Protein–RNA interactions for Protein: Q9Y6C5

PTCH2, Protein patched homolog 2, humanhuman

Predictions only

Length 1,203 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH2Q9Y6C5 LYRM1-205ENST00000562740 931 ntTSL 1 (best) BASIC24.41■■□□□ 1.5
PTCH2Q9Y6C5 AC022167.3-201ENST00000564485 427 ntTSL 2 BASIC24.41■■□□□ 1.5
PTCH2Q9Y6C5 NREP-202ENST00000379671 2581 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
PTCH2Q9Y6C5 FUZ-212ENST00000528094 1479 ntTSL 2 BASIC24.4■■□□□ 1.5
PTCH2Q9Y6C5 AP003097.1-201ENST00000530657 1135 ntBASIC24.4■■□□□ 1.5
PTCH2Q9Y6C5 ISCU-212ENST00000547005 795 ntTSL 3 BASIC24.4■■□□□ 1.5
PTCH2Q9Y6C5 TGIF1-219ENST00000551541 990 ntTSL 2 BASIC24.4■■□□□ 1.5
PTCH2Q9Y6C5 KLHL26-205ENST00000599006 989 ntTSL 5 BASIC24.4■■□□□ 1.5
PTCH2Q9Y6C5 DPP7-201ENST00000371579 1590 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
PTCH2Q9Y6C5 SUGCT-209ENST00000628514 1591 ntAPPRIS P4 TSL 1 (best) BASIC24.4■■□□□ 1.5
PTCH2Q9Y6C5 SERTAD3-201ENST00000322354 1734 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
PTCH2Q9Y6C5 BX088645.1-201ENST00000636699 1728 ntAPPRIS P1 TSL 5 BASIC24.4■■□□□ 1.5
PTCH2Q9Y6C5 FAM86JP-203ENST00000485843 2012 ntTSL 1 (best) BASIC24.4■■□□□ 1.5
PTCH2Q9Y6C5 PICALM-224ENST00000630913 2261 ntTSL 5 BASIC24.4■■□□□ 1.5
PTCH2Q9Y6C5 FASTK-217ENST00000540185 1609 ntTSL 5 BASIC24.39■■□□□ 1.5
PTCH2Q9Y6C5 QTRT1-201ENST00000250237 1317 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.5
PTCH2Q9Y6C5 ECEL1-202ENST00000409941 2322 ntAPPRIS ALT1 TSL 1 (best) BASIC24.39■■□□□ 1.5
PTCH2Q9Y6C5 SAXO1-201ENST00000380530 1727 ntAPPRIS ALT2 TSL 2 BASIC24.39■■□□□ 1.5
PTCH2Q9Y6C5 GOLGA6L9-202ENST00000618348 1710 ntAPPRIS P1 TSL 5 BASIC24.39■■□□□ 1.5
PTCH2Q9Y6C5 MRPL15-201ENST00000260102 1147 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.49
PTCH2Q9Y6C5 F8A2-201ENST00000369505 1116 ntAPPRIS P1 BASIC24.39■■□□□ 1.49
PTCH2Q9Y6C5 ASIP-201ENST00000374954 586 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.49
PTCH2Q9Y6C5 FXN-202ENST00000396364 980 ntTSL 5 BASIC24.39■■□□□ 1.49
PTCH2Q9Y6C5 AL359182.2-201ENST00000457720 606 ntTSL 3 BASIC24.39■■□□□ 1.49
PTCH2Q9Y6C5 AC025754.1-201ENST00000507566 407 ntTSL 3 BASIC24.39■■□□□ 1.49
PTCH2Q9Y6C5 AC010331.1-201ENST00000611423 582 ntBASIC24.39■■□□□ 1.49
PTCH2Q9Y6C5 AC073912.3-201ENST00000624414 853 ntBASIC24.39■■□□□ 1.49
PTCH2Q9Y6C5 IGFBP1-201ENST00000275525 1653 ntAPPRIS P2 TSL 1 (best) BASIC24.39■■□□□ 1.49
PTCH2Q9Y6C5 GOLGA7-201ENST00000357743 2027 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.49
PTCH2Q9Y6C5 CLN3-240ENST00000631023 1586 ntTSL 5 BASIC24.38■■□□□ 1.49
PTCH2Q9Y6C5 CACNA2D1-203ENST00000423588 1429 ntTSL 1 (best) BASIC24.38■■□□□ 1.49
PTCH2Q9Y6C5 LINC00471-201ENST00000313064 1282 ntTSL 1 (best) BASIC24.38■■□□□ 1.49
PTCH2Q9Y6C5 C10orf91-201ENST00000321248 1257 ntTSL 1 (best) BASIC24.38■■□□□ 1.49
PTCH2Q9Y6C5 TMUB1-205ENST00000482202 899 ntAPPRIS P1 TSL 3 BASIC24.38■■□□□ 1.49
PTCH2Q9Y6C5 DLEU7-203ENST00000504404 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC24.38■■□□□ 1.49
PTCH2Q9Y6C5 CFL1-211ENST00000531407 1062 ntTSL 2 BASIC24.38■■□□□ 1.49
PTCH2Q9Y6C5 AL359736.2-201ENST00000621992 437 ntBASIC24.38■■□□□ 1.49
PTCH2Q9Y6C5 CDCA4-202ENST00000392590 1536 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
PTCH2Q9Y6C5 AMIGO1-201ENST00000369862 2229 ntAPPRIS P1 TSL 5 BASIC24.38■■□□□ 1.49
PTCH2Q9Y6C5 ADAD2-202ENST00000315906 1995 ntAPPRIS ALT2 TSL 1 (best) BASIC24.38■■□□□ 1.49
PTCH2Q9Y6C5 EED-207ENST00000528180 1745 ntTSL 5 BASIC24.38■■□□□ 1.49
PTCH2Q9Y6C5 LINC00543-201ENST00000567234 1845 ntBASIC24.38■■□□□ 1.49
PTCH2Q9Y6C5 DHRS4-204ENST00000543741 1340 ntTSL 2 BASIC24.37■■□□□ 1.49
PTCH2Q9Y6C5 AL360181.5-201ENST00000368554 1044 ntAPPRIS P1 TSL 2 BASIC24.37■■□□□ 1.49
PTCH2Q9Y6C5 CYB5R4-201ENST00000369679 768 ntTSL 3 BASIC24.37■■□□□ 1.49
PTCH2Q9Y6C5 GPR35-203ENST00000407714 1258 ntAPPRIS P3 TSL 1 (best) BASIC24.37■■□□□ 1.49
PTCH2Q9Y6C5 SMIM1-201ENST00000444870 546 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
PTCH2Q9Y6C5 ELOVL2-AS1-201ENST00000456190 737 ntTSL 3 BASIC24.37■■□□□ 1.49
PTCH2Q9Y6C5 AC008667.2-201ENST00000504413 469 ntTSL 3 BASIC24.37■■□□□ 1.49
PTCH2Q9Y6C5 PTGIR-205ENST00000597185 775 ntTSL 3 BASIC24.37■■□□□ 1.49
PTCH2Q9Y6C5 DNAH17-AS1-202ENST00000591373 1453 ntTSL 5 BASIC24.37■■□□□ 1.49
PTCH2Q9Y6C5 MRPL37-206ENST00000605337 1582 ntTSL 5 BASIC24.37■■□□□ 1.49
PTCH2Q9Y6C5 KCNK4-201ENST00000394525 1673 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
PTCH2Q9Y6C5 IQCJ-SCHIP1-202ENST00000460298 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC24.36■■□□□ 1.49
PTCH2Q9Y6C5 LRRC34-206ENST00000522526 1899 ntAPPRIS P3 TSL 1 (best) BASIC24.36■■□□□ 1.49
PTCH2Q9Y6C5 CD99-203ENST00000381184 918 ntAPPRIS ALT2 TSL 5 BASIC24.36■■□□□ 1.49
PTCH2Q9Y6C5 DUSP15-205ENST00000398084 1256 ntTSL 5 BASIC24.36■■□□□ 1.49
PTCH2Q9Y6C5 METTL5-206ENST00000409965 880 ntAPPRIS P2 TSL 1 (best) BASIC24.36■■□□□ 1.49
PTCH2Q9Y6C5 NUDT22-204ENST00000441250 986 ntAPPRIS ALT2 TSL 5 BASIC24.36■■□□□ 1.49
PTCH2Q9Y6C5 GXYLT1P3-201ENST00000453058 1193 ntBASIC24.36■■□□□ 1.49
PTCH2Q9Y6C5 AC021660.2-201ENST00000502999 388 ntTSL 3 BASIC24.36■■□□□ 1.49
PTCH2Q9Y6C5 UBE2K-204ENST00000503368 891 ntTSL 1 (best) BASIC24.36■■□□□ 1.49
PTCH2Q9Y6C5 LINC01301-204ENST00000530725 577 ntTSL 4 BASIC24.36■■□□□ 1.49
PTCH2Q9Y6C5 TSPAN11-202ENST00000535215 988 ntTSL 2 BASIC24.36■■□□□ 1.49
PTCH2Q9Y6C5 PLEKHB1-216ENST00000543085 632 ntTSL 3 BASIC24.36■■□□□ 1.49
PTCH2Q9Y6C5 MAX-217ENST00000557277 728 ntTSL 3 BASIC24.36■■□□□ 1.49
PTCH2Q9Y6C5 AC006435.1-201ENST00000571775 1065 ntTSL 5 BASIC24.36■■□□□ 1.49
PTCH2Q9Y6C5 GNPTG-201ENST00000204679 1983 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
PTCH2Q9Y6C5 FAM136A-201ENST00000037869 1810 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
PTCH2Q9Y6C5 AZIN2-201ENST00000294517 2182 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
PTCH2Q9Y6C5 IL17RE-203ENST00000421412 2158 ntAPPRIS ALT2 TSL 1 (best) BASIC24.35■■□□□ 1.49
PTCH2Q9Y6C5 GRTP1-201ENST00000326039 1294 ntTSL 1 (best) BASIC24.35■■□□□ 1.49
PTCH2Q9Y6C5 BOLA1-203ENST00000369153 1096 ntAPPRIS P1 TSL 3 BASIC24.35■■□□□ 1.49
PTCH2Q9Y6C5 TMEM35B-201ENST00000373337 922 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
PTCH2Q9Y6C5 ANKRD39-201ENST00000393537 976 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
PTCH2Q9Y6C5 OR2A1-AS1-201ENST00000462305 773 ntBASIC24.35■■□□□ 1.49
PTCH2Q9Y6C5 AC004889.1-204ENST00000474656 773 ntTSL 3 BASIC24.35■■□□□ 1.49
PTCH2Q9Y6C5 TNFRSF1B-204ENST00000536782 557 ntTSL 1 (best) BASIC24.35■■□□□ 1.49
PTCH2Q9Y6C5 SEC23A-213ENST00000557280 561 ntTSL 4 BASIC24.35■■□□□ 1.49
PTCH2Q9Y6C5 BEAN1-AS1-201ENST00000564618 533 ntTSL 4 BASIC24.35■■□□□ 1.49
PTCH2Q9Y6C5 REST-211ENST00000640168 1268 ntTSL 1 (best) BASIC24.35■■□□□ 1.49
PTCH2Q9Y6C5 ECHDC2-221ENST00000536120 1446 ntTSL 3 BASIC24.35■■□□□ 1.49
PTCH2Q9Y6C5 HDGFL2-210ENST00000621835 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC24.35■■□□□ 1.49
PTCH2Q9Y6C5 DENND2D-202ENST00000369752 1894 ntAPPRIS ALT2 TSL 2 BASIC24.34■■□□□ 1.49
PTCH2Q9Y6C5 CASTOR1-201ENST00000404953 1460 ntTSL 5 BASIC24.34■■□□□ 1.49
PTCH2Q9Y6C5 TRPT1-201ENST00000317459 962 ntAPPRIS P3 TSL 1 (best) BASIC24.34■■□□□ 1.49
PTCH2Q9Y6C5 AC211429.1-201ENST00000415277 523 ntBASIC24.34■■□□□ 1.49
PTCH2Q9Y6C5 MNX1-AS1-201ENST00000480284 1041 ntTSL 1 (best) BASIC24.34■■□□□ 1.49
PTCH2Q9Y6C5 RPS23-206ENST00000510210 1058 ntTSL 2 BASIC24.34■■□□□ 1.49
PTCH2Q9Y6C5 AC021087.1-201ENST00000512642 522 ntTSL 2 BASIC24.34■■□□□ 1.49
PTCH2Q9Y6C5 SPI1-204ENST00000533968 1290 ntTSL 1 (best) BASIC24.34■■□□□ 1.49
PTCH2Q9Y6C5 MIR4497-201ENST00000583208 89 ntBASIC24.34■■□□□ 1.49
PTCH2Q9Y6C5 RITA1-203ENST00000552495 1898 ntTSL 2 BASIC24.34■■□□□ 1.49
PTCH2Q9Y6C5 TPPP3-204ENST00000562206 1410 ntAPPRIS P1 TSL 2 BASIC24.34■■□□□ 1.49
PTCH2Q9Y6C5 AC010980.2-201ENST00000587099 1412 ntBASIC24.34■■□□□ 1.49
PTCH2Q9Y6C5 SLC25A24P1-201ENST00000411846 1569 ntTSL 5 BASIC24.33■■□□□ 1.49
PTCH2Q9Y6C5 AP000547.3-201ENST00000592918 1576 ntTSL 1 (best) BASIC24.33■■□□□ 1.49
PTCH2Q9Y6C5 NOC4L-201ENST00000330579 1632 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.49
PTCH2Q9Y6C5 CAPN10-203ENST00000352879 862 ntTSL 1 (best) BASIC24.33■■□□□ 1.49
PTCH2Q9Y6C5 NMRK1-201ENST00000361092 1185 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.49
Retrieved 100 of 98,524 protein–RNA pairs in 22.9 ms