ALT2 TSL 2 BASIC19.25■□□□□ 0.67
TMEM129A0AVI4 RASGRP2-207ENST00000377497 2221 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
TMEM129A0AVI4 DNAJC7-203ENST00000457167 2022 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
TMEM129A0AVI4 TEAD2-210ENST00000601519 2167 ntAPPRIS ALT1 TSL 1 (best) BASIC19.25■□□□□ 0.67
TMEM129A0AVI4 SAP30L-201ENST00000297109 6226 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
TMEM129A0AVI4 FUS-210ENST00000568685 1785 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
TMEM129A0AVI4 IRX4-207ENST00000613726 2403 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
TMEM129A0AVI4 NEK3-208ENST00000618534 2414 ntAPPRIS P2 TSL 5 BASIC19.24■□□□□ 0.67
TMEM129A0AVI4 PPAN-201ENST00000253107 1657 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
TMEM129A0AVI4 ALDH5A1-204ENST00000491546 1699 ntTSL 5 BASIC19.24■□□□□ 0.67
TMEM129A0AVI4 SPPL2B-211ENST00000614794 1559 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
TMEM129A0AVI4 ABHD16B-201ENST00000369916 1491 ntAPPRIS P1 BASIC19.24■□□□□ 0.67
TMEM129A0AVI4 SPNS1-203ENST00000334536 2027 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
TMEM129A0AVI4 NTNG2-202ENST00000393229 4792 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
TMEM129A0AVI4 CASP9-203ENST00000375890 1351 ntTSL 2 BASIC19.24■□□□□ 0.67
TMEM129A0AVI4 CBWD6-213ENST00000613716 1820 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
TMEM129A0AVI4 AC006455.2-201ENST00000429931 906 ntBASIC19.24■□□□□ 0.67
TMEM129A0AVI4 PPP1R14A-205ENST00000591585 949 ntTSL 2 BASIC19.24■□□□□ 0.67
TMEM129A0AVI4 MTMR9LP-204ENST00000441044 2624 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
TMEM129A0AVI4 GLT1D1-204ENST00000442111 2995 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
TMEM129A0AVI4 SLC30A5-201ENST00000380860 1317 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
TMEM129A0AVI4 HMOX1-201ENST00000216117 1822 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
TMEM129A0AVI4 CD6-203ENST00000352009 1809 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
TMEM129A0AVI4 METTL21A-210ENST00000458426 1366 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
TMEM129A0AVI4 MIR210HG-201ENST00000500447 1965 ntTSL 2 BASIC19.23■□□□□ 0.67
TMEM129A0AVI4 MRPS2-202ENST00000371785 1640 ntAPPRIS P1 TSL 3 BASIC19.23■□□□□ 0.67
TMEM129A0AVI4 B4GALNT1-202ENST00000418555 1861 ntTSL 2 BASIC19.23■□□□□ 0.67
TMEM129A0AVI4 AC009097.2-201ENST00000562763 465 ntTSL 2 BASIC19.23■□□□□ 0.67
TMEM129A0AVI4 WNT10A-201ENST00000258411 2547 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
TMEM129A0AVI4 LAMP5-AS1-201ENST00000443469 1928 ntTSL 2 BASIC19.23■□□□□ 0.67
TMEM129A0AVI4 FAM118B-209ENST00000533050 2402 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
TMEM129A0AVI4 TMEM129-201ENST00000303277 2678 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
TMEM129A0AVI4 FNDC10-201ENST00000422725 2085 ntAPPRIS P1 BASIC19.23■□□□□ 0.67
TMEM129A0AVI4 PRICKLE3-206ENST00000599218 2062 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
TMEM129A0AVI4 OXCT2-201ENST00000327582 1826 ntAPPRIS P1 BASIC19.23■□□□□ 0.67
TMEM129A0AVI4 WNT10B-202ENST00000403957 1817 ntTSL 5 BASIC19.23■□□□□ 0.67
TMEM129A0AVI4 SYF2-201ENST00000236273 1345 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
TMEM129A0AVI4 AC074143.1-203ENST00000518227 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
TMEM129A0AVI4 SLC35A2-210ENST00000616181 1614 ntTSL 2 BASIC19.22■□□□□ 0.67
TMEM129A0AVI4 LGALS9B-201ENST00000324290 1243 ntAPPRIS P2 TSL 5 BASIC19.22■□□□□ 0.67
TMEM129A0AVI4 PTCHD3P2-201ENST00000424937 1205 ntBASIC19.22■□□□□ 0.67
TMEM129A0AVI4 SUDS3P1-201ENST00000505831 966 ntBASIC19.22■□□□□ 0.67
TMEM129A0AVI4 ARFIP2-205ENST00000525235 852 ntTSL 2 BASIC19.22■□□□□ 0.67
TMEM129A0AVI4 NEDD4L-237ENST00000617539 728 ntTSL 2 BASIC19.22■□□□□ 0.67
TMEM129A0AVI4 BARX2-201ENST00000281437 1813 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
TMEM129A0AVI4 MAPRE3-203ENST00000405074 1801 ntTSL 3 BASIC19.22■□□□□ 0.67
TMEM129A0AVI4 CCNL1-203ENST00000461804 1998 ntTSL 2 BASIC19.22■□□□□ 0.67
TMEM129A0AVI4 CCDC106-207ENST00000591578 1592 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
TMEM129A0AVI4 UBE2Q1-201ENST00000292211 3210 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
TMEM129A0AVI4 LINC01011-201ENST00000445000 2811 ntTSL 2 BASIC19.22■□□□□ 0.67
TMEM129A0AVI4 LINC02175-201ENST00000571219 1875 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
TMEM129A0AVI4 ERMP1-202ENST00000339450 5376 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
TMEM129A0AVI4 METTL1-202ENST00000324871 2066 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
TMEM129A0AVI4 DMRTA2-202ENST00000418121 2840 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
TMEM129A0AVI4 MFSD14C-208ENST00000637864 1802 ntAPPRIS ALT2 TSL 2 BASIC19.21■□□□□ 0.67
TMEM129A0AVI4 PRADC1-201ENST00000258083 1083 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
TMEM129A0AVI4 MLF2-206ENST00000539187 1110 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
TMEM129A0AVI4 AC110285.2-201ENST00000571724 1565 ntTSL 2 BASIC19.21■□□□□ 0.67
TMEM129A0AVI4 AC010336.5-201ENST00000594308 317 ntTSL 3 BASIC19.21■□□□□ 0.67
TMEM129A0AVI4 ZNF264-206ENST00000600531 774 ntTSL 2 BASIC19.21■□□□□ 0.67
TMEM129A0AVI4 SEPT5-209ENST00000438754 2241 ntTSL 2 BASIC19.21■□□□□ 0.67
TMEM129A0AVI4 FAM3A-208ENST00000419205 1763 ntTSL 2 BASIC19.21■□□□□ 0.67
TMEM129A0AVI4 PFKFB3-216ENST00000625260 1752 ntAPPRIS ALT1 TSL 5 BASIC19.21■□□□□ 0.67
TMEM129A0AVI4 IGFBP1-202ENST00000457280 1601 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
TMEM129A0AVI4 UBR2-203ENST00000372903 2423 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
TMEM129A0AVI4 KIRREL2-201ENST00000262625 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
TMEM129A0AVI4 ST3GAL4-209ENST00000526727 1967 ntAPPRIS ALT1 TSL 1 (best) BASIC19.21■□□□□ 0.67
TMEM129A0AVI4 RARG-201ENST00000338561 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC19.21■□□□□ 0.67
TMEM129A0AVI4 CHRAC1-203ENST00000519533 1678 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
TMEM129A0AVI4 PHACTR2-203ENST00000367584 2490 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
TMEM129A0AVI4 TBX1-203ENST00000359500 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 30.7 ms