Protein–RNA interactions for Protein: A0A0B4J246

TRAV8-4, T-cell receptor alpha variable 8-4 (Fragment), humanhuman

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV8-4A0A0B4J246 SHB-201ENST00000377707 2783 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
TRAV8-4A0A0B4J246 GMPPB-202ENST00000308388 1582 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
TRAV8-4A0A0B4J246 CREG2-201ENST00000324768 6383 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
TRAV8-4A0A0B4J246 P4HTM-202ENST00000383729 2127 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
TRAV8-4A0A0B4J246 CBWD5-207ENST00000382405 1791 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
TRAV8-4A0A0B4J246 SDSL-202ENST00000403593 1449 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
TRAV8-4A0A0B4J246 ZNF688-201ENST00000223459 2506 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
TRAV8-4A0A0B4J246 FOXP1-201ENST00000318779 843 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
TRAV8-4A0A0B4J246 ADAMTS13-203ENST00000371910 1074 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
TRAV8-4A0A0B4J246 AC105935.1-201ENST00000424174 422 ntTSL 3 BASIC14.86□□□□□ -0.03
TRAV8-4A0A0B4J246 TIE1-210ENST00000538015 1140 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
TRAV8-4A0A0B4J246 TMEM80-207ENST00000608174 800 ntTSL 5 BASIC14.86□□□□□ -0.03
TRAV8-4A0A0B4J246 SLC16A10-206ENST00000612036 1231 ntTSL 5 BASIC14.86□□□□□ -0.03
TRAV8-4A0A0B4J246 SLC35A3-216ENST00000639221 1032 ntTSL 5 BASIC14.86□□□□□ -0.03
TRAV8-4A0A0B4J246 MPND-202ENST00000359935 1475 ntAPPRIS ALT2 TSL 2 BASIC14.86□□□□□ -0.03
TRAV8-4A0A0B4J246 IRF3-207ENST00000593922 1494 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
TRAV8-4A0A0B4J246 WRAP73-201ENST00000270708 1665 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
TRAV8-4A0A0B4J246 DLGAP4-201ENST00000339266 5016 ntAPPRIS ALT2 TSL 5 BASIC14.86□□□□□ -0.03
TRAV8-4A0A0B4J246 SIRT7-201ENST00000328666 1743 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
TRAV8-4A0A0B4J246 LAYN-209ENST00000533265 1703 ntTSL 5 BASIC14.86□□□□□ -0.03
TRAV8-4A0A0B4J246 HHIPL1-201ENST00000330710 7390 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
TRAV8-4A0A0B4J246 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC14.86□□□□□ -0.03
TRAV8-4A0A0B4J246 FAM53B-201ENST00000280780 1568 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
TRAV8-4A0A0B4J246 AC233992.2-201ENST00000531225 1596 ntAPPRIS P1 TSL 2 BASIC14.85□□□□□ -0.03
TRAV8-4A0A0B4J246 SCRIB-201ENST00000320476 5143 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
TRAV8-4A0A0B4J246 MBD3-201ENST00000156825 5518 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
TRAV8-4A0A0B4J246 AC242852.2-201ENST00000615738 1807 ntBASIC14.85□□□□□ -0.03
TRAV8-4A0A0B4J246 DOK3-201ENST00000312943 2292 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
TRAV8-4A0A0B4J246 CELF5-201ENST00000292672 1854 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
TRAV8-4A0A0B4J246 DENND2D-202ENST00000369752 1894 ntAPPRIS ALT2 TSL 2 BASIC14.85□□□□□ -0.03
TRAV8-4A0A0B4J246 AC007326.4-201ENST00000638240 1669 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
TRAV8-4A0A0B4J246 HOXD4-201ENST00000306324 1464 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
TRAV8-4A0A0B4J246 NUDT18-201ENST00000611621 1497 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
TRAV8-4A0A0B4J246 FAM173A-201ENST00000219535 806 ntAPPRIS ALT2 TSL 2 BASIC14.85□□□□□ -0.03
TRAV8-4A0A0B4J246 AC055876.1-201ENST00000430589 895 ntTSL 2 BASIC14.85□□□□□ -0.03
TRAV8-4A0A0B4J246 GATA2-AS1-201ENST00000464242 1163 ntTSL 2 BASIC14.85□□□□□ -0.03
TRAV8-4A0A0B4J246 LRRK1-208ENST00000532029 1241 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
TRAV8-4A0A0B4J246 GRAMD4P7-201ENST00000578182 1232 ntBASIC14.85□□□□□ -0.03
TRAV8-4A0A0B4J246 MIR3621-201ENST00000580529 85 ntBASIC14.85□□□□□ -0.03
TRAV8-4A0A0B4J246 TYRO3-201ENST00000263798 8207 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
TRAV8-4A0A0B4J246 SAMD5-201ENST00000367474 6089 ntAPPRIS P1 TSL 2 BASIC14.85□□□□□ -0.03
TRAV8-4A0A0B4J246 PPFIA1-202ENST00000389547 4133 ntAPPRIS ALT1 TSL 1 (best) BASIC14.85□□□□□ -0.03
TRAV8-4A0A0B4J246 LENG1-201ENST00000222224 1542 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
TRAV8-4A0A0B4J246 AC096677.1-201ENST00000454651 1516 ntTSL 2 BASIC14.85□□□□□ -0.03
TRAV8-4A0A0B4J246 UBA5-208ENST00000473651 1513 ntTSL 5 BASIC14.85□□□□□ -0.03
TRAV8-4A0A0B4J246 SORCS3-201ENST00000369699 5530 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
TRAV8-4A0A0B4J246 SLC1A5-203ENST00000542575 2882 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
TRAV8-4A0A0B4J246 RANBP10-201ENST00000317506 5341 ntAPPRIS P2 TSL 1 (best) BASIC14.85□□□□□ -0.03
TRAV8-4A0A0B4J246 RANBP10-209ENST00000630626 5305 ntAPPRIS ALT2 TSL 5 BASIC14.85□□□□□ -0.03
TRAV8-4A0A0B4J246 COMT-203ENST00000403184 2217 ntTSL 2 BASIC14.85□□□□□ -0.03
TRAV8-4A0A0B4J246 METTL21A-210ENST00000458426 1366 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
TRAV8-4A0A0B4J246 ADRM1-205ENST00000620230 1361 ntTSL 5 BASIC14.85□□□□□ -0.03
TRAV8-4A0A0B4J246 TRIM58-201ENST00000366481 3225 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
TRAV8-4A0A0B4J246 ZIM2-201ENST00000593711 2083 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
TRAV8-4A0A0B4J246 HSD11B1L-217ENST00000581521 1884 ntAPPRIS P3 TSL 5 BASIC14.84□□□□□ -0.03
TRAV8-4A0A0B4J246 DUSP7-202ENST00000495880 3340 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
TRAV8-4A0A0B4J246 SLC6A17-201ENST00000331565 6427 ntAPPRIS P1 TSL 2 BASIC14.84□□□□□ -0.03
TRAV8-4A0A0B4J246 KLF16-201ENST00000250916 2890 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
TRAV8-4A0A0B4J246 SIMC1-204ENST00000430704 1925 ntAPPRIS P3 TSL 2 BASIC14.84□□□□□ -0.03
TRAV8-4A0A0B4J246 SASH1-201ENST00000367467 7711 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
TRAV8-4A0A0B4J246 C8orf82-201ENST00000313465 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
TRAV8-4A0A0B4J246 PEX7-201ENST00000318471 1464 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
TRAV8-4A0A0B4J246 DPH1-203ENST00000570477 1747 ntAPPRIS ALT2 TSL 2 BASIC14.84□□□□□ -0.03
TRAV8-4A0A0B4J246 ADAMTS10-205ENST00000595838 2458 ntTSL 2 BASIC14.84□□□□□ -0.03
TRAV8-4A0A0B4J246 CHST11-201ENST00000303694 5709 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
TRAV8-4A0A0B4J246 ANAPC13-201ENST00000354910 1209 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
TRAV8-4A0A0B4J246 SLC25A39-203ENST00000537904 1274 ntTSL 2 BASIC14.84□□□□□ -0.03
TRAV8-4A0A0B4J246 AL499627.2-201ENST00000606283 725 ntBASIC14.84□□□□□ -0.03
TRAV8-4A0A0B4J246 PICSAR-201ENST00000615826 733 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
TRAV8-4A0A0B4J246 TUBBP5-204ENST00000635438 565 ntTSL 4 BASIC14.84□□□□□ -0.03
TRAV8-4A0A0B4J246 KHDRBS2-201ENST00000281156 2332 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
TRAV8-4A0A0B4J246 MARK1-202ENST00000366918 5169 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
TRAV8-4A0A0B4J246 AC080112.2-201ENST00000578774 2094 ntTSL 4 BASIC14.84□□□□□ -0.03
TRAV8-4A0A0B4J246 ATP10A-201ENST00000356865 6680 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
TRAV8-4A0A0B4J246 CERKL-205ENST00000409440 2425 ntTSL 2 BASIC14.84□□□□□ -0.03
TRAV8-4A0A0B4J246 RNASEH2B-201ENST00000336617 1629 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
TRAV8-4A0A0B4J246 RETREG2-203ENST00000430297 4618 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
TRAV8-4A0A0B4J246 FXYD3-201ENST00000344013 1404 ntTSL 5 BASIC14.83□□□□□ -0.03
TRAV8-4A0A0B4J246 PBX4-201ENST00000251203 1724 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
TRAV8-4A0A0B4J246 FAM110D-201ENST00000374268 2858 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
TRAV8-4A0A0B4J246 GAL3ST1-202ENST00000401975 1791 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
TRAV8-4A0A0B4J246 PPT2-244ENST00000324816 2053 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.03
TRAV8-4A0A0B4J246 PNRC1-201ENST00000336032 2065 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
TRAV8-4A0A0B4J246 AC007952.6-201ENST00000573168 2673 ntBASIC14.83□□□□□ -0.03
TRAV8-4A0A0B4J246 AC003957.1-201ENST00000625108 2673 ntBASIC14.83□□□□□ -0.03
TRAV8-4A0A0B4J246 CACNA1A-215ENST00000635727 7536 ntAPPRIS ALT2 TSL 5 BASIC14.83□□□□□ -0.04
TRAV8-4A0A0B4J246 LYSMD4-210ENST00000545021 2431 ntTSL 4 BASIC14.83□□□□□ -0.04
TRAV8-4A0A0B4J246 SLC19A1-209ENST00000485649 1896 ntAPPRIS ALT2 TSL 2 BASIC14.83□□□□□ -0.04
TRAV8-4A0A0B4J246 LTBP4-201ENST00000204005 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
TRAV8-4A0A0B4J246 TMED4-201ENST00000289577 2203 ntTSL 2 BASIC14.83□□□□□ -0.04
TRAV8-4A0A0B4J246 MEIS1-AS3-201ENST00000454167 707 ntTSL 4 BASIC14.83□□□□□ -0.04
TRAV8-4A0A0B4J246 ERRFI1-204ENST00000474874 479 ntTSL 3 BASIC14.83□□□□□ -0.04
TRAV8-4A0A0B4J246 UQCR11-202ENST00000589880 504 ntAPPRIS P1 TSL 3 BASIC14.83□□□□□ -0.04
TRAV8-4A0A0B4J246 CFD-202ENST00000592860 809 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
TRAV8-4A0A0B4J246 ILDR2-205ENST00000526687 2299 ntTSL 5 BASIC14.83□□□□□ -0.04
TRAV8-4A0A0B4J246 PALM-208ENST00000592155 2272 ntTSL 4 BASIC14.83□□□□□ -0.04
TRAV8-4A0A0B4J246 H2AFY2-201ENST00000373255 1980 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
TRAV8-4A0A0B4J246 PPP1R12B-202ENST00000356764 1687 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
TRAV8-4A0A0B4J246 AZIN1-201ENST00000337198 4721 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
TRAV8-4A0A0B4J246 EPHA6-202ENST00000470610 2058 ntTSL 2 BASIC14.83□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 25.2 ms