Protein–RNA interactions for Protein: Q8TAP4

LMO3, LIM domain only protein 3, humanhuman

Predictions only

Length 145 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3Q8TAP4 AC245128.2-201ENST00000412970 284 ntBASIC12.27□□□□□ -0.45
LMO3Q8TAP4 AC004000.1-201ENST00000414435 433 ntTSL 5 BASIC12.27□□□□□ -0.45
LMO3Q8TAP4 OR6V1-201ENST00000418316 1028 ntAPPRIS P1 BASIC12.27□□□□□ -0.45
LMO3Q8TAP4 LINC01320-201ENST00000423663 1109 ntTSL 2 BASIC12.27□□□□□ -0.45
LMO3Q8TAP4 MLN-202ENST00000430124 566 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
LMO3Q8TAP4 LINC01278-201ENST00000433061 529 ntTSL 3 BASIC12.27□□□□□ -0.45
LMO3Q8TAP4 YBX1P9-201ENST00000441264 679 ntBASIC12.27□□□□□ -0.45
LMO3Q8TAP4 AL096677.1-201ENST00000442884 814 ntTSL 3 BASIC12.27□□□□□ -0.45
LMO3Q8TAP4 RN7SL756P-201ENST00000488739 268 ntBASIC12.27□□□□□ -0.45
LMO3Q8TAP4 AC138035.2-201ENST00000509192 727 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
LMO3Q8TAP4 ZEB2P1-201ENST00000515048 1141 ntBASIC12.27□□□□□ -0.45
LMO3Q8TAP4 IGLV3-2-201ENST00000519345 229 ntBASIC12.27□□□□□ -0.45
LMO3Q8TAP4 AP001972.2-201ENST00000529304 216 ntTSL 5 BASIC12.27□□□□□ -0.45
LMO3Q8TAP4 MIR3689A-201ENST00000578854 78 ntBASIC12.27□□□□□ -0.45
LMO3Q8TAP4 AC100778.2-201ENST00000580150 483 ntTSL 5 BASIC12.27□□□□□ -0.45
LMO3Q8TAP4 AC145207.4-201ENST00000583521 450 ntTSL 5 BASIC12.27□□□□□ -0.45
LMO3Q8TAP4 AC012498.2-201ENST00000604586 372 ntBASIC12.27□□□□□ -0.45
LMO3Q8TAP4 ZRANB2-207ENST00000611683 1257 ntAPPRIS ALT2 TSL 2 BASIC12.27□□□□□ -0.45
LMO3Q8TAP4 GGNBP1-203ENST00000612409 592 ntTSL 5 BASIC12.27□□□□□ -0.45
LMO3Q8TAP4 DLG2-AS1_2.1-201ENST00000614607 218 ntBASIC12.27□□□□□ -0.45
LMO3Q8TAP4 AL590096.1-202ENST00000618162 580 ntTSL 3 BASIC12.27□□□□□ -0.45
LMO3Q8TAP4 NCS1-203ENST00000630865 1092 ntTSL 3 BASIC12.27□□□□□ -0.45
LMO3Q8TAP4 SIRPB1-204ENST00000381603 1715 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
LMO3Q8TAP4 AL122008.3-201ENST00000412483 1723 ntTSL 2 BASIC12.27□□□□□ -0.45
LMO3Q8TAP4 CACNA1G-207ENST00000429973 7120 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
LMO3Q8TAP4 CACNA1G-217ENST00000507336 7116 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
LMO3Q8TAP4 HEXA-AS1-201ENST00000567598 2676 ntBASIC12.27□□□□□ -0.45
LMO3Q8TAP4 C2orf88-201ENST00000340623 4035 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
LMO3Q8TAP4 AP4S1-201ENST00000216366 2256 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
LMO3Q8TAP4 ACOT9-202ENST00000379295 2768 ntTSL 2 BASIC12.27□□□□□ -0.45
LMO3Q8TAP4 FXR1-201ENST00000305586 3277 ntTSL 5 BASIC12.27□□□□□ -0.45
LMO3Q8TAP4 NFXL1-206ENST00000507489 3833 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
LMO3Q8TAP4 MAGED1-202ENST00000375695 2875 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
LMO3Q8TAP4 KCNA2-202ENST00000369770 1959 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
LMO3Q8TAP4 IL20RB-201ENST00000329582 2047 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
LMO3Q8TAP4 SLC39A14-203ENST00000359741 4641 ntAPPRIS P3 TSL 2 BASIC12.26□□□□□ -0.45
LMO3Q8TAP4 IQCB1-201ENST00000310864 2594 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
LMO3Q8TAP4 THRB-206ENST00000416420 2571 ntAPPRIS P2 TSL 2 BASIC12.26□□□□□ -0.45
LMO3Q8TAP4 MTFR1L-201ENST00000374300 2053 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
LMO3Q8TAP4 DAZAP2-205ENST00000449723 2098 ntTSL 5 BASIC12.26□□□□□ -0.45
LMO3Q8TAP4 EIF3L-201ENST00000381683 1599 ntTSL 2 BASIC12.26□□□□□ -0.45
LMO3Q8TAP4 HVCN1-209ENST00000620084 1568 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
LMO3Q8TAP4 HSPA12A-205ENST00000635765 5841 ntAPPRIS ALT2 TSL 5 BASIC12.26□□□□□ -0.45
LMO3Q8TAP4 CCDC149-202ENST00000389609 2127 ntAPPRIS P3 TSL 2 BASIC12.26□□□□□ -0.45
LMO3Q8TAP4 RANBP20P-201ENST00000557256 2104 ntBASIC12.26□□□□□ -0.45
LMO3Q8TAP4 TMEM8B-201ENST00000377988 3731 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
LMO3Q8TAP4 OSBP2-203ENST00000403222 3728 ntTSL 5 BASIC12.26□□□□□ -0.45
LMO3Q8TAP4 ZNF740-201ENST00000416904 8578 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
LMO3Q8TAP4 RANBP3-202ENST00000340578 3233 ntAPPRIS P4 TSL 1 (best) BASIC12.26□□□□□ -0.45
LMO3Q8TAP4 CHODL-207ENST00000543733 1637 ntTSL 2 BASIC12.26□□□□□ -0.45
LMO3Q8TAP4 AL031009.1-201ENST00000624137 2182 ntBASIC12.26□□□□□ -0.45
LMO3Q8TAP4 ANAPC7-201ENST00000450008 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
LMO3Q8TAP4 LIMCH1-213ENST00000511496 3439 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
LMO3Q8TAP4 CACNA1I-202ENST00000402142 10004 ntAPPRIS P4 TSL 1 (best) BASIC12.26□□□□□ -0.45
LMO3Q8TAP4 UGT1A9-201ENST00000354728 2416 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
LMO3Q8TAP4 ZNF75D-202ENST00000370766 5592 ntAPPRIS P3 TSL 1 (best) BASIC12.26□□□□□ -0.45
LMO3Q8TAP4 TGFBRAP1-203ENST00000595531 5595 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
LMO3Q8TAP4 ZNF691-204ENST00000372506 1859 ntAPPRIS P3 TSL 2 BASIC12.26□□□□□ -0.45
LMO3Q8TAP4 QRFPR-201ENST00000334383 1215 ntTSL 2 BASIC12.26□□□□□ -0.45
LMO3Q8TAP4 APOBEC3F-202ENST00000381565 616 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
LMO3Q8TAP4 AL049795.1-202ENST00000421616 786 ntTSL 3 BASIC12.26□□□□□ -0.45
LMO3Q8TAP4 CIDECP-203ENST00000424691 1088 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
LMO3Q8TAP4 LINC00571-201ENST00000434565 521 ntTSL 3 BASIC12.26□□□□□ -0.45
LMO3Q8TAP4 Z97205.1-201ENST00000451328 448 ntTSL 2 BASIC12.26□□□□□ -0.45
LMO3Q8TAP4 SLC2A10-202ENST00000486000 497 ntTSL 3 BASIC12.26□□□□□ -0.45
LMO3Q8TAP4 CRHBP-203ENST00000506501 912 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
LMO3Q8TAP4 AC106789.1-201ENST00000512927 570 ntTSL 4 BASIC12.26□□□□□ -0.45
LMO3Q8TAP4 HNRNPA1P60-201ENST00000526810 951 ntBASIC12.26□□□□□ -0.45
LMO3Q8TAP4 AL049836.1-201ENST00000553270 539 ntTSL 3 BASIC12.26□□□□□ -0.45
LMO3Q8TAP4 FAM174B-206ENST00000555696 548 ntAPPRIS ALT2 TSL 4 BASIC12.26□□□□□ -0.45
LMO3Q8TAP4 PPP2R5C-224ENST00000556946 735 ntTSL 2 BASIC12.26□□□□□ -0.45
LMO3Q8TAP4 TRAPPC2L-202ENST00000561840 558 ntTSL 5 BASIC12.26□□□□□ -0.45
LMO3Q8TAP4 RAB11A-204ENST00000565075 711 ntTSL 2 BASIC12.26□□□□□ -0.45
LMO3Q8TAP4 AC132872.1-201ENST00000566986 1195 ntBASIC12.26□□□□□ -0.45
LMO3Q8TAP4 PMM2-216ENST00000569958 698 ntTSL 2 BASIC12.26□□□□□ -0.45
LMO3Q8TAP4 AURKB-204ENST00000578549 939 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
LMO3Q8TAP4 LINC01529-207ENST00000637448 810 ntTSL 5 BASIC12.26□□□□□ -0.45
LMO3Q8TAP4 RC3H2-202ENST00000357244 3991 ntAPPRIS P1 TSL 5 BASIC12.26□□□□□ -0.45
LMO3Q8TAP4 ACSBG2-210ENST00000591403 2690 ntAPPRIS P3 TSL 1 (best) BASIC12.26□□□□□ -0.45
LMO3Q8TAP4 COBLL1-202ENST00000375458 9367 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
LMO3Q8TAP4 MIR9-3HG-203ENST00000546186 2718 ntTSL 2 BASIC12.26□□□□□ -0.45
LMO3Q8TAP4 LINC00682-202ENST00000499082 1384 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
LMO3Q8TAP4 LGR5-203ENST00000540815 2800 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
LMO3Q8TAP4 GDI2-202ENST00000380181 1408 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
LMO3Q8TAP4 ST3GAL2-202ENST00000393640 8872 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
LMO3Q8TAP4 PRIMA1-202ENST00000393140 3711 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
LMO3Q8TAP4 GGA3-205ENST00000578348 2251 ntTSL 2 BASIC12.26□□□□□ -0.45
LMO3Q8TAP4 PSMG3-AS1-203ENST00000457484 3839 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
LMO3Q8TAP4 GRID1-201ENST00000327946 5834 ntAPPRIS P1 TSL 2 BASIC12.26□□□□□ -0.45
LMO3Q8TAP4 ARHGEF15-201ENST00000361926 4159 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
LMO3Q8TAP4 STPG2-201ENST00000295268 1652 ntAPPRIS P2 TSL 1 (best) BASIC12.26□□□□□ -0.45
LMO3Q8TAP4 RAP2B-201ENST00000323534 8351 ntAPPRIS P1 BASIC12.26□□□□□ -0.45
LMO3Q8TAP4 PDE4C-203ENST00000447275 2542 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
LMO3Q8TAP4 NR3C2-209ENST00000625323 5909 ntTSL 5 BASIC12.26□□□□□ -0.45
LMO3Q8TAP4 TSPAN9-206ENST00000537971 4284 ntAPPRIS P1 TSL 3 BASIC12.25□□□□□ -0.45
LMO3Q8TAP4 TP53-201ENST00000269305 2579 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
LMO3Q8TAP4 TP53-226ENST00000620739 2579 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
LMO3Q8TAP4 IFT80-201ENST00000326448 4306 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
LMO3Q8TAP4 FOXJ3-201ENST00000361346 5225 ntAPPRIS P3 TSL 1 (best) BASIC12.25□□□□□ -0.45
LMO3Q8TAP4 ZNF862-201ENST00000223210 6950 ntAPPRIS P1 TSL 5 BASIC12.25□□□□□ -0.45
Retrieved 100 of 98,524 protein–RNA pairs in 69.5 ms