Protein–RNA interactions for Protein: A0A075B6N4

TRBV25-1, T-cell receptor beta variable 25-1 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV25-1A0A075B6N4 C16orf58-209ENST00000567994 1845 ntTSL 5 BASIC15.31■□□□□ 0.04
TRBV25-1A0A075B6N4 TOX2-201ENST00000341197 1880 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
TRBV25-1A0A075B6N4 LINC01960-201ENST00000563759 1884 ntBASIC15.31■□□□□ 0.04
TRBV25-1A0A075B6N4 NRL-203ENST00000397002 1976 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
TRBV25-1A0A075B6N4 SIMC1-202ENST00000341199 2056 ntAPPRIS P3 TSL 2 BASIC15.31■□□□□ 0.04
TRBV25-1A0A075B6N4 DIO3-201ENST00000510508 2102 ntAPPRIS P1 BASIC15.31■□□□□ 0.04
TRBV25-1A0A075B6N4 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
TRBV25-1A0A075B6N4 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC15.31■□□□□ 0.04
TRBV25-1A0A075B6N4 PFKFB3-219ENST00000640683 2311 ntTSL 5 BASIC15.31■□□□□ 0.04
TRBV25-1A0A075B6N4 SRRM3-204ENST00000611745 3612 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
TRBV25-1A0A075B6N4 USP48-201ENST00000308271 4595 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
TRBV25-1A0A075B6N4 LRP11-202ENST00000367368 1042 ntTSL 2 BASIC15.3■□□□□ 0.04
TRBV25-1A0A075B6N4 HDAC2-201ENST00000368632 2084 ntTSL 2 BASIC15.3■□□□□ 0.04
TRBV25-1A0A075B6N4 STK19-201ENST00000375331 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
TRBV25-1A0A075B6N4 TFPT-201ENST00000391757 774 ntTSL 5 BASIC15.3■□□□□ 0.04
TRBV25-1A0A075B6N4 TFPT-202ENST00000391758 804 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
TRBV25-1A0A075B6N4 ASB1-202ENST00000409297 878 ntTSL 5 BASIC15.3■□□□□ 0.04
TRBV25-1A0A075B6N4 TANGO2-210ENST00000432883 2084 ntTSL 2 BASIC15.3■□□□□ 0.04
TRBV25-1A0A075B6N4 METRNL-203ENST00000571814 1900 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
TRBV25-1A0A075B6N4 AMZ2-219ENST00000612294 1498 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
TRBV25-1A0A075B6N4 SPPL2B-211ENST00000614794 1559 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
TRBV25-1A0A075B6N4 EXOG-217ENST00000630638 197 ntTSL 5 BASIC15.3■□□□□ 0.04
TRBV25-1A0A075B6N4 DISC1-215ENST00000602281 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
TRBV25-1A0A075B6N4 OLFM1-205ENST00000371796 2492 ntTSL 2 BASIC15.29■□□□□ 0.04
TRBV25-1A0A075B6N4 SLC35A3-208ENST00000638336 2438 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
TRBV25-1A0A075B6N4 MEDAG-201ENST00000380482 2374 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
TRBV25-1A0A075B6N4 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
TRBV25-1A0A075B6N4 ACADVL-202ENST00000350303 2191 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
TRBV25-1A0A075B6N4 SLC19A1-212ENST00000567670 2029 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
TRBV25-1A0A075B6N4 FBXO31-201ENST00000311635 5934 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
TRBV25-1A0A075B6N4 PTPRJ-207ENST00000613246 7851 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
TRBV25-1A0A075B6N4 GNB3-201ENST00000229264 1923 ntAPPRIS P3 TSL 5 BASIC15.29■□□□□ 0.04
TRBV25-1A0A075B6N4 AL353743.1-201ENST00000637846 1769 ntTSL 5 BASIC15.29■□□□□ 0.04
TRBV25-1A0A075B6N4 AC087742.1-201ENST00000575880 1738 ntBASIC15.29■□□□□ 0.04
TRBV25-1A0A075B6N4 C1QTNF4-201ENST00000302514 1664 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
TRBV25-1A0A075B6N4 AVPR2-201ENST00000337474 1622 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
TRBV25-1A0A075B6N4 SH3RF3-AS1-201ENST00000567491 1604 ntBASIC15.29■□□□□ 0.04
TRBV25-1A0A075B6N4 IRF3-207ENST00000593922 1494 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
TRBV25-1A0A075B6N4 CFP-202ENST00000377005 1435 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
TRBV25-1A0A075B6N4 FAM107A-203ENST00000447756 1432 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
TRBV25-1A0A075B6N4 MARK1-205ENST00000611084 5321 ntAPPRIS ALT1 TSL 1 (best) BASIC15.29■□□□□ 0.04
TRBV25-1A0A075B6N4 CD72-202ENST00000378430 585 ntTSL 3 BASIC15.29■□□□□ 0.04
TRBV25-1A0A075B6N4 SDHAP1-204ENST00000427415 559 ntTSL 4 BASIC15.29■□□□□ 0.04
TRBV25-1A0A075B6N4 IGFBP7-203ENST00000514062 1251 ntAPPRIS ALT2 TSL 2 BASIC15.29■□□□□ 0.04
TRBV25-1A0A075B6N4 RAET1E-AS1-203ENST00000606915 1210 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
TRBV25-1A0A075B6N4 AC010997.5-201ENST00000609182 354 ntBASIC15.29■□□□□ 0.04
TRBV25-1A0A075B6N4 PKMYT1-201ENST00000262300 2171 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
TRBV25-1A0A075B6N4 PLEKHM2-202ENST00000375799 4122 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
TRBV25-1A0A075B6N4 DENND2D-202ENST00000369752 1894 ntAPPRIS ALT2 TSL 2 BASIC15.29■□□□□ 0.04
TRBV25-1A0A075B6N4 CHN1-203ENST00000409156 1761 ntTSL 2 BASIC15.29■□□□□ 0.04
TRBV25-1A0A075B6N4 EIF2B4-211ENST00000616081 1754 ntTSL 5 BASIC15.29■□□□□ 0.04
TRBV25-1A0A075B6N4 LRRC34-201ENST00000446859 1718 ntAPPRIS ALT2 TSL 2 BASIC15.29■□□□□ 0.04
TRBV25-1A0A075B6N4 ZXDB-201ENST00000374888 5894 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
TRBV25-1A0A075B6N4 MAP2K5-204ENST00000395476 1689 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
TRBV25-1A0A075B6N4 PRMT5-204ENST00000397441 2418 ntTSL 2 BASIC15.28■□□□□ 0.04
TRBV25-1A0A075B6N4 FAM129C-212ENST00000601861 2180 ntAPPRIS ALT2 TSL 2 BASIC15.28■□□□□ 0.04
TRBV25-1A0A075B6N4 CERS5-201ENST00000317551 2051 ntAPPRIS P3 TSL 2 BASIC15.28■□□□□ 0.04
TRBV25-1A0A075B6N4 TMUB1-201ENST00000297533 1353 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
TRBV25-1A0A075B6N4 POTED-202ENST00000620442 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
TRBV25-1A0A075B6N4 FMN2-201ENST00000319653 6434 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
TRBV25-1A0A075B6N4 RPL31-208ENST00000409733 825 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
TRBV25-1A0A075B6N4 SYCE1-204ENST00000432597 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
TRBV25-1A0A075B6N4 AC138207.2-201ENST00000583377 492 ntTSL 2 BASIC15.28■□□□□ 0.04
TRBV25-1A0A075B6N4 NKILA-201ENST00000613231 537 ntTSL 4 BASIC15.28■□□□□ 0.04
TRBV25-1A0A075B6N4 CDKN1C-204ENST00000440480 1811 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
TRBV25-1A0A075B6N4 SNX8-201ENST00000222990 4727 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
TRBV25-1A0A075B6N4 MCC-208ENST00000514701 2855 ntTSL 2 BASIC15.28■□□□□ 0.04
TRBV25-1A0A075B6N4 AC009102.2-201ENST00000606772 1639 ntBASIC15.28■□□□□ 0.04
TRBV25-1A0A075B6N4 TERF2IP-201ENST00000300086 2118 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
TRBV25-1A0A075B6N4 AC233992.2-201ENST00000531225 1596 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
TRBV25-1A0A075B6N4 MATN4-204ENST00000372756 2077 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
TRBV25-1A0A075B6N4 MGAT5B-201ENST00000301618 4486 ntAPPRIS P3 TSL 5 BASIC15.27■□□□□ 0.04
TRBV25-1A0A075B6N4 LACTB-202ENST00000413507 2978 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
TRBV25-1A0A075B6N4 MPND-202ENST00000359935 1475 ntAPPRIS ALT2 TSL 2 BASIC15.27■□□□□ 0.04
TRBV25-1A0A075B6N4 HSPBP1-206ENST00000587922 1449 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
TRBV25-1A0A075B6N4 TUBA1A-201ENST00000295766 1887 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.04
TRBV25-1A0A075B6N4 SHCBP1L-201ENST00000367547 2317 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
TRBV25-1A0A075B6N4 TSPY9P-201ENST00000440215 945 ntBASIC15.27■□□□□ 0.04
TRBV25-1A0A075B6N4 TSPY11P-201ENST00000442607 1045 ntBASIC15.27■□□□□ 0.04
TRBV25-1A0A075B6N4 AC239859.2-201ENST00000444165 318 ntBASIC15.27■□□□□ 0.04
TRBV25-1A0A075B6N4 LYSMD2-202ENST00000454181 1228 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
TRBV25-1A0A075B6N4 PTPA-204ENST00000355007 2515 ntTSL 5 BASIC15.27■□□□□ 0.03
TRBV25-1A0A075B6N4 RALGPS1-207ENST00000394022 1672 ntTSL 2 BASIC15.27■□□□□ 0.03
TRBV25-1A0A075B6N4 PLEKHO1-201ENST00000369124 2050 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
TRBV25-1A0A075B6N4 SMARCD1-201ENST00000381513 3237 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
TRBV25-1A0A075B6N4 ITGB1BP1-202ENST00000355346 1963 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
TRBV25-1A0A075B6N4 PKIB-204ENST00000368448 1561 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.03
TRBV25-1A0A075B6N4 SOX17-201ENST00000297316 2342 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
TRBV25-1A0A075B6N4 TMEM129-206ENST00000536901 2172 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
TRBV25-1A0A075B6N4 CBWD5-207ENST00000382405 1791 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
TRBV25-1A0A075B6N4 RFLNA-201ENST00000324038 2148 ntAPPRIS P2 TSL 2 BASIC15.26■□□□□ 0.03
TRBV25-1A0A075B6N4 TTC39C-202ENST00000317571 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
TRBV25-1A0A075B6N4 TTYH1-201ENST00000301194 2088 ntAPPRIS ALT1 TSL 1 (best) BASIC15.26■□□□□ 0.03
TRBV25-1A0A075B6N4 PTGER2-201ENST00000245457 2383 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
TRBV25-1A0A075B6N4 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
TRBV25-1A0A075B6N4 COL8A2-203ENST00000481785 2036 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
TRBV25-1A0A075B6N4 CBWD2-203ENST00000416503 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
TRBV25-1A0A075B6N4 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
TRBV25-1A0A075B6N4 C18orf25-204ENST00000615553 2329 ntTSL 5 BASIC15.26■□□□□ 0.03
TRBV25-1A0A075B6N4 KIRREL2-201ENST00000262625 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 18.1 ms