Protein–RNA interactions for Protein: A0A087WSZ9

TRAV30, T-cell receptor alpha variable 30 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV30A0A087WSZ9 IL15RA-216ENST00000530685 660 ntTSL 5 BASIC16.73■□□□□ 0.27
TRAV30A0A087WSZ9 AC011298.3-201ENST00000615796 283 ntBASIC16.73■□□□□ 0.27
TRAV30A0A087WSZ9 CTU2-202ENST00000453996 1751 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
TRAV30A0A087WSZ9 XBP1-207ENST00000611155 1794 ntTSL 5 BASIC16.73■□□□□ 0.27
TRAV30A0A087WSZ9 GRK4-201ENST00000345167 2013 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
TRAV30A0A087WSZ9 RBBP7-202ENST00000380084 2036 ntTSL 2 BASIC16.73■□□□□ 0.27
TRAV30A0A087WSZ9 PHACTR3-202ENST00000359926 2252 ntTSL 2 BASIC16.73■□□□□ 0.27
TRAV30A0A087WSZ9 P2RY2-203ENST00000393597 2107 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
TRAV30A0A087WSZ9 NARF-202ENST00000345415 1487 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
TRAV30A0A087WSZ9 GPR27-201ENST00000304411 2447 ntAPPRIS P1 BASIC16.72■□□□□ 0.27
TRAV30A0A087WSZ9 FASTK-212ENST00000482571 1764 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
TRAV30A0A087WSZ9 ST7L-221ENST00000490067 1780 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
TRAV30A0A087WSZ9 AC007375.3-201ENST00000600936 2314 ntBASIC16.72■□□□□ 0.27
TRAV30A0A087WSZ9 ZNF669-201ENST00000343381 1951 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
TRAV30A0A087WSZ9 WTAP-201ENST00000337387 1622 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
TRAV30A0A087WSZ9 CPEB1-218ENST00000620182 2422 ntTSL 2 BASIC16.72■□□□□ 0.27
TRAV30A0A087WSZ9 JAKMIP1-201ENST00000282924 2585 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
TRAV30A0A087WSZ9 FBXO27-202ENST00000509137 2130 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
TRAV30A0A087WSZ9 AC009126.1-201ENST00000501338 2245 ntTSL 2 BASIC16.72■□□□□ 0.27
TRAV30A0A087WSZ9 CCDC130-201ENST00000221554 1792 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
TRAV30A0A087WSZ9 SBK1-201ENST00000341901 4992 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
TRAV30A0A087WSZ9 YAP1-201ENST00000282441 5386 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
TRAV30A0A087WSZ9 HMGA2-205ENST00000425208 1444 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
TRAV30A0A087WSZ9 MXRA8-201ENST00000309212 2273 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
TRAV30A0A087WSZ9 B4GALT5-201ENST00000371711 4722 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
TRAV30A0A087WSZ9 PDK3-201ENST00000379162 1809 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
TRAV30A0A087WSZ9 ZXDC-201ENST00000336332 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
TRAV30A0A087WSZ9 COL8A2-203ENST00000481785 2036 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
TRAV30A0A087WSZ9 C4orf36-201ENST00000295898 881 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
TRAV30A0A087WSZ9 DNAJC4-202ENST00000321685 1288 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
TRAV30A0A087WSZ9 NAXE-201ENST00000368233 1012 ntTSL 2 BASIC16.71■□□□□ 0.27
TRAV30A0A087WSZ9 TMEM80-201ENST00000397510 1094 ntAPPRIS P2 TSL 5 BASIC16.71■□□□□ 0.27
TRAV30A0A087WSZ9 AP005435.1-201ENST00000529293 1178 ntBASIC16.71■□□□□ 0.27
TRAV30A0A087WSZ9 TMC6-218ENST00000591436 1155 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
TRAV30A0A087WSZ9 HOXA11-AS1_1.1-201ENST00000613939 98 ntBASIC16.71■□□□□ 0.27
TRAV30A0A087WSZ9 AC136469.2-201ENST00000623944 1028 ntBASIC16.71■□□□□ 0.27
TRAV30A0A087WSZ9 DNAJC4-212ENST00000628077 938 ntTSL 5 BASIC16.71■□□□□ 0.27
TRAV30A0A087WSZ9 ZMAT3-203ENST00000432729 2944 ntAPPRIS ALT1 TSL 2 BASIC16.71■□□□□ 0.27
TRAV30A0A087WSZ9 PMPCA-201ENST00000371717 2174 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
TRAV30A0A087WSZ9 C12orf75-208ENST00000612117 1329 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
TRAV30A0A087WSZ9 RNF166-202ENST00000537718 1525 ntTSL 2 BASIC16.7■□□□□ 0.26
TRAV30A0A087WSZ9 ATG4D-201ENST00000309469 1949 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
TRAV30A0A087WSZ9 NAGPA-202ENST00000381955 2100 ntTSL 5 BASIC16.7■□□□□ 0.26
TRAV30A0A087WSZ9 ILDR2-204ENST00000525740 2242 ntTSL 5 BASIC16.7■□□□□ 0.26
TRAV30A0A087WSZ9 PMS1-222ENST00000639501 2506 ntTSL 5 BASIC16.7■□□□□ 0.26
TRAV30A0A087WSZ9 SHB-201ENST00000377707 2783 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
TRAV30A0A087WSZ9 ARRB2-201ENST00000269260 1895 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
TRAV30A0A087WSZ9 PRSS33-202ENST00000570702 1676 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
TRAV30A0A087WSZ9 SGMS1-210ENST00000619438 1680 ntTSL 5 BASIC16.7■□□□□ 0.26
TRAV30A0A087WSZ9 MFSD7-209ENST00000515118 1556 ntTSL 5 BASIC16.7■□□□□ 0.26
TRAV30A0A087WSZ9 TSKS-202ENST00000358830 1367 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
TRAV30A0A087WSZ9 MOSPD3-204ENST00000424091 1115 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
TRAV30A0A087WSZ9 SENCR-201ENST00000526269 1298 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
TRAV30A0A087WSZ9 Z97653.1-201ENST00000567096 446 ntTSL 3 BASIC16.7■□□□□ 0.26
TRAV30A0A087WSZ9 MIR663AHG-233ENST00000609248 830 ntTSL 5 BASIC16.7■□□□□ 0.26
TRAV30A0A087WSZ9 WNT10A-201ENST00000258411 2547 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
TRAV30A0A087WSZ9 TANGO2-202ENST00000398042 2011 ntTSL 2 BASIC16.7■□□□□ 0.26
TRAV30A0A087WSZ9 SLC4A4-201ENST00000264485 5852 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
TRAV30A0A087WSZ9 SLC35A3-205ENST00000465289 5696 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
TRAV30A0A087WSZ9 GPR162-201ENST00000311268 2768 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
TRAV30A0A087WSZ9 ANAPC4-201ENST00000315368 2685 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
TRAV30A0A087WSZ9 AC243965.2-201ENST00000612576 2671 ntTSL 5 BASIC16.7■□□□□ 0.26
TRAV30A0A087WSZ9 KCNK15-201ENST00000372861 2599 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
TRAV30A0A087WSZ9 SUMF1-202ENST00000383843 1447 ntTSL 2 BASIC16.7■□□□□ 0.26
TRAV30A0A087WSZ9 ZIM2-201ENST00000593711 2083 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
TRAV30A0A087WSZ9 GPR157-201ENST00000377411 5265 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
TRAV30A0A087WSZ9 CPNE2-201ENST00000290776 2645 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
TRAV30A0A087WSZ9 NSUN2-206ENST00000506139 2619 ntAPPRIS ALT2 TSL 2 BASIC16.69■□□□□ 0.26
TRAV30A0A087WSZ9 ADAP2-204ENST00000580525 1598 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
TRAV30A0A087WSZ9 SH2B2-202ENST00000536178 2113 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
TRAV30A0A087WSZ9 TEX22-201ENST00000451127 2571 ntAPPRIS P1 TSL 2 BASIC16.69■□□□□ 0.26
TRAV30A0A087WSZ9 AC084757.3-201ENST00000558061 1943 ntTSL 3 BASIC16.69■□□□□ 0.26
TRAV30A0A087WSZ9 U2AF1-202ENST00000380276 940 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
TRAV30A0A087WSZ9 SERBP1P1-201ENST00000396021 1160 ntBASIC16.69■□□□□ 0.26
TRAV30A0A087WSZ9 RAB6A-204ENST00000536566 1267 ntTSL 5 BASIC16.69■□□□□ 0.26
TRAV30A0A087WSZ9 ZNF264-206ENST00000600531 774 ntTSL 2 BASIC16.69■□□□□ 0.26
TRAV30A0A087WSZ9 PRR16-202ENST00000407149 1747 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
TRAV30A0A087WSZ9 DOCK5-208ENST00000481100 2166 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
TRAV30A0A087WSZ9 PON1-201ENST00000222381 2568 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
TRAV30A0A087WSZ9 ACAA1-202ENST00000333167 1785 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
TRAV30A0A087WSZ9 CITED2-202ENST00000536159 1797 ntAPPRIS P1 TSL 3 BASIC16.69■□□□□ 0.26
TRAV30A0A087WSZ9 CITED2-203ENST00000537332 1780 ntTSL 3 BASIC16.69■□□□□ 0.26
TRAV30A0A087WSZ9 PALM-202ENST00000338448 2725 ntAPPRIS P4 TSL 1 (best) BASIC16.69■□□□□ 0.26
TRAV30A0A087WSZ9 HLA-C-203ENST00000383329 1554 ntAPPRIS ALT2 BASIC16.68■□□□□ 0.26
TRAV30A0A087WSZ9 DOK3-202ENST00000357198 1729 ntTSL 2 BASIC16.68■□□□□ 0.26
TRAV30A0A087WSZ9 SELENOO-201ENST00000380903 2315 ntAPPRIS P2 TSL 1 (best) BASIC16.68■□□□□ 0.26
TRAV30A0A087WSZ9 SELENOO-203ENST00000611222 2311 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
TRAV30A0A087WSZ9 NFS1-204ENST00000397425 1956 ntTSL 5 BASIC16.68■□□□□ 0.26
TRAV30A0A087WSZ9 PABPC1L2A-201ENST00000373519 2237 ntAPPRIS P1 BASIC16.68■□□□□ 0.26
TRAV30A0A087WSZ9 KRTAP5-4-201ENST00000399682 1181 ntAPPRIS P5 BASIC16.68■□□□□ 0.26
TRAV30A0A087WSZ9 ERGIC1-206ENST00000519860 1000 ntTSL 3 BASIC16.68■□□□□ 0.26
TRAV30A0A087WSZ9 TRIR-202ENST00000588213 841 ntTSL 3 BASIC16.68■□□□□ 0.26
TRAV30A0A087WSZ9 SHISA9-205ENST00000639941 1135 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
TRAV30A0A087WSZ9 HMBS-201ENST00000278715 1501 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
TRAV30A0A087WSZ9 DLGAP4-204ENST00000373913 5056 ntAPPRIS P4 TSL 1 (best) BASIC16.68■□□□□ 0.26
TRAV30A0A087WSZ9 CRB2-202ENST00000373631 5550 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
TRAV30A0A087WSZ9 RMND5A-201ENST00000283632 6301 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
TRAV30A0A087WSZ9 SOX4-201ENST00000244745 5852 ntAPPRIS P1 BASIC16.68■□□□□ 0.26
TRAV30A0A087WSZ9 WT1-210ENST00000639563 1494 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
TRAV30A0A087WSZ9 DTNBP1-201ENST00000338950 1880 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 26.1 ms