Protein–RNA interactions for Protein: A0A0D9SF12

CCDC163, Coiled-coil domain-containing 163, humanhuman

Predictions only

Length 145 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC163A0A0D9SF12 CSNK1G3-206ENST00000511130 1356 ntTSL 2 BASIC21.3■■□□□ 1
CCDC163A0A0D9SF12 SMPD5-201ENST00000528912 1390 ntTSL 5 BASIC21.3■■□□□ 1
CCDC163A0A0D9SF12 TBC1D10A-201ENST00000215790 2077 ntAPPRIS P3 TSL 1 (best) BASIC21.3■■□□□ 1
CCDC163A0A0D9SF12 ANKRD53-201ENST00000272421 2185 ntAPPRIS P3 TSL 1 (best) BASIC21.3■■□□□ 1
CCDC163A0A0D9SF12 CEBPD-201ENST00000408965 2178 ntAPPRIS P1 BASIC21.3■■□□□ 1
CCDC163A0A0D9SF12 SERTAD3-201ENST00000322354 1734 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
CCDC163A0A0D9SF12 PGF-206ENST00000555567 1927 ntAPPRIS P3 TSL 1 (best) BASIC21.29■■□□□ 1
CCDC163A0A0D9SF12 ABHD8-201ENST00000247706 2090 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
CCDC163A0A0D9SF12 HSD11B1L-201ENST00000301382 1457 ntTSL 1 (best) BASIC21.29■■□□□ 1
CCDC163A0A0D9SF12 THAP7-201ENST00000215742 1213 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
CCDC163A0A0D9SF12 AC114730.1-201ENST00000400768 472 ntTSL 4 BASIC21.29■■□□□ 1
CCDC163A0A0D9SF12 NDUFB2-203ENST00000461457 559 ntTSL 3 BASIC21.29■■□□□ 1
CCDC163A0A0D9SF12 SEC23A-213ENST00000557280 561 ntTSL 4 BASIC21.29■■□□□ 1
CCDC163A0A0D9SF12 AP2S1-207ENST00000599990 829 ntAPPRIS ALT1 TSL 2 BASIC21.29■■□□□ 1
CCDC163A0A0D9SF12 AL591742.1-201ENST00000604433 565 ntBASIC21.29■■□□□ 1
CCDC163A0A0D9SF12 TMEM185A-207ENST00000600449 2840 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
CCDC163A0A0D9SF12 PPP1R26-201ENST00000356818 4932 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
CCDC163A0A0D9SF12 RNF166-202ENST00000537718 1525 ntTSL 2 BASIC21.29■■□□□ 1
CCDC163A0A0D9SF12 SNX5-201ENST00000377759 2270 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
CCDC163A0A0D9SF12 P2RX2-201ENST00000343948 1494 ntAPPRIS P4 TSL 1 (best) BASIC21.28■■□□□ 1
CCDC163A0A0D9SF12 C5orf49-201ENST00000399810 2385 ntAPPRIS P2 TSL 1 (best) BASIC21.28■■□□□ 1
CCDC163A0A0D9SF12 RARRES2-201ENST00000223271 740 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
CCDC163A0A0D9SF12 CKLF-201ENST00000264001 669 ntAPPRIS P4 TSL 1 (best) BASIC21.28■■□□□ 1
CCDC163A0A0D9SF12 BET1L-207ENST00000529614 560 ntTSL 5 BASIC21.28■■□□□ 1
CCDC163A0A0D9SF12 AC142381.4-202ENST00000563973 229 ntBASIC21.28■■□□□ 1
CCDC163A0A0D9SF12 AC006058.3-201ENST00000606217 1069 ntBASIC21.28■■□□□ 1
CCDC163A0A0D9SF12 ADIPOR1-201ENST00000340990 2177 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
CCDC163A0A0D9SF12 PARP9-207ENST00000492382 1837 ntTSL 1 (best) BASIC21.27■■□□□ 1
CCDC163A0A0D9SF12 PRR16-202ENST00000407149 1747 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
CCDC163A0A0D9SF12 TMEM102-201ENST00000323206 1973 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
CCDC163A0A0D9SF12 TMEM102-202ENST00000396568 1962 ntAPPRIS P1 TSL 2 BASIC21.27■■□□□ 1
CCDC163A0A0D9SF12 PLPP7-201ENST00000372261 972 ntTSL 2 BASIC21.27■■□□□ 1
CCDC163A0A0D9SF12 CBY3-201ENST00000376974 785 ntAPPRIS P1 TSL 2 BASIC21.27■■□□□ 1
CCDC163A0A0D9SF12 CCDC107-206ENST00000426546 1242 ntAPPRIS P3 TSL 1 (best) BASIC21.27■■□□□ 1
CCDC163A0A0D9SF12 HAGLR-207ENST00000452365 661 ntTSL 4 BASIC21.27■■□□□ 1
CCDC163A0A0D9SF12 AC128676.1-201ENST00000454392 318 ntBASIC21.27■■□□□ 1
CCDC163A0A0D9SF12 RPS2P4-201ENST00000476944 856 ntBASIC21.27■■□□□ 1
CCDC163A0A0D9SF12 TMEM179B-205ENST00000533861 797 ntTSL 5 BASIC21.27■■□□□ 1
CCDC163A0A0D9SF12 SLC25A29-201ENST00000359232 2385 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
CCDC163A0A0D9SF12 HEXDC-202ENST00000337014 2285 ntTSL 1 (best) BASIC21.27■■□□□ 1
CCDC163A0A0D9SF12 KRT16P2-201ENST00000414673 1423 ntBASIC21.27■■□□□ 1
CCDC163A0A0D9SF12 CASP16P-201ENST00000428155 1433 ntTSL 1 (best) BASIC21.27■■□□□ 1
CCDC163A0A0D9SF12 AC010980.2-201ENST00000587099 1412 ntBASIC21.27■■□□□ 1
CCDC163A0A0D9SF12 CBWD3-202ENST00000377342 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC21.27■■□□□ 1
CCDC163A0A0D9SF12 NKX6-3-202ENST00000524115 1683 ntTSL 2 BASIC21.27■■□□□ 1
CCDC163A0A0D9SF12 RAB28-201ENST00000288723 1810 ntAPPRIS P3 TSL 1 (best) BASIC21.27■□□□□ 0.99
CCDC163A0A0D9SF12 AC092068.2-201ENST00000590491 1708 ntBASIC21.26■□□□□ 0.99
CCDC163A0A0D9SF12 ABCB10P4-201ENST00000566803 2184 ntBASIC21.26■□□□□ 0.99
CCDC163A0A0D9SF12 TNIP2-203ENST00000503235 1653 ntTSL 3 BASIC21.26■□□□□ 0.99
CCDC163A0A0D9SF12 PSPN-201ENST00000245810 471 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
CCDC163A0A0D9SF12 NUDT22-201ENST00000279206 1094 ntAPPRIS P3 TSL 1 (best) BASIC21.26■□□□□ 0.99
CCDC163A0A0D9SF12 DUSP23-201ENST00000368107 756 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
CCDC163A0A0D9SF12 FAM167B-201ENST00000373582 936 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
CCDC163A0A0D9SF12 SEC61A2-206ENST00000379051 707 ntTSL 3 BASIC21.26■□□□□ 0.99
CCDC163A0A0D9SF12 GTF2A2-203ENST00000396061 758 ntAPPRIS P1 TSL 2 BASIC21.26■□□□□ 0.99
CCDC163A0A0D9SF12 GNAS-AS1-201ENST00000424094 1156 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
CCDC163A0A0D9SF12 NUDT22-204ENST00000441250 986 ntAPPRIS ALT2 TSL 5 BASIC21.26■□□□□ 0.99
CCDC163A0A0D9SF12 STPG4-207ENST00000445927 891 ntAPPRIS P1 TSL 5 BASIC21.26■□□□□ 0.99
CCDC163A0A0D9SF12 AL365295.1-202ENST00000456100 562 ntTSL 4 BASIC21.26■□□□□ 0.99
CCDC163A0A0D9SF12 PBX1-209ENST00000485769 834 ntTSL 2 BASIC21.26■□□□□ 0.99
CCDC163A0A0D9SF12 AC243732.1-201ENST00000612648 864 ntBASIC21.26■□□□□ 0.99
CCDC163A0A0D9SF12 MMD2-204ENST00000612910 778 ntTSL 5 BASIC21.26■□□□□ 0.99
CCDC163A0A0D9SF12 AC093762.2-201ENST00000641700 291 ntAPPRIS P1 BASIC21.26■□□□□ 0.99
CCDC163A0A0D9SF12 CNPY3-201ENST00000372836 1704 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
CCDC163A0A0D9SF12 MXI1-201ENST00000239007 2424 ntAPPRIS ALT1 TSL 1 (best) BASIC21.26■□□□□ 0.99
CCDC163A0A0D9SF12 QTRT1-201ENST00000250237 1317 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
CCDC163A0A0D9SF12 SRI-201ENST00000265729 2010 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
CCDC163A0A0D9SF12 ZDHHC1-201ENST00000348579 2047 ntAPPRIS P2 TSL 1 (best) BASIC21.26■□□□□ 0.99
CCDC163A0A0D9SF12 OTUD5-208ENST00000610466 2487 ntTSL 5 BASIC21.26■□□□□ 0.99
CCDC163A0A0D9SF12 GPR150-201ENST00000380007 2065 ntAPPRIS P1 BASIC21.25■□□□□ 0.99
CCDC163A0A0D9SF12 TMEM64-201ENST00000418210 4663 ntTSL 2 BASIC21.25■□□□□ 0.99
CCDC163A0A0D9SF12 KIAA2013-201ENST00000376572 2815 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
CCDC163A0A0D9SF12 TMEM185B-201ENST00000426077 2131 ntAPPRIS P1 BASIC21.25■□□□□ 0.99
CCDC163A0A0D9SF12 VSTM4-201ENST00000298454 2170 ntAPPRIS P3 TSL 2 BASIC21.25■□□□□ 0.99
CCDC163A0A0D9SF12 TRPT1-201ENST00000317459 962 ntAPPRIS P3 TSL 1 (best) BASIC21.25■□□□□ 0.99
CCDC163A0A0D9SF12 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC21.25■□□□□ 0.99
CCDC163A0A0D9SF12 AC096537.1-201ENST00000437416 684 ntTSL 5 BASIC21.25■□□□□ 0.99
CCDC163A0A0D9SF12 AL158047.1-201ENST00000445918 881 ntBASIC21.25■□□□□ 0.99
CCDC163A0A0D9SF12 CFL1-211ENST00000531407 1062 ntTSL 2 BASIC21.25■□□□□ 0.99
CCDC163A0A0D9SF12 SCN1B-203ENST00000595652 814 ntTSL 2 BASIC21.25■□□□□ 0.99
CCDC163A0A0D9SF12 INO80E-214ENST00000620599 515 ntTSL 2 BASIC21.25■□□□□ 0.99
CCDC163A0A0D9SF12 UXS1-201ENST00000283148 2099 ntAPPRIS ALT1 TSL 2 BASIC21.25■□□□□ 0.99
CCDC163A0A0D9SF12 IGSF21-201ENST00000251296 1943 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
CCDC163A0A0D9SF12 HAUS4-205ENST00000541587 1637 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
CCDC163A0A0D9SF12 FUZ-212ENST00000528094 1479 ntTSL 2 BASIC21.25■□□□□ 0.99
CCDC163A0A0D9SF12 TMEM176B-203ENST00000434545 1303 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
CCDC163A0A0D9SF12 YBX1-201ENST00000321358 1514 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
CCDC163A0A0D9SF12 MRPL38-201ENST00000309352 1888 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
CCDC163A0A0D9SF12 PRSS29P-202ENST00000568091 1864 ntTSL 5 BASIC21.24■□□□□ 0.99
CCDC163A0A0D9SF12 LINC00526-201ENST00000581067 1875 ntBASIC21.24■□□□□ 0.99
CCDC163A0A0D9SF12 FAM220A-201ENST00000313324 2214 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
CCDC163A0A0D9SF12 AK8-201ENST00000298545 2072 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
CCDC163A0A0D9SF12 NABP2-203ENST00000380198 1775 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
CCDC163A0A0D9SF12 SYNE2-201ENST00000341472 1132 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
CCDC163A0A0D9SF12 CALML5-201ENST00000380332 859 ntAPPRIS P1 BASIC21.24■□□□□ 0.99
CCDC163A0A0D9SF12 RNF146-206ENST00000480444 843 ntTSL 2 BASIC21.24■□□□□ 0.99
CCDC163A0A0D9SF12 AC026366.1-201ENST00000488803 879 ntBASIC21.24■□□□□ 0.99
CCDC163A0A0D9SF12 UNC93B5-201ENST00000530315 699 ntBASIC21.24■□□□□ 0.99
CCDC163A0A0D9SF12 C14orf144-202ENST00000555282 854 ntTSL 3 BASIC21.24■□□□□ 0.99
CCDC163A0A0D9SF12 KCTD5-201ENST00000301738 2482 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Retrieved 100 of 98,524 protein–RNA pairs in 17.3 ms