Protein–RNA interactions for Protein: A0A1W2PPF3

DUXB, Double homeobox B, humanhuman

Predictions only

Length 345 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DUXBA0A1W2PPF3 LINC01006-201ENST00000333319 2292 ntBASIC17.4■□□□□ 0.38
DUXBA0A1W2PPF3 CREB3-201ENST00000353704 1832 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
DUXBA0A1W2PPF3 FAM110A-206ENST00000541082 1614 ntAPPRIS P1 TSL 3 BASIC17.39■□□□□ 0.38
DUXBA0A1W2PPF3 CXCR3-201ENST00000373691 1861 ntTSL 1 (best) BASIC17.39■□□□□ 0.38
DUXBA0A1W2PPF3 AC009014.1-201ENST00000607574 1667 ntAPPRIS P1 BASIC17.39■□□□□ 0.37
DUXBA0A1W2PPF3 NAE1-203ENST00000379463 1909 ntTSL 2 BASIC17.39■□□□□ 0.37
DUXBA0A1W2PPF3 PKMYT1-201ENST00000262300 2171 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
DUXBA0A1W2PPF3 GRB10-206ENST00000402497 2289 ntTSL 5 BASIC17.39■□□□□ 0.37
DUXBA0A1W2PPF3 FOXD4L3-201ENST00000342833 2039 ntAPPRIS P1 BASIC17.39■□□□□ 0.37
DUXBA0A1W2PPF3 ROR1-201ENST00000371079 5832 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.37
DUXBA0A1W2PPF3 TMEM17-201ENST00000335390 1797 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
DUXBA0A1W2PPF3 IGFBP6-201ENST00000301464 1169 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.37
DUXBA0A1W2PPF3 RFLNA-202ENST00000338359 652 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.37
DUXBA0A1W2PPF3 BX664725.1-201ENST00000438252 379 ntBASIC17.39■□□□□ 0.37
DUXBA0A1W2PPF3 PRELID1-203ENST00000503216 1171 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
DUXBA0A1W2PPF3 AC103834.1-201ENST00000520383 144 ntBASIC17.39■□□□□ 0.37
DUXBA0A1W2PPF3 LRRK1-208ENST00000532029 1241 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
DUXBA0A1W2PPF3 PTRH1-208ENST00000543175 814 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
DUXBA0A1W2PPF3 NES-201ENST00000368223 5558 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
DUXBA0A1W2PPF3 DYM-203ENST00000442713 2147 ntTSL 2 BASIC17.39■□□□□ 0.37
DUXBA0A1W2PPF3 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
DUXBA0A1W2PPF3 ME2-202ENST00000382927 2492 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
DUXBA0A1W2PPF3 SNUPN-205ENST00000564644 1931 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.37
DUXBA0A1W2PPF3 GRINA-201ENST00000313269 1968 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
DUXBA0A1W2PPF3 RFXAP-201ENST00000255476 2304 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
DUXBA0A1W2PPF3 SLC4A4-201ENST00000264485 5852 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
DUXBA0A1W2PPF3 SMIM19-203ENST00000417410 1466 ntAPPRIS P1 TSL 2 BASIC17.38■□□□□ 0.37
DUXBA0A1W2PPF3 EXOC3L2-202ENST00000413988 2964 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
DUXBA0A1W2PPF3 BCKDK-201ENST00000219794 2128 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
DUXBA0A1W2PPF3 FARSA-201ENST00000314606 1814 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
DUXBA0A1W2PPF3 EMILIN2-201ENST00000254528 5910 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
DUXBA0A1W2PPF3 KCNK6-201ENST00000263372 5722 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
DUXBA0A1W2PPF3 IGFBP7-203ENST00000514062 1251 ntAPPRIS ALT2 TSL 2 BASIC17.38■□□□□ 0.37
DUXBA0A1W2PPF3 C12orf75-207ENST00000552457 689 ntTSL 5 BASIC17.38■□□□□ 0.37
DUXBA0A1W2PPF3 SNX5-219ENST00000606602 885 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
DUXBA0A1W2PPF3 POLD2-218ENST00000610533 1619 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
DUXBA0A1W2PPF3 FAM83H-201ENST00000388913 5654 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
DUXBA0A1W2PPF3 TMEM178A-201ENST00000281961 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
DUXBA0A1W2PPF3 AP000679.1-202ENST00000319763 2081 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
DUXBA0A1W2PPF3 PPP3CC-203ENST00000397775 2094 ntTSL 2 BASIC17.38■□□□□ 0.37
DUXBA0A1W2PPF3 SMPDL3A-203ENST00000539041 1755 ntTSL 2 BASIC17.38■□□□□ 0.37
DUXBA0A1W2PPF3 FAM47E-201ENST00000424749 1484 ntAPPRIS P3 TSL 5 BASIC17.37■□□□□ 0.37
DUXBA0A1W2PPF3 GLT1D1-204ENST00000442111 2995 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
DUXBA0A1W2PPF3 MLST8-202ENST00000382450 1861 ntAPPRIS ALT1 TSL 2 BASIC17.37■□□□□ 0.37
DUXBA0A1W2PPF3 MLST8-215ENST00000564088 1861 ntAPPRIS P3 TSL 2 BASIC17.37■□□□□ 0.37
DUXBA0A1W2PPF3 MFSD3-201ENST00000301327 1548 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
DUXBA0A1W2PPF3 KANK3-203ENST00000593649 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
DUXBA0A1W2PPF3 KCNS3-201ENST00000304101 2333 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
DUXBA0A1W2PPF3 KRT3-201ENST00000417996 2319 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
DUXBA0A1W2PPF3 OBSL1-204ENST00000404537 5841 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
DUXBA0A1W2PPF3 TRIM7-202ENST00000334421 1228 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
DUXBA0A1W2PPF3 GUCD1-202ENST00000402766 865 ntTSL 2 BASIC17.37■□□□□ 0.37
DUXBA0A1W2PPF3 AC084116.4-201ENST00000524320 484 ntTSL 2 BASIC17.37■□□□□ 0.37
DUXBA0A1W2PPF3 AC138207.2-201ENST00000583377 492 ntTSL 2 BASIC17.37■□□□□ 0.37
DUXBA0A1W2PPF3 AL031848.2-201ENST00000607670 837 ntBASIC17.37■□□□□ 0.37
DUXBA0A1W2PPF3 SAXO1-201ENST00000380530 1727 ntAPPRIS ALT2 TSL 2 BASIC17.37■□□□□ 0.37
DUXBA0A1W2PPF3 PBX1-222ENST00000627490 1769 ntTSL 2 BASIC17.37■□□□□ 0.37
DUXBA0A1W2PPF3 CAMK2N2-201ENST00000296238 1362 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
DUXBA0A1W2PPF3 NR2F2-201ENST00000394166 5275 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
DUXBA0A1W2PPF3 CENPS-CORT-201ENST00000400900 1469 ntTSL 2 BASIC17.37■□□□□ 0.37
DUXBA0A1W2PPF3 TDRP-202ENST00000427263 2465 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
DUXBA0A1W2PPF3 USP39-203ENST00000409470 2034 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
DUXBA0A1W2PPF3 ARFRP1-214ENST00000622789 2559 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
DUXBA0A1W2PPF3 MATN4-204ENST00000372756 2077 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
DUXBA0A1W2PPF3 HEY2-201ENST00000368364 2678 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
DUXBA0A1W2PPF3 GUCY1A3-210ENST00000513574 2656 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
DUXBA0A1W2PPF3 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
DUXBA0A1W2PPF3 HPCAL1-201ENST00000307845 1751 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
DUXBA0A1W2PPF3 NRXN2-201ENST00000265459 6621 ntAPPRIS P3 TSL 5 BASIC17.36■□□□□ 0.37
DUXBA0A1W2PPF3 TTYH3-201ENST00000258796 4840 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
DUXBA0A1W2PPF3 NR1H2-204ENST00000593926 1828 ntAPPRIS P2 TSL 5 BASIC17.36■□□□□ 0.37
DUXBA0A1W2PPF3 FDFT1-210ENST00000525954 1890 ntTSL 2 BASIC17.36■□□□□ 0.37
DUXBA0A1W2PPF3 HSD17B14-201ENST00000263278 1238 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
DUXBA0A1W2PPF3 GUK1-208ENST00000366728 842 ntTSL 2 BASIC17.36■□□□□ 0.37
DUXBA0A1W2PPF3 OIP5-AS1-208ENST00000560706 473 ntTSL 5 BASIC17.36■□□□□ 0.37
DUXBA0A1W2PPF3 AL034346.1-201ENST00000568244 1277 ntBASIC17.36■□□□□ 0.37
DUXBA0A1W2PPF3 CENPU-201ENST00000281453 1998 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
DUXBA0A1W2PPF3 C7orf26-201ENST00000344417 2182 ntAPPRIS P1 TSL 2 BASIC17.36■□□□□ 0.37
DUXBA0A1W2PPF3 CYP27A1-201ENST00000258415 2286 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
DUXBA0A1W2PPF3 DET1-201ENST00000268148 2267 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
DUXBA0A1W2PPF3 ZNF467-201ENST00000302017 2553 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
DUXBA0A1W2PPF3 NR2F2-204ENST00000453270 1712 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
DUXBA0A1W2PPF3 CEBPA-201ENST00000498907 2631 ntAPPRIS P1 BASIC17.35■□□□□ 0.37
DUXBA0A1W2PPF3 GABARAPL3-202ENST00000624044 1851 ntBASIC17.35■□□□□ 0.37
DUXBA0A1W2PPF3 BICRA-204ENST00000614245 5697 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
DUXBA0A1W2PPF3 SOHLH1-201ENST00000298466 1987 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
DUXBA0A1W2PPF3 ZNF821-202ENST00000425432 2000 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
DUXBA0A1W2PPF3 SDHAF3-202ENST00000432641 2060 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
DUXBA0A1W2PPF3 JPT1-206ENST00000476258 2289 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
DUXBA0A1W2PPF3 WBP1-203ENST00000409737 1110 ntAPPRIS ALT1 TSL 5 BASIC17.35■□□□□ 0.37
DUXBA0A1W2PPF3 FAM66C-205ENST00000456135 1216 ntTSL 5 BASIC17.35■□□□□ 0.37
DUXBA0A1W2PPF3 CDC42BPB-201ENST00000361246 6758 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
DUXBA0A1W2PPF3 MAPK9-202ENST00000347470 1509 ntTSL 5 BASIC17.35■□□□□ 0.37
DUXBA0A1W2PPF3 ACSL1-205ENST00000504900 1583 ntTSL 5 BASIC17.35■□□□□ 0.37
DUXBA0A1W2PPF3 GOLGA6L9-202ENST00000618348 1710 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
DUXBA0A1W2PPF3 IRF7-201ENST00000330243 1992 ntAPPRIS P4 TSL 5 BASIC17.35■□□□□ 0.37
DUXBA0A1W2PPF3 ADAMTS2-202ENST00000274609 2044 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
DUXBA0A1W2PPF3 C17orf67-201ENST00000397861 2013 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
DUXBA0A1W2PPF3 TAF6L-201ENST00000294168 2116 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
DUXBA0A1W2PPF3 RTP5-201ENST00000343216 2296 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 19.5 ms