Protein–RNA interactions for Protein: Q9Y5W9

SNX11, Sorting nexin-11, humanhuman

Predictions only

Length 270 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX11Q9Y5W9 CCSER2-202ENST00000359979 2066 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
SNX11Q9Y5W9 PEX10-204ENST00000507596 1941 ntAPPRIS ALT1 TSL 5 BASIC21.25■□□□□ 0.99
SNX11Q9Y5W9 SGMS1-210ENST00000619438 1680 ntTSL 5 BASIC21.24■□□□□ 0.99
SNX11Q9Y5W9 MFF-207ENST00000409565 1548 ntTSL 2 BASIC21.24■□□□□ 0.99
SNX11Q9Y5W9 DIXDC1-205ENST00000529225 1945 ntTSL 5 BASIC21.24■□□□□ 0.99
SNX11Q9Y5W9 KDF1-201ENST00000320567 1793 ntAPPRIS P1 TSL 2 BASIC21.24■□□□□ 0.99
SNX11Q9Y5W9 METTL15-202ENST00000403099 795 ntTSL 5 BASIC21.24■□□□□ 0.99
SNX11Q9Y5W9 EIF5A-205ENST00000419711 1271 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
SNX11Q9Y5W9 GUSBP6-202ENST00000438529 1198 ntBASIC21.24■□□□□ 0.99
SNX11Q9Y5W9 NDUFS3-207ENST00000529276 558 ntTSL 2 BASIC21.24■□□□□ 0.99
SNX11Q9Y5W9 BRI3-207ENST00000539286 699 ntTSL 2 BASIC21.24■□□□□ 0.99
SNX11Q9Y5W9 MVB12A-212ENST00000543795 1154 ntAPPRIS P1 TSL 5 BASIC21.24■□□□□ 0.99
SNX11Q9Y5W9 SLC7A5P2-201ENST00000553010 536 ntBASIC21.24■□□□□ 0.99
SNX11Q9Y5W9 HERC2P5-204ENST00000569697 1214 ntTSL 2 BASIC21.24■□□□□ 0.99
SNX11Q9Y5W9 TRAPPC6A-205ENST00000592647 514 ntTSL 2 BASIC21.24■□□□□ 0.99
SNX11Q9Y5W9 MYCNOS-205ENST00000641950 531 ntBASIC21.24■□□□□ 0.99
SNX11Q9Y5W9 OXCT2-201ENST00000327582 1826 ntAPPRIS P1 BASIC21.24■□□□□ 0.99
SNX11Q9Y5W9 ARL6IP4-204ENST00000392435 1339 ntAPPRIS ALT2 TSL 1 (best) BASIC21.24■□□□□ 0.99
SNX11Q9Y5W9 AC025164.2-201ENST00000501008 1898 ntTSL 5 BASIC21.24■□□□□ 0.99
SNX11Q9Y5W9 RAB3A-201ENST00000222256 1528 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
SNX11Q9Y5W9 STAP2-206ENST00000600324 1508 ntAPPRIS P3 TSL 2 BASIC21.24■□□□□ 0.99
SNX11Q9Y5W9 ST8SIA6-201ENST00000377602 2276 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
SNX11Q9Y5W9 SIX3-201ENST00000260653 2523 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
SNX11Q9Y5W9 USP45-202ENST00000329966 1444 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
SNX11Q9Y5W9 LHX2-201ENST00000373615 2554 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
SNX11Q9Y5W9 BFSP1-202ENST00000377873 2207 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
SNX11Q9Y5W9 MT3-201ENST00000200691 569 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
SNX11Q9Y5W9 HIST1H2AM-201ENST00000359611 393 ntAPPRIS P1 BASIC21.23■□□□□ 0.99
SNX11Q9Y5W9 LINC01117-201ENST00000443670 699 ntTSL 5 BASIC21.23■□□□□ 0.99
SNX11Q9Y5W9 SERP1-208ENST00000491660 830 ntTSL 2 BASIC21.23■□□□□ 0.99
SNX11Q9Y5W9 CAMTA1-216ENST00000557126 486 ntTSL 2 BASIC21.23■□□□□ 0.99
SNX11Q9Y5W9 AC016888.1-201ENST00000585285 565 ntTSL 3 BASIC21.23■□□□□ 0.99
SNX11Q9Y5W9 TFG-210ENST00000620299 1289 ntTSL 5 BASIC21.23■□□□□ 0.99
SNX11Q9Y5W9 VIL1-204ENST00000440053 1454 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
SNX11Q9Y5W9 SPAG7-205ENST00000573366 1668 ntTSL 3 BASIC21.23■□□□□ 0.99
SNX11Q9Y5W9 HOXC8-201ENST00000040584 1889 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
SNX11Q9Y5W9 EPO-201ENST00000252723 1330 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
SNX11Q9Y5W9 RBM4B-203ENST00000525754 2339 ntAPPRIS P1 TSL 2 BASIC21.22■□□□□ 0.99
SNX11Q9Y5W9 MAIP1-201ENST00000295079 1495 ntAPPRIS P2 TSL 2 BASIC21.22■□□□□ 0.99
SNX11Q9Y5W9 NFS1-201ENST00000306750 738 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
SNX11Q9Y5W9 BID-202ENST00000342111 854 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
SNX11Q9Y5W9 TSPY20P-201ENST00000450910 630 ntBASIC21.22■□□□□ 0.99
SNX11Q9Y5W9 PACRGL-206ENST00000502374 1034 ntTSL 2 BASIC21.22■□□□□ 0.99
SNX11Q9Y5W9 TP53I11-215ENST00000531928 1078 ntTSL 3 BASIC21.22■□□□□ 0.99
SNX11Q9Y5W9 OAS3-207ENST00000551007 998 ntTSL 2 BASIC21.22■□□□□ 0.99
SNX11Q9Y5W9 AL138781.1-201ENST00000566567 1274 ntBASIC21.22■□□□□ 0.99
SNX11Q9Y5W9 AC005697.1-201ENST00000582441 582 ntAPPRIS P1 TSL 4 BASIC21.22■□□□□ 0.99
SNX11Q9Y5W9 PARP1-210ENST00000629232 477 ntTSL 5 BASIC21.22■□□□□ 0.99
SNX11Q9Y5W9 SLC2A11-202ENST00000316185 1555 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
SNX11Q9Y5W9 AC055733.4-201ENST00000638462 1354 ntBASIC21.22■□□□□ 0.99
SNX11Q9Y5W9 NCK2-201ENST00000233154 2683 ntAPPRIS P1 TSL 5 BASIC21.22■□□□□ 0.99
SNX11Q9Y5W9 DCPS-201ENST00000263579 1479 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
SNX11Q9Y5W9 ARL5A-202ENST00000428992 747 ntTSL 2 BASIC21.21■□□□□ 0.99
SNX11Q9Y5W9 AC093833.1-201ENST00000442821 553 ntTSL 5 BASIC21.21■□□□□ 0.99
SNX11Q9Y5W9 EID2B-201ENST00000326282 1865 ntAPPRIS P1 BASIC21.21■□□□□ 0.99
SNX11Q9Y5W9 ZNF668-205ENST00000426488 2282 ntTSL 5 BASIC21.21■□□□□ 0.99
SNX11Q9Y5W9 CACNB1-203ENST00000394310 1753 ntAPPRIS ALT1 TSL 1 (best) BASIC21.2■□□□□ 0.99
SNX11Q9Y5W9 TCF3-203ENST00000395423 2779 ntTSL 5 BASIC21.2■□□□□ 0.98
SNX11Q9Y5W9 DDN-AS1-202ENST00000547866 2114 ntTSL 3 BASIC21.2■□□□□ 0.98
SNX11Q9Y5W9 CREB3L3-202ENST00000595923 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.98
SNX11Q9Y5W9 NKIRAS2-206ENST00000393885 1909 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
SNX11Q9Y5W9 PFKFB3-201ENST00000317350 1999 ntAPPRIS ALT1 TSL 5 BASIC21.2■□□□□ 0.98
SNX11Q9Y5W9 IL15RA-208ENST00000397251 1046 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.98
SNX11Q9Y5W9 AGAP1-IT1-201ENST00000440498 664 ntTSL 3 BASIC21.2■□□□□ 0.98
SNX11Q9Y5W9 IDH1-AS1-202ENST00000448588 489 ntTSL 3 BASIC21.2■□□□□ 0.98
SNX11Q9Y5W9 NCAPD3-204ENST00000526422 1060 ntAPPRIS ALT2 TSL 2 BASIC21.2■□□□□ 0.98
SNX11Q9Y5W9 ABCC6P2-202ENST00000542005 706 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
SNX11Q9Y5W9 KRT18P6-201ENST00000555540 1265 ntBASIC21.2■□□□□ 0.98
SNX11Q9Y5W9 KLF13-207ENST00000560473 489 ntTSL 3 BASIC21.2■□□□□ 0.98
SNX11Q9Y5W9 AC106738.1-201ENST00000560487 359 ntTSL 3 BASIC21.2■□□□□ 0.98
SNX11Q9Y5W9 AC007216.1-201ENST00000570197 601 ntTSL 4 BASIC21.2■□□□□ 0.98
SNX11Q9Y5W9 ABCC6-204ENST00000575728 714 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
SNX11Q9Y5W9 IL15RA-221ENST00000620865 1037 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.98
SNX11Q9Y5W9 IL15RA-222ENST00000622442 1160 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.98
SNX11Q9Y5W9 UNC119-202ENST00000335765 1424 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
SNX11Q9Y5W9 C21orf2-203ENST00000397956 1634 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
SNX11Q9Y5W9 FGFRL1-203ENST00000504138 1663 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
SNX11Q9Y5W9 STOML1-201ENST00000316900 2169 ntTSL 2 BASIC21.19■□□□□ 0.98
SNX11Q9Y5W9 CEACAM4-201ENST00000221954 1205 ntAPPRIS P2 TSL 1 (best) BASIC21.19■□□□□ 0.98
SNX11Q9Y5W9 FITM1-201ENST00000267426 1194 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
SNX11Q9Y5W9 BHLHA15-201ENST00000314018 706 ntAPPRIS P1 BASIC21.19■□□□□ 0.98
SNX11Q9Y5W9 SLC29A4P1-201ENST00000398760 971 ntBASIC21.19■□□□□ 0.98
SNX11Q9Y5W9 SNAP23-210ENST00000564153 775 ntTSL 2 BASIC21.19■□□□□ 0.98
SNX11Q9Y5W9 CEACAM4-203ENST00000600925 899 ntAPPRIS ALT2 TSL 2 BASIC21.19■□□□□ 0.98
SNX11Q9Y5W9 BHLHA15-202ENST00000609256 796 ntAPPRIS P1 TSL 3 BASIC21.19■□□□□ 0.98
SNX11Q9Y5W9 PRMT1-221ENST00000610806 1192 ntTSL 3 BASIC21.19■□□□□ 0.98
SNX11Q9Y5W9 DONSON-210ENST00000453626 2332 ntTSL 5 BASIC21.19■□□□□ 0.98
SNX11Q9Y5W9 FAM136A-201ENST00000037869 1810 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
SNX11Q9Y5W9 STRBP-202ENST00000360998 2990 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
SNX11Q9Y5W9 KLHL36-201ENST00000258157 1974 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
SNX11Q9Y5W9 OSCAR-201ENST00000284648 2055 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
SNX11Q9Y5W9 FAM160B1-201ENST00000369246 666 ntTSL 2 BASIC21.18■□□□□ 0.98
SNX11Q9Y5W9 ARL6IP4-205ENST00000412505 818 ntTSL 5 BASIC21.18■□□□□ 0.98
SNX11Q9Y5W9 TPT1-AS1-211ENST00000520622 604 ntTSL 4 BASIC21.18■□□□□ 0.98
SNX11Q9Y5W9 PFKL-212ENST00000628044 129 ntTSL 3 BASIC21.18■□□□□ 0.98
SNX11Q9Y5W9 HMBS-201ENST00000278715 1501 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
SNX11Q9Y5W9 CNPY3-201ENST00000372836 1704 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
SNX11Q9Y5W9 SPINT2-201ENST00000301244 1802 ntAPPRIS P2 TSL 1 (best) BASIC21.18■□□□□ 0.98
SNX11Q9Y5W9 AC079834.2-201ENST00000609776 1949 ntBASIC21.17■□□□□ 0.98
SNX11Q9Y5W9 SMAD1-201ENST00000302085 1966 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Retrieved 100 of 98,524 protein–RNA pairs in 23.3 ms