Protein–RNA interactions for Protein: A0A0A6YYJ0

MSANTD3-TMEFF1, Protein MSANTD3-TMEFF1, humanhuman

Predictions only

Length 341 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MSANTD3-TMEFF1A0A0A6YYJ0 MMP23B-202ENST00000378675 1309 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
MSANTD3-TMEFF1A0A0A6YYJ0 BCAT2-208ENST00000598162 1329 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
MSANTD3-TMEFF1A0A0A6YYJ0 AC083805.3-201ENST00000619560 1315 ntTSL 3 BASIC21.19■□□□□ 0.98
MSANTD3-TMEFF1A0A0A6YYJ0 CACNB1-201ENST00000344140 1889 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
MSANTD3-TMEFF1A0A0A6YYJ0 PRSS29P-202ENST00000568091 1864 ntTSL 5 BASIC21.19■□□□□ 0.98
MSANTD3-TMEFF1A0A0A6YYJ0 HADH-201ENST00000309522 1912 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
MSANTD3-TMEFF1A0A0A6YYJ0 RCC2-201ENST00000375433 2030 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
MSANTD3-TMEFF1A0A0A6YYJ0 TUSC3-203ENST00000503731 1498 ntAPPRIS P4 TSL 1 (best) BASIC21.19■□□□□ 0.98
MSANTD3-TMEFF1A0A0A6YYJ0 MAP6D1-201ENST00000318631 2111 ntAPPRIS P2 TSL 1 (best) BASIC21.18■□□□□ 0.98
MSANTD3-TMEFF1A0A0A6YYJ0 CALM1-202ENST00000447653 1104 ntAPPRIS ALT1 TSL 2 BASIC21.18■□□□□ 0.98
MSANTD3-TMEFF1A0A0A6YYJ0 TPT1-AS1-210ENST00000520590 873 ntTSL 5 BASIC21.18■□□□□ 0.98
MSANTD3-TMEFF1A0A0A6YYJ0 OVCH1-AS1-203ENST00000551108 963 ntTSL 2 BASIC21.18■□□□□ 0.98
MSANTD3-TMEFF1A0A0A6YYJ0 SEC23A-213ENST00000557280 561 ntTSL 4 BASIC21.18■□□□□ 0.98
MSANTD3-TMEFF1A0A0A6YYJ0 AC106738.2-202ENST00000558156 533 ntTSL 4 BASIC21.18■□□□□ 0.98
MSANTD3-TMEFF1A0A0A6YYJ0 FAM219B-212ENST00000565772 1249 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
MSANTD3-TMEFF1A0A0A6YYJ0 KCNH6-203ENST00000580652 1703 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
MSANTD3-TMEFF1A0A0A6YYJ0 SRPK3-203ENST00000370104 1753 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
MSANTD3-TMEFF1A0A0A6YYJ0 MEA1-201ENST00000244711 1089 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
MSANTD3-TMEFF1A0A0A6YYJ0 PRDX1-201ENST00000262746 1234 ntAPPRIS P1 TSL 5 BASIC21.17■□□□□ 0.98
MSANTD3-TMEFF1A0A0A6YYJ0 LIPT2-201ENST00000310109 1018 ntAPPRIS P1 TSL 2 BASIC21.17■□□□□ 0.98
MSANTD3-TMEFF1A0A0A6YYJ0 SERF1A-201ENST00000317633 963 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
MSANTD3-TMEFF1A0A0A6YYJ0 RAC1-202ENST00000356142 907 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
MSANTD3-TMEFF1A0A0A6YYJ0 AL512625.2-201ENST00000417533 625 ntBASIC21.17■□□□□ 0.98
MSANTD3-TMEFF1A0A0A6YYJ0 EP300-AS1-201ENST00000420537 457 ntTSL 3 BASIC21.17■□□□□ 0.98
MSANTD3-TMEFF1A0A0A6YYJ0 RPS2P52-201ENST00000469610 820 ntBASIC21.17■□□□□ 0.98
MSANTD3-TMEFF1A0A0A6YYJ0 RARRES2P4-201ENST00000514074 484 ntBASIC21.17■□□□□ 0.98
MSANTD3-TMEFF1A0A0A6YYJ0 DHRS4L2-204ENST00000537912 918 ntTSL 2 BASIC21.17■□□□□ 0.98
MSANTD3-TMEFF1A0A0A6YYJ0 AK4-208ENST00000546702 1335 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
MSANTD3-TMEFF1A0A0A6YYJ0 SPR-201ENST00000234454 1480 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
MSANTD3-TMEFF1A0A0A6YYJ0 CDCA4-202ENST00000392590 1536 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
MSANTD3-TMEFF1A0A0A6YYJ0 SERTAD3-201ENST00000322354 1734 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
MSANTD3-TMEFF1A0A0A6YYJ0 EGR4-201ENST00000436467 2377 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
MSANTD3-TMEFF1A0A0A6YYJ0 CBWD3-202ENST00000377342 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
MSANTD3-TMEFF1A0A0A6YYJ0 MFSD3-201ENST00000301327 1548 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
MSANTD3-TMEFF1A0A0A6YYJ0 TMEM44-211ENST00000473092 1508 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
MSANTD3-TMEFF1A0A0A6YYJ0 TPD52L1-203ENST00000368402 1308 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
MSANTD3-TMEFF1A0A0A6YYJ0 TMEM176B-203ENST00000434545 1303 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
MSANTD3-TMEFF1A0A0A6YYJ0 AKAIN1-201ENST00000434239 575 ntAPPRIS P1 TSL 2 BASIC21.16■□□□□ 0.98
MSANTD3-TMEFF1A0A0A6YYJ0 PTGER2-202ENST00000557436 643 ntTSL 3 BASIC21.16■□□□□ 0.98
MSANTD3-TMEFF1A0A0A6YYJ0 PTMS-207ENST00000619580 1150 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
MSANTD3-TMEFF1A0A0A6YYJ0 AC120498.10-201ENST00000621827 505 ntBASIC21.16■□□□□ 0.98
MSANTD3-TMEFF1A0A0A6YYJ0 ADD3-AS1-204ENST00000627565 388 ntTSL 3 BASIC21.16■□□□□ 0.98
MSANTD3-TMEFF1A0A0A6YYJ0 TGFBRAP1-202ENST00000393359 5979 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
MSANTD3-TMEFF1A0A0A6YYJ0 ZC3H14-202ENST00000302216 2560 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
MSANTD3-TMEFF1A0A0A6YYJ0 CACTIN-AS1-201ENST00000592274 1913 ntTSL 2 BASIC21.16■□□□□ 0.98
MSANTD3-TMEFF1A0A0A6YYJ0 TNIP2-203ENST00000503235 1653 ntTSL 3 BASIC21.15■□□□□ 0.98
MSANTD3-TMEFF1A0A0A6YYJ0 FHL3-201ENST00000373016 1647 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
MSANTD3-TMEFF1A0A0A6YYJ0 AKR7A2-201ENST00000235835 1362 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
MSANTD3-TMEFF1A0A0A6YYJ0 GPS2-201ENST00000380728 1379 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
MSANTD3-TMEFF1A0A0A6YYJ0 C16orf74-201ENST00000284245 906 ntAPPRIS P2 TSL 1 (best) BASIC21.15■□□□□ 0.98
MSANTD3-TMEFF1A0A0A6YYJ0 LGALS7-201ENST00000378626 466 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
MSANTD3-TMEFF1A0A0A6YYJ0 ATPIF1-203ENST00000468425 539 ntTSL 2 BASIC21.15■□□□□ 0.98
MSANTD3-TMEFF1A0A0A6YYJ0 C5orf58-204ENST00000521850 2113 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
MSANTD3-TMEFF1A0A0A6YYJ0 Z97653.1-201ENST00000567096 446 ntTSL 3 BASIC21.15■□□□□ 0.98
MSANTD3-TMEFF1A0A0A6YYJ0 SNX18-201ENST00000326277 2063 ntTSL 2 BASIC21.15■□□□□ 0.98
MSANTD3-TMEFF1A0A0A6YYJ0 PTP4A3-203ENST00000520105 1866 ntTSL 5 BASIC21.15■□□□□ 0.98
MSANTD3-TMEFF1A0A0A6YYJ0 MEIOB-202ENST00000397344 1792 ntTSL 5 BASIC21.15■□□□□ 0.98
MSANTD3-TMEFF1A0A0A6YYJ0 R3HDM4-203ENST00000587975 1765 ntTSL 3 BASIC21.15■□□□□ 0.98
MSANTD3-TMEFF1A0A0A6YYJ0 DHRS2-202ENST00000344777 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
MSANTD3-TMEFF1A0A0A6YYJ0 CLN3-240ENST00000631023 1586 ntTSL 5 BASIC21.14■□□□□ 0.98
MSANTD3-TMEFF1A0A0A6YYJ0 TLE6-201ENST00000246112 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.98
MSANTD3-TMEFF1A0A0A6YYJ0 POLDIP2-201ENST00000540200 2121 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
MSANTD3-TMEFF1A0A0A6YYJ0 GNB2-201ENST00000303210 1878 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
MSANTD3-TMEFF1A0A0A6YYJ0 RNPS1-201ENST00000301730 1276 ntAPPRIS P1 TSL 2 BASIC21.14■□□□□ 0.97
MSANTD3-TMEFF1A0A0A6YYJ0 LINC01191-201ENST00000412690 844 ntTSL 2 BASIC21.14■□□□□ 0.97
MSANTD3-TMEFF1A0A0A6YYJ0 ASMTL-AS1-203ENST00000425740 840 ntTSL 2 BASIC21.14■□□□□ 0.97
MSANTD3-TMEFF1A0A0A6YYJ0 CRIP2-202ENST00000483017 1176 ntTSL 2 BASIC21.14■□□□□ 0.97
MSANTD3-TMEFF1A0A0A6YYJ0 DNAJA4-210ENST00000489435 947 ntTSL 3 BASIC21.14■□□□□ 0.97
MSANTD3-TMEFF1A0A0A6YYJ0 AC003102.1-201ENST00000588279 569 ntTSL 4 BASIC21.14■□□□□ 0.97
MSANTD3-TMEFF1A0A0A6YYJ0 AC005786.3-201ENST00000589360 565 ntTSL 3 BASIC21.14■□□□□ 0.97
MSANTD3-TMEFF1A0A0A6YYJ0 AC083880.1-201ENST00000608266 535 ntBASIC21.14■□□□□ 0.97
MSANTD3-TMEFF1A0A0A6YYJ0 SMOX-202ENST00000305958 2233 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
MSANTD3-TMEFF1A0A0A6YYJ0 SYT6-209ENST00000610222 1707 ntAPPRIS P1 TSL 5 BASIC21.14■□□□□ 0.97
MSANTD3-TMEFF1A0A0A6YYJ0 NAGS-201ENST00000293404 2182 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
MSANTD3-TMEFF1A0A0A6YYJ0 CTSF-201ENST00000310325 2035 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
MSANTD3-TMEFF1A0A0A6YYJ0 HAUS4-203ENST00000347758 1428 ntTSL 2 BASIC21.13■□□□□ 0.97
MSANTD3-TMEFF1A0A0A6YYJ0 PPP2R2D-201ENST00000455566 5738 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
MSANTD3-TMEFF1A0A0A6YYJ0 GGA2-211ENST00000567468 1713 ntTSL 2 BASIC21.13■□□□□ 0.97
MSANTD3-TMEFF1A0A0A6YYJ0 FAM124A-204ENST00000615498 2383 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
MSANTD3-TMEFF1A0A0A6YYJ0 TTC9B-201ENST00000311308 843 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
MSANTD3-TMEFF1A0A0A6YYJ0 NAA20-202ENST00000334982 1260 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
MSANTD3-TMEFF1A0A0A6YYJ0 CBY3-201ENST00000376974 785 ntAPPRIS P1 TSL 2 BASIC21.13■□□□□ 0.97
MSANTD3-TMEFF1A0A0A6YYJ0 FDX2-202ENST00000393708 1012 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
MSANTD3-TMEFF1A0A0A6YYJ0 DUSP5P2-201ENST00000426873 1033 ntBASIC21.13■□□□□ 0.97
MSANTD3-TMEFF1A0A0A6YYJ0 AC097658.1-201ENST00000475555 843 ntBASIC21.13■□□□□ 0.97
MSANTD3-TMEFF1A0A0A6YYJ0 TMEM9-209ENST00000485839 938 ntAPPRIS P3 TSL 2 BASIC21.13■□□□□ 0.97
MSANTD3-TMEFF1A0A0A6YYJ0 AC105001.1-201ENST00000506149 821 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
MSANTD3-TMEFF1A0A0A6YYJ0 AC008175.2-201ENST00000612840 297 ntBASIC21.13■□□□□ 0.97
MSANTD3-TMEFF1A0A0A6YYJ0 CNTFR-201ENST00000351266 1910 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
MSANTD3-TMEFF1A0A0A6YYJ0 FAM21EP-202ENST00000456967 2177 ntTSL 2 BASIC21.13■□□□□ 0.97
MSANTD3-TMEFF1A0A0A6YYJ0 RAB28-201ENST00000288723 1810 ntAPPRIS P3 TSL 1 (best) BASIC21.13■□□□□ 0.97
MSANTD3-TMEFF1A0A0A6YYJ0 RHOQ-201ENST00000238738 2975 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
MSANTD3-TMEFF1A0A0A6YYJ0 SMAD1-201ENST00000302085 1966 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
MSANTD3-TMEFF1A0A0A6YYJ0 NKIRAS2-206ENST00000393885 1909 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
MSANTD3-TMEFF1A0A0A6YYJ0 NEU4-204ENST00000405370 1907 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
MSANTD3-TMEFF1A0A0A6YYJ0 ASIP-201ENST00000374954 586 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
MSANTD3-TMEFF1A0A0A6YYJ0 ESRRAP1-201ENST00000400596 1257 ntBASIC21.12■□□□□ 0.97
MSANTD3-TMEFF1A0A0A6YYJ0 RHEB-204ENST00000472642 900 ntTSL 3 BASIC21.12■□□□□ 0.97
MSANTD3-TMEFF1A0A0A6YYJ0 UNC93B6-201ENST00000525262 1143 ntTSL 5 BASIC21.12■□□□□ 0.97
MSANTD3-TMEFF1A0A0A6YYJ0 FAM32A-205ENST00000589852 1168 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 22.9 ms