Protein–RNA interactions for Protein: Q9Y6A2

CYP46A1, Cholesterol 24-hydroxylase, humanhuman

Predictions only

Length 500 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CYP46A1Q9Y6A2 ASAP2-201ENST00000281419 5712 ntAPPRIS P3 TSL 1 (best) BASIC25.4■■□□□ 1.66
CYP46A1Q9Y6A2 ALDH16A1-202ENST00000455361 2470 ntTSL 2 BASIC25.4■■□□□ 1.66
CYP46A1Q9Y6A2 DRAM2-201ENST00000286692 2246 ntAPPRIS P1 TSL 1 (best) BASIC25.4■■□□□ 1.66
CYP46A1Q9Y6A2 SKI-201ENST00000378536 5613 ntAPPRIS P1 TSL 1 (best) BASIC25.4■■□□□ 1.66
CYP46A1Q9Y6A2 LPCAT4-201ENST00000314891 2262 ntAPPRIS P1 TSL 1 (best) BASIC25.39■■□□□ 1.66
CYP46A1Q9Y6A2 C7orf25-201ENST00000350427 2451 ntAPPRIS P1 TSL 2 BASIC25.39■■□□□ 1.66
CYP46A1Q9Y6A2 MRPL41-201ENST00000371443 1262 ntAPPRIS P1 TSL 1 (best) BASIC25.39■■□□□ 1.66
CYP46A1Q9Y6A2 CCDC107-203ENST00000378407 899 ntAPPRIS ALT2 TSL 2 BASIC25.39■■□□□ 1.66
CYP46A1Q9Y6A2 SLC26A1-203ENST00000398520 1111 ntTSL 1 (best) BASIC25.39■■□□□ 1.66
CYP46A1Q9Y6A2 HOMER3-206ENST00000594439 982 ntTSL 1 (best) BASIC25.39■■□□□ 1.66
CYP46A1Q9Y6A2 FPGS-202ENST00000373228 1383 ntTSL 5 BASIC25.39■■□□□ 1.65
CYP46A1Q9Y6A2 FAH-202ENST00000407106 2152 ntAPPRIS P1 TSL 5 BASIC25.39■■□□□ 1.65
CYP46A1Q9Y6A2 KIF12-202ENST00000468460 2162 ntAPPRIS ALT2 TSL 5 BASIC25.39■■□□□ 1.65
CYP46A1Q9Y6A2 ACSL1-205ENST00000504900 1583 ntTSL 5 BASIC25.39■■□□□ 1.65
CYP46A1Q9Y6A2 PSIP1-201ENST00000380715 1966 ntTSL 1 (best) BASIC25.38■■□□□ 1.65
CYP46A1Q9Y6A2 NFS1-204ENST00000397425 1956 ntTSL 5 BASIC25.38■■□□□ 1.65
CYP46A1Q9Y6A2 CCNL1-203ENST00000461804 1998 ntTSL 2 BASIC25.38■■□□□ 1.65
CYP46A1Q9Y6A2 CAPG-201ENST00000263867 1442 ntAPPRIS P1 TSL 1 (best) BASIC25.38■■□□□ 1.65
CYP46A1Q9Y6A2 ZIM2-201ENST00000593711 2083 ntAPPRIS P1 TSL 1 (best) BASIC25.38■■□□□ 1.65
CYP46A1Q9Y6A2 HAUS4-201ENST00000206474 1642 ntAPPRIS P1 TSL 1 (best) BASIC25.38■■□□□ 1.65
CYP46A1Q9Y6A2 SLC25A39-201ENST00000225308 1607 ntAPPRIS P3 TSL 1 (best) BASIC25.38■■□□□ 1.65
CYP46A1Q9Y6A2 B4GALNT1-203ENST00000449184 1633 ntTSL 2 BASIC25.38■■□□□ 1.65
CYP46A1Q9Y6A2 MSL1-204ENST00000578648 2267 ntTSL 5 BASIC25.38■■□□□ 1.65
CYP46A1Q9Y6A2 AC126544.1-201ENST00000580842 1059 ntBASIC25.38■■□□□ 1.65
CYP46A1Q9Y6A2 AC104564.3-201ENST00000582367 638 ntBASIC25.38■■□□□ 1.65
CYP46A1Q9Y6A2 PRSS33-202ENST00000570702 1676 ntAPPRIS P1 TSL 1 (best) BASIC25.38■■□□□ 1.65
CYP46A1Q9Y6A2 Z98882.1-201ENST00000622160 2253 ntBASIC25.38■■□□□ 1.65
CYP46A1Q9Y6A2 OLIG2-202ENST00000382357 2578 ntAPPRIS P1 TSL 1 (best) BASIC25.38■■□□□ 1.65
CYP46A1Q9Y6A2 PAQR6-212ENST00000540423 1729 ntTSL 3 BASIC25.37■■□□□ 1.65
CYP46A1Q9Y6A2 DAPK3-202ENST00000545797 2257 ntAPPRIS P1 TSL 2 BASIC25.37■■□□□ 1.65
CYP46A1Q9Y6A2 KLHL17-205ENST00000622660 1950 ntTSL 5 BASIC25.37■■□□□ 1.65
CYP46A1Q9Y6A2 ZNF419-203ENST00000354197 1569 ntTSL 5 BASIC25.37■■□□□ 1.65
CYP46A1Q9Y6A2 RNF208-201ENST00000391553 1077 ntAPPRIS P1 BASIC25.37■■□□□ 1.65
CYP46A1Q9Y6A2 PBX2P1-201ENST00000493219 1291 ntBASIC25.37■■□□□ 1.65
CYP46A1Q9Y6A2 NDUFS3-206ENST00000528192 561 ntTSL 5 BASIC25.37■■□□□ 1.65
CYP46A1Q9Y6A2 ZNF846-212ENST00000592859 1206 ntTSL 2 BASIC25.37■■□□□ 1.65
CYP46A1Q9Y6A2 HRH3-203ENST00000611492 900 ntTSL 1 (best) BASIC25.37■■□□□ 1.65
CYP46A1Q9Y6A2 BAG1-212ENST00000641048 1038 ntAPPRIS P3 BASIC25.37■■□□□ 1.65
CYP46A1Q9Y6A2 DGKQ-201ENST00000273814 4636 ntAPPRIS P2 TSL 1 (best) BASIC25.37■■□□□ 1.65
CYP46A1Q9Y6A2 SNX7-201ENST00000306121 1734 ntAPPRIS P1 TSL 1 (best) BASIC25.37■■□□□ 1.65
CYP46A1Q9Y6A2 SCRN2-212ENST00000584123 1745 ntTSL 1 (best) BASIC25.37■■□□□ 1.65
CYP46A1Q9Y6A2 RAB3A-201ENST00000222256 1528 ntAPPRIS P1 TSL 1 (best) BASIC25.37■■□□□ 1.65
CYP46A1Q9Y6A2 MYCN-201ENST00000281043 2602 ntAPPRIS P1 TSL 5 BASIC25.36■■□□□ 1.65
CYP46A1Q9Y6A2 WDR86-203ENST00000469830 1691 ntTSL 2 BASIC25.36■■□□□ 1.65
CYP46A1Q9Y6A2 SEC61A2-205ENST00000379033 2462 ntTSL 2 BASIC25.36■■□□□ 1.65
CYP46A1Q9Y6A2 C20orf144-201ENST00000375222 571 ntAPPRIS P1 TSL 1 (best) BASIC25.36■■□□□ 1.65
CYP46A1Q9Y6A2 GADD45G-202ENST00000375769 977 ntTSL 2 BASIC25.36■■□□□ 1.65
CYP46A1Q9Y6A2 SSPN-204ENST00000535504 419 ntTSL 1 (best) BASIC25.36■■□□□ 1.65
CYP46A1Q9Y6A2 AC008764.7-201ENST00000593779 1081 ntBASIC25.36■■□□□ 1.65
CYP46A1Q9Y6A2 ZYG11B-202ENST00000545132 2294 ntTSL 2 BASIC25.36■■□□□ 1.65
CYP46A1Q9Y6A2 ACHE-201ENST00000241069 2172 ntAPPRIS P1 TSL 1 (best) BASIC25.36■■□□□ 1.65
CYP46A1Q9Y6A2 CYHR1-201ENST00000306145 1409 ntTSL 1 (best) BASIC25.36■■□□□ 1.65
CYP46A1Q9Y6A2 DPYS-201ENST00000351513 2127 ntAPPRIS P1 TSL 1 (best) BASIC25.36■■□□□ 1.65
CYP46A1Q9Y6A2 FBXL19-205ENST00000562319 2462 ntAPPRIS ALT2 TSL 2 BASIC25.36■■□□□ 1.65
CYP46A1Q9Y6A2 SETD9-211ENST00000628593 1306 ntTSL 1 (best) BASIC25.36■■□□□ 1.65
CYP46A1Q9Y6A2 GNB3-201ENST00000229264 1923 ntAPPRIS P3 TSL 5 BASIC25.35■■□□□ 1.65
CYP46A1Q9Y6A2 TERF2-201ENST00000254942 2983 ntAPPRIS P1 TSL 1 (best) BASIC25.35■■□□□ 1.65
CYP46A1Q9Y6A2 FNDC11-204ENST00000615526 2954 ntAPPRIS P1 BASIC25.35■■□□□ 1.65
CYP46A1Q9Y6A2 CLDND1-202ENST00000394180 2228 ntAPPRIS P1 TSL 1 (best) BASIC25.35■■□□□ 1.65
CYP46A1Q9Y6A2 INS-202ENST00000381330 597 ntAPPRIS P1 TSL 1 (best) BASIC25.35■■□□□ 1.65
CYP46A1Q9Y6A2 CAMTA1-208ENST00000473578 567 ntTSL 1 (best) BASIC25.35■■□□□ 1.65
CYP46A1Q9Y6A2 SMUG1P1-201ENST00000590640 811 ntBASIC25.35■■□□□ 1.65
CYP46A1Q9Y6A2 PXK-211ENST00000484288 2031 ntTSL 1 (best) BASIC25.35■■□□□ 1.65
CYP46A1Q9Y6A2 PRICKLE3-206ENST00000599218 2062 ntAPPRIS P3 TSL 1 (best) BASIC25.35■■□□□ 1.65
CYP46A1Q9Y6A2 CKMT1B-207ENST00000441322 1747 ntAPPRIS P1 TSL 1 (best) BASIC25.34■■□□□ 1.65
CYP46A1Q9Y6A2 SIRT3-204ENST00000525319 1475 ntAPPRIS ALT2 TSL 2 BASIC25.34■■□□□ 1.65
CYP46A1Q9Y6A2 MEIS3-202ENST00000441740 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC25.34■■□□□ 1.65
CYP46A1Q9Y6A2 BBC3-202ENST00000341983 1538 ntTSL 1 (best) BASIC25.34■■□□□ 1.65
CYP46A1Q9Y6A2 SCO2-204ENST00000543927 1051 ntAPPRIS P1 TSL 2 BASIC25.34■■□□□ 1.65
CYP46A1Q9Y6A2 CTAG1A-201ENST00000593606 993 ntTSL 5 BASIC25.34■■□□□ 1.65
CYP46A1Q9Y6A2 AC106739.1-201ENST00000617035 715 ntBASIC25.34■■□□□ 1.65
CYP46A1Q9Y6A2 SOCS7-202ENST00000613678 1827 ntTSL 5 BASIC25.34■■□□□ 1.65
CYP46A1Q9Y6A2 LTK-201ENST00000263800 3046 ntAPPRIS P4 TSL 1 (best) BASIC25.34■■□□□ 1.65
CYP46A1Q9Y6A2 ATP6AP1-201ENST00000369762 2099 ntAPPRIS P1 TSL 1 (best) BASIC25.33■■□□□ 1.65
CYP46A1Q9Y6A2 CDKN2C-203ENST00000396148 2086 ntAPPRIS P1 TSL 1 (best) BASIC25.33■■□□□ 1.65
CYP46A1Q9Y6A2 TGFBR1-202ENST00000374994 6516 ntAPPRIS P1 TSL 1 (best) BASIC25.33■■□□□ 1.65
CYP46A1Q9Y6A2 PCGF3-202ENST00000400151 1175 ntTSL 2 BASIC25.33■■□□□ 1.65
CYP46A1Q9Y6A2 TANGO2-212ENST00000434570 2180 ntTSL 2 BASIC25.33■■□□□ 1.65
CYP46A1Q9Y6A2 IGHV3-19-201ENST00000521488 291 ntBASIC25.33■■□□□ 1.65
CYP46A1Q9Y6A2 CDKN3-207ENST00000543789 610 ntTSL 5 BASIC25.33■■□□□ 1.65
CYP46A1Q9Y6A2 AL359317.1-201ENST00000556316 578 ntTSL 4 BASIC25.33■■□□□ 1.65
CYP46A1Q9Y6A2 LINC02136-201ENST00000567469 530 ntTSL 4 BASIC25.33■■□□□ 1.65
CYP46A1Q9Y6A2 GNB2-209ENST00000436220 1479 ntTSL 5 BASIC25.33■■□□□ 1.65
CYP46A1Q9Y6A2 HERC2P8-204ENST00000567073 1988 ntTSL 5 BASIC25.33■■□□□ 1.64
CYP46A1Q9Y6A2 PPP3CC-201ENST00000240139 2189 ntAPPRIS P3 TSL 1 (best) BASIC25.32■■□□□ 1.64
CYP46A1Q9Y6A2 KIF12-207ENST00000640217 2194 ntAPPRIS P5 TSL 5 BASIC25.32■■□□□ 1.64
CYP46A1Q9Y6A2 USP48-205ENST00000421625 2818 ntTSL 2 BASIC25.32■■□□□ 1.64
CYP46A1Q9Y6A2 AC099791.1-201ENST00000416440 715 ntBASIC25.32■■□□□ 1.64
CYP46A1Q9Y6A2 FAM174B-207ENST00000555748 866 ntAPPRIS ALT2 TSL 3 BASIC25.32■■□□□ 1.64
CYP46A1Q9Y6A2 AC093249.6-202ENST00000568500 1142 ntTSL 2 BASIC25.32■■□□□ 1.64
CYP46A1Q9Y6A2 ACAP1-206ENST00000571471 320 ntTSL 2 BASIC25.32■■□□□ 1.64
CYP46A1Q9Y6A2 ST3GAL3-207ENST00000353126 1969 ntTSL 5 BASIC25.32■■□□□ 1.64
CYP46A1Q9Y6A2 INPPL1-201ENST00000298229 4733 ntAPPRIS P1 TSL 1 (best) BASIC25.32■■□□□ 1.64
CYP46A1Q9Y6A2 AVPR2-203ENST00000370049 1307 ntTSL 1 (best) BASIC25.32■■□□□ 1.64
CYP46A1Q9Y6A2 VRK2-201ENST00000340157 1888 ntAPPRIS P3 TSL 1 (best) BASIC25.32■■□□□ 1.64
CYP46A1Q9Y6A2 PKD1P6-201ENST00000343738 4769 ntBASIC25.32■■□□□ 1.64
CYP46A1Q9Y6A2 MFF-203ENST00000349901 1716 ntTSL 2 BASIC25.32■■□□□ 1.64
CYP46A1Q9Y6A2 LRP5L-203ENST00000444995 1714 ntAPPRIS ALT2 TSL 5 BASIC25.32■■□□□ 1.64
CYP46A1Q9Y6A2 REPS2-202ENST00000357277 7953 ntAPPRIS P3 TSL 1 (best) BASIC25.31■■□□□ 1.64
CYP46A1Q9Y6A2 AC003102.1-202ENST00000563394 1796 ntBASIC25.31■■□□□ 1.64
Retrieved 100 of 98,524 protein–RNA pairs in 22.3 ms