Protein–RNA interactions for Protein: A0A0B4J234

TRAV2, T-cell receptor alpha variable 2 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV2A0A0B4J234 FGFR1-238ENST00000532791 5590 ntAPPRIS ALT1 TSL 5 BASIC16.11■□□□□ 0.17
TRAV2A0A0B4J234 TMEM235-205ENST00000586400 2272 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
TRAV2A0A0B4J234 BICRA-204ENST00000614245 5697 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
TRAV2A0A0B4J234 AOC3-207ENST00000617500 2392 ntTSL 4 BASIC16.11■□□□□ 0.17
TRAV2A0A0B4J234 POMZP3-202ENST00000310842 1490 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
TRAV2A0A0B4J234 BICDL2-201ENST00000389347 1811 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
TRAV2A0A0B4J234 AUTS2-201ENST00000342771 6173 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
TRAV2A0A0B4J234 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
TRAV2A0A0B4J234 SOX18-201ENST00000340356 1864 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
TRAV2A0A0B4J234 LHFPL3-202ENST00000424859 1852 ntAPPRIS P5 TSL 1 (best) BASIC16.1■□□□□ 0.17
TRAV2A0A0B4J234 RASGRP2-207ENST00000377497 2221 ntAPPRIS P2 TSL 1 (best) BASIC16.1■□□□□ 0.17
TRAV2A0A0B4J234 PNMA6A-201ENST00000421798 2209 ntAPPRIS P1 TSL 2 BASIC16.1■□□□□ 0.17
TRAV2A0A0B4J234 C2orf72-201ENST00000373640 3657 ntAPPRIS P1 TSL 2 BASIC16.1■□□□□ 0.17
TRAV2A0A0B4J234 EFCAB1-202ENST00000433756 2286 ntTSL 2 BASIC16.1■□□□□ 0.17
TRAV2A0A0B4J234 ODC1-201ENST00000234111 2653 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
TRAV2A0A0B4J234 IDI1-201ENST00000381344 2301 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
TRAV2A0A0B4J234 SCN1B-206ENST00000638536 1600 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
TRAV2A0A0B4J234 MRPL46-201ENST00000312475 1019 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
TRAV2A0A0B4J234 AC092675.2-201ENST00000413274 541 ntTSL 4 BASIC16.1■□□□□ 0.17
TRAV2A0A0B4J234 CDKN2A-210ENST00000530628 748 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
TRAV2A0A0B4J234 RHOF-204ENST00000537265 699 ntTSL 2 BASIC16.1■□□□□ 0.17
TRAV2A0A0B4J234 ELL3-201ENST00000319359 2352 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
TRAV2A0A0B4J234 PGF-201ENST00000238607 1693 ntAPPRIS ALT2 TSL 3 BASIC16.1■□□□□ 0.17
TRAV2A0A0B4J234 ARL2BP-201ENST00000219204 2130 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
TRAV2A0A0B4J234 FASTK-212ENST00000482571 1764 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
TRAV2A0A0B4J234 PFKFB3-216ENST00000625260 1752 ntAPPRIS ALT1 TSL 5 BASIC16.1■□□□□ 0.17
TRAV2A0A0B4J234 NBL1-202ENST00000375136 2172 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
TRAV2A0A0B4J234 MYCN-201ENST00000281043 2602 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
TRAV2A0A0B4J234 EEFSEC-201ENST00000254730 2232 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
TRAV2A0A0B4J234 CAPG-201ENST00000263867 1442 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
TRAV2A0A0B4J234 NABP2-202ENST00000341463 1411 ntAPPRIS P1 TSL 3 BASIC16.1■□□□□ 0.17
TRAV2A0A0B4J234 PRR7-201ENST00000323249 1480 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
TRAV2A0A0B4J234 NARF-202ENST00000345415 1487 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
TRAV2A0A0B4J234 ZNF568-208ENST00000586353 1902 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
TRAV2A0A0B4J234 BX005040.4-201ENST00000637145 1518 ntBASIC16.09■□□□□ 0.17
TRAV2A0A0B4J234 PHF10-202ENST00000366780 1589 ntAPPRIS ALT2 TSL 5 BASIC16.09■□□□□ 0.17
TRAV2A0A0B4J234 MARK2-204ENST00000402010 4728 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
TRAV2A0A0B4J234 FOSL1-201ENST00000312562 1669 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
TRAV2A0A0B4J234 ANKRD53-204ENST00000457410 1671 ntTSL 5 BASIC16.09■□□□□ 0.17
TRAV2A0A0B4J234 CHRAC1-203ENST00000519533 1678 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
TRAV2A0A0B4J234 KCTD13-202ENST00000561540 1773 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
TRAV2A0A0B4J234 KRTAP17-1-201ENST00000334202 779 ntAPPRIS P1 BASIC16.09■□□□□ 0.17
TRAV2A0A0B4J234 FAM66D-201ENST00000434078 918 ntTSL 5 BASIC16.09■□□□□ 0.17
TRAV2A0A0B4J234 AL590128.2-201ENST00000442889 415 ntTSL 3 BASIC16.09■□□□□ 0.17
TRAV2A0A0B4J234 PRKCQ-AS1-204ENST00000455810 920 ntTSL 2 BASIC16.09■□□□□ 0.17
TRAV2A0A0B4J234 AC006538.2-201ENST00000586572 543 ntAPPRIS P1 TSL 4 BASIC16.09■□□□□ 0.17
TRAV2A0A0B4J234 C11orf96-202ENST00000528572 1834 ntBASIC16.09■□□□□ 0.17
TRAV2A0A0B4J234 MTCH2-201ENST00000302503 2587 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
TRAV2A0A0B4J234 MAPK8IP1P2-201ENST00000580257 1472 ntBASIC16.09■□□□□ 0.17
TRAV2A0A0B4J234 SLC25A29-202ENST00000392908 2242 ntTSL 2 BASIC16.09■□□□□ 0.17
TRAV2A0A0B4J234 ARL13B-205ENST00000471138 2206 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
TRAV2A0A0B4J234 TPM1-204ENST00000334895 1637 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
TRAV2A0A0B4J234 GMDS-202ENST00000380815 1752 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.17
TRAV2A0A0B4J234 FAM129C-211ENST00000600871 1822 ntAPPRIS ALT2 TSL 5 BASIC16.08■□□□□ 0.17
TRAV2A0A0B4J234 HNRNPM-202ENST00000348943 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.17
TRAV2A0A0B4J234 B4GALNT1-202ENST00000418555 1861 ntTSL 2 BASIC16.08■□□□□ 0.17
TRAV2A0A0B4J234 AC025164.2-201ENST00000501008 1898 ntTSL 5 BASIC16.08■□□□□ 0.17
TRAV2A0A0B4J234 SLC35A3-205ENST00000465289 5696 ntAPPRIS P1 TSL 5 BASIC16.08■□□□□ 0.17
TRAV2A0A0B4J234 ZGPAT-201ENST00000328969 1945 ntTSL 2 BASIC16.08■□□□□ 0.16
TRAV2A0A0B4J234 IKBKG-212ENST00000617207 1949 ntAPPRIS ALT1 TSL 3 BASIC16.08■□□□□ 0.16
TRAV2A0A0B4J234 TANGO2-202ENST00000398042 2011 ntTSL 2 BASIC16.08■□□□□ 0.16
TRAV2A0A0B4J234 REPIN1-214ENST00000489432 2058 ntAPPRIS ALT2 TSL 2 BASIC16.08■□□□□ 0.16
TRAV2A0A0B4J234 NME4-201ENST00000219479 995 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
TRAV2A0A0B4J234 HBM-201ENST00000356815 506 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
TRAV2A0A0B4J234 NME4-202ENST00000382940 766 ntTSL 3 BASIC16.08■□□□□ 0.16
TRAV2A0A0B4J234 TSPY4-201ENST00000383008 1143 ntAPPRIS ALT2 TSL 5 BASIC16.08■□□□□ 0.16
TRAV2A0A0B4J234 ORMDL1-202ENST00000392349 1137 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
TRAV2A0A0B4J234 ITGA9-AS1-210ENST00000457661 738 ntTSL 4 BASIC16.08■□□□□ 0.16
TRAV2A0A0B4J234 AC005775.1-201ENST00000592413 850 ntTSL 5 BASIC16.08■□□□□ 0.16
TRAV2A0A0B4J234 MRM1-203ENST00000612760 1284 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
TRAV2A0A0B4J234 NME4-211ENST00000620944 1193 ntTSL 2 BASIC16.08■□□□□ 0.16
TRAV2A0A0B4J234 CDIPT-210ENST00000570016 1346 ntAPPRIS P1 TSL 5 BASIC16.08■□□□□ 0.16
TRAV2A0A0B4J234 RIMBP3C-202ENST00000433039 5784 ntAPPRIS P2 BASIC16.08■□□□□ 0.16
TRAV2A0A0B4J234 TMEM259-201ENST00000333175 2581 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.16
TRAV2A0A0B4J234 IL15RA-206ENST00000397248 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
TRAV2A0A0B4J234 RHBDD2-201ENST00000006777 1802 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
TRAV2A0A0B4J234 ALDH6A1-201ENST00000350259 1869 ntAPPRIS ALT2 TSL 2 BASIC16.08■□□□□ 0.16
TRAV2A0A0B4J234 TMEM5-201ENST00000261234 1918 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
TRAV2A0A0B4J234 SLC26A5-209ENST00000393735 1947 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
TRAV2A0A0B4J234 PLK5-202ENST00000454744 1930 ntAPPRIS P2 TSL 2 BASIC16.07■□□□□ 0.16
TRAV2A0A0B4J234 CXCL14-201ENST00000337225 1971 ntAPPRIS P2 TSL 1 (best) BASIC16.07■□□□□ 0.16
TRAV2A0A0B4J234 TRABD2A-203ENST00000409520 1975 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
TRAV2A0A0B4J234 AC133065.2-201ENST00000573379 2147 ntTSL 2 BASIC16.07■□□□□ 0.16
TRAV2A0A0B4J234 EGR4-202ENST00000545030 2372 ntAPPRIS P2 TSL 1 (best) BASIC16.07■□□□□ 0.16
TRAV2A0A0B4J234 CRB2-202ENST00000373631 5550 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
TRAV2A0A0B4J234 AK1-201ENST00000223836 736 ntTSL 3 BASIC16.07■□□□□ 0.16
TRAV2A0A0B4J234 GLTPD2-201ENST00000331264 1023 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
TRAV2A0A0B4J234 CROT-202ENST00000412227 1213 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
TRAV2A0A0B4J234 C12orf43-208ENST00000539736 1033 ntAPPRIS ALT2 TSL 2 BASIC16.07■□□□□ 0.16
TRAV2A0A0B4J234 PTGDR-202ENST00000553372 1216 ntTSL 3 BASIC16.07■□□□□ 0.16
TRAV2A0A0B4J234 PRSS22-203ENST00000571228 1037 ntTSL 2 BASIC16.07■□□□□ 0.16
TRAV2A0A0B4J234 AC010999.2-201ENST00000621974 596 ntTSL 2 BASIC16.07■□□□□ 0.16
TRAV2A0A0B4J234 MTX2-201ENST00000249442 1364 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
TRAV2A0A0B4J234 PSMD7-201ENST00000219313 1670 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
TRAV2A0A0B4J234 ZFAND6-224ENST00000618205 1659 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
TRAV2A0A0B4J234 PHLDB2-210ENST00000478922 1861 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
TRAV2A0A0B4J234 SLC22A31-201ENST00000562855 1909 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
TRAV2A0A0B4J234 CREG1-201ENST00000370509 1974 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
TRAV2A0A0B4J234 UBTF-213ENST00000533177 3011 ntTSL 5 BASIC16.07■□□□□ 0.16
TRAV2A0A0B4J234 EP300-201ENST00000263253 9587 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 22.7 ms