Protein–RNA interactions for Protein: A0A0B4J273

TRAV34, T-cell receptor alpha variable 34 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV34A0A0B4J273 CBWD1-203ENST00000377400 1792 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
TRAV34A0A0B4J273 PHLDA1-202ENST00000602540 5741 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
TRAV34A0A0B4J273 PAQR6-213ENST00000612424 2037 ntTSL 2 BASIC16.43■□□□□ 0.22
TRAV34A0A0B4J273 CFAP99-206ENST00000616117 1941 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
TRAV34A0A0B4J273 AMZ2-219ENST00000612294 1498 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
TRAV34A0A0B4J273 IKBKG-206ENST00000594239 2299 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
TRAV34A0A0B4J273 BID-215ENST00000622694 2199 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
TRAV34A0A0B4J273 PPP1R14A-201ENST00000301242 777 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
TRAV34A0A0B4J273 PVT1_1.1-201ENST00000615125 194 ntBASIC16.43■□□□□ 0.22
TRAV34A0A0B4J273 FAM167A-204ENST00000528897 1620 ntAPPRIS P1 TSL 2 BASIC16.43■□□□□ 0.22
TRAV34A0A0B4J273 PSIP1-201ENST00000380715 1966 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
TRAV34A0A0B4J273 KRT3-201ENST00000417996 2319 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
TRAV34A0A0B4J273 CHRNB2-205ENST00000637900 2390 ntAPPRIS ALT1 TSL 5 BASIC16.43■□□□□ 0.22
TRAV34A0A0B4J273 BCAM-201ENST00000270233 2402 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
TRAV34A0A0B4J273 BTBD17-201ENST00000375366 1805 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
TRAV34A0A0B4J273 CNTD2-202ENST00000430325 1817 ntAPPRIS P2 TSL 2 BASIC16.42■□□□□ 0.22
TRAV34A0A0B4J273 GFER-201ENST00000248114 2345 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
TRAV34A0A0B4J273 SPATA5L1-201ENST00000305560 2570 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
TRAV34A0A0B4J273 JAK2-201ENST00000381652 5285 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
TRAV34A0A0B4J273 COMT-206ENST00000407537 1457 ntAPPRIS P3 TSL 5 BASIC16.42■□□□□ 0.22
TRAV34A0A0B4J273 ST3GAL3-207ENST00000353126 1969 ntTSL 5 BASIC16.42■□□□□ 0.22
TRAV34A0A0B4J273 RASGRP2-207ENST00000377497 2221 ntAPPRIS P2 TSL 1 (best) BASIC16.42■□□□□ 0.22
TRAV34A0A0B4J273 SEPT5-209ENST00000438754 2241 ntTSL 2 BASIC16.42■□□□□ 0.22
TRAV34A0A0B4J273 SMARCC1-201ENST00000254480 6375 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
TRAV34A0A0B4J273 TSPAN3-202ENST00000346495 1647 ntTSL 2 BASIC16.42■□□□□ 0.22
TRAV34A0A0B4J273 ADGRA3-204ENST00000502482 2870 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
TRAV34A0A0B4J273 SNUPN-207ENST00000567134 1641 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
TRAV34A0A0B4J273 FAM3C-201ENST00000359943 2508 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
TRAV34A0A0B4J273 AC090377.1-201ENST00000585691 1762 ntTSL 3 BASIC16.42■□□□□ 0.22
TRAV34A0A0B4J273 AC096677.1-201ENST00000454651 1516 ntTSL 2 BASIC16.42■□□□□ 0.22
TRAV34A0A0B4J273 LRRC1-201ENST00000370882 808 ntTSL 3 BASIC16.42■□□□□ 0.22
TRAV34A0A0B4J273 SSX2IP-209ENST00000603677 1149 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
TRAV34A0A0B4J273 CA15P2-201ENST00000611168 834 ntBASIC16.42■□□□□ 0.22
TRAV34A0A0B4J273 ERO1A-211ENST00000629528 998 ntTSL 5 BASIC16.42■□□□□ 0.22
TRAV34A0A0B4J273 C1QTNF4-201ENST00000302514 1664 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
TRAV34A0A0B4J273 CDKN2C-203ENST00000396148 2086 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
TRAV34A0A0B4J273 FNDC10-201ENST00000422725 2085 ntAPPRIS P1 BASIC16.42■□□□□ 0.22
TRAV34A0A0B4J273 NFIB-207ENST00000397579 3129 ntTSL 5 BASIC16.42■□□□□ 0.22
TRAV34A0A0B4J273 MFSD7-202ENST00000347950 1599 ntTSL 2 BASIC16.42■□□□□ 0.22
TRAV34A0A0B4J273 PKIB-204ENST00000368448 1561 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
TRAV34A0A0B4J273 DPP7-201ENST00000371579 1590 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
TRAV34A0A0B4J273 ADAM33-203ENST00000379861 3674 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
TRAV34A0A0B4J273 C10orf55-202ENST00000412307 2360 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
TRAV34A0A0B4J273 ZFAND2B-201ENST00000289528 1314 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
TRAV34A0A0B4J273 C6orf89-201ENST00000355190 1309 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
TRAV34A0A0B4J273 CPEB1-AS1-201ENST00000560650 2138 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
TRAV34A0A0B4J273 ARSA-202ENST00000356098 1895 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
TRAV34A0A0B4J273 PXK-211ENST00000484288 2031 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
TRAV34A0A0B4J273 ARMC9-201ENST00000349938 2300 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
TRAV34A0A0B4J273 LINC01521-201ENST00000504184 1943 ntBASIC16.41■□□□□ 0.22
TRAV34A0A0B4J273 UBA5-208ENST00000473651 1513 ntTSL 5 BASIC16.41■□□□□ 0.22
TRAV34A0A0B4J273 SHB-201ENST00000377707 2783 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
TRAV34A0A0B4J273 C1orf174-201ENST00000361605 1666 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
TRAV34A0A0B4J273 ADARB1-201ENST00000348831 6882 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
TRAV34A0A0B4J273 C20orf24-203ENST00000373852 1059 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
TRAV34A0A0B4J273 AC119427.1-201ENST00000633182 556 ntTSL 4 BASIC16.41■□□□□ 0.22
TRAV34A0A0B4J273 CFP-202ENST00000377005 1435 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
TRAV34A0A0B4J273 TTC39C-202ENST00000317571 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
TRAV34A0A0B4J273 ATRN-201ENST00000262919 8633 ntAPPRIS P4 TSL 5 BASIC16.41■□□□□ 0.22
TRAV34A0A0B4J273 HOXA4-201ENST00000360046 1747 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
TRAV34A0A0B4J273 CD7-207ENST00000584284 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
TRAV34A0A0B4J273 INPP1-201ENST00000322522 1919 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
TRAV34A0A0B4J273 MEN1-202ENST00000315422 3148 ntAPPRIS ALT1 TSL 5 BASIC16.41■□□□□ 0.22
TRAV34A0A0B4J273 FAM91A1-207ENST00000521166 2706 ntTSL 2 BASIC16.4■□□□□ 0.22
TRAV34A0A0B4J273 MGAT4B-201ENST00000292591 2446 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
TRAV34A0A0B4J273 CERS4-205ENST00000558331 1803 ntTSL 5 BASIC16.4■□□□□ 0.22
TRAV34A0A0B4J273 NFATC2IP-201ENST00000320805 4569 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
TRAV34A0A0B4J273 DISC1-202ENST00000317586 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
TRAV34A0A0B4J273 BAG5-201ENST00000299204 4848 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
TRAV34A0A0B4J273 NUTM2D-201ENST00000381697 3290 ntAPPRIS P5 TSL 1 (best) BASIC16.4■□□□□ 0.22
TRAV34A0A0B4J273 ARID1B-203ENST00000350026 7962 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
TRAV34A0A0B4J273 SNX7-201ENST00000306121 1734 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
TRAV34A0A0B4J273 VSTM2A-202ENST00000402613 1076 ntTSL 2 BASIC16.4■□□□□ 0.22
TRAV34A0A0B4J273 MCRIP1-202ENST00000457257 942 ntTSL 3 BASIC16.4■□□□□ 0.22
TRAV34A0A0B4J273 ZNF606-203ENST00000547121 1196 ntTSL 2 BASIC16.4■□□□□ 0.22
TRAV34A0A0B4J273 PTPRF-216ENST00000617451 1129 ntTSL 5 BASIC16.4■□□□□ 0.22
TRAV34A0A0B4J273 BRSK1-201ENST00000309383 3079 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
TRAV34A0A0B4J273 SNRNP70-201ENST00000221448 1603 ntTSL 2 BASIC16.4■□□□□ 0.22
TRAV34A0A0B4J273 PAOX-206ENST00000480071 1324 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
TRAV34A0A0B4J273 GJB6-203ENST00000400065 1805 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
TRAV34A0A0B4J273 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC16.4■□□□□ 0.22
TRAV34A0A0B4J273 UNKL-205ENST00000397464 2180 ntTSL 2 BASIC16.4■□□□□ 0.22
TRAV34A0A0B4J273 IGFBP1-201ENST00000275525 1653 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
TRAV34A0A0B4J273 AC112229.4-201ENST00000488671 1528 ntTSL 2 BASIC16.4■□□□□ 0.22
TRAV34A0A0B4J273 AQP6-201ENST00000315520 1398 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
TRAV34A0A0B4J273 PRICKLE3-206ENST00000599218 2062 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
TRAV34A0A0B4J273 ARHGAP11A-205ENST00000563864 2279 ntTSL 5 BASIC16.39■□□□□ 0.21
TRAV34A0A0B4J273 LINC01116-201ENST00000295549 1407 ntTSL 2 BASIC16.39■□□□□ 0.21
TRAV34A0A0B4J273 ZNF503-AS2-202ENST00000466942 1430 ntTSL 2 BASIC16.39■□□□□ 0.21
TRAV34A0A0B4J273 AR-204ENST00000504326 3615 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
TRAV34A0A0B4J273 BHLHE22-201ENST00000321870 3262 ntAPPRIS P1 BASIC16.39■□□□□ 0.21
TRAV34A0A0B4J273 BEX3-202ENST00000372634 753 ntTSL 2 BASIC16.39■□□□□ 0.21
TRAV34A0A0B4J273 DUX4L4-201ENST00000566884 1269 ntBASIC16.39■□□□□ 0.21
TRAV34A0A0B4J273 AC116025.2-201ENST00000576632 443 ntTSL 3 BASIC16.39■□□□□ 0.21
TRAV34A0A0B4J273 DUSP22-214ENST00000605315 867 ntTSL 5 BASIC16.39■□□□□ 0.21
TRAV34A0A0B4J273 AC010913.1-201ENST00000608612 420 ntTSL 2 BASIC16.39■□□□□ 0.21
TRAV34A0A0B4J273 BARX2-201ENST00000281437 1813 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
TRAV34A0A0B4J273 PPP1R12B-212ENST00000480184 1808 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
TRAV34A0A0B4J273 NOM1-201ENST00000275820 6077 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
TRAV34A0A0B4J273 TMEM62-201ENST00000260403 2771 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 18.7 ms