Protein–RNA interactions for Protein: Q9Y5I7

CLDN16, Claudin-16, humanhuman

Predictions only

Length 305 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN16Q9Y5I7 GP9-201ENST00000307395 889 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
CLDN16Q9Y5I7 FDX2-202ENST00000393708 1012 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
CLDN16Q9Y5I7 FNDC3B-204ENST00000421757 946 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
CLDN16Q9Y5I7 CALM1-202ENST00000447653 1104 ntAPPRIS ALT1 TSL 2 BASIC20.02■□□□□ 0.8
CLDN16Q9Y5I7 AC092468.1-201ENST00000491321 562 ntTSL 4 BASIC20.02■□□□□ 0.8
CLDN16Q9Y5I7 ATOX1-207ENST00000524142 749 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.8
CLDN16Q9Y5I7 AP001160.5-201ENST00000636508 485 ntAPPRIS P1 BASIC20.02■□□□□ 0.8
CLDN16Q9Y5I7 ACSL1-205ENST00000504900 1583 ntTSL 5 BASIC20.02■□□□□ 0.8
CLDN16Q9Y5I7 SYNGR2-203ENST00000588282 1553 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
CLDN16Q9Y5I7 ZMYND11-210ENST00000403354 1664 ntTSL 5 BASIC20.02■□□□□ 0.8
CLDN16Q9Y5I7 PIP5KL1-202ENST00000388747 2198 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.8
CLDN16Q9Y5I7 RUNX2-210ENST00000576263 2256 ntTSL 5 BASIC20.01■□□□□ 0.79
CLDN16Q9Y5I7 ACAA1-202ENST00000333167 1785 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
CLDN16Q9Y5I7 RAB28-208ENST00000630951 1679 ntTSL 5 BASIC20.01■□□□□ 0.79
CLDN16Q9Y5I7 AP004607.4-201ENST00000530158 1459 ntBASIC20.01■□□□□ 0.79
CLDN16Q9Y5I7 SPATA2L-201ENST00000289805 2335 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
CLDN16Q9Y5I7 CERKL-204ENST00000374970 1392 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
CLDN16Q9Y5I7 TCTEX1D4-201ENST00000339355 763 ntAPPRIS P1 BASIC20.01■□□□□ 0.79
CLDN16Q9Y5I7 RASGRP2-203ENST00000377486 667 ntTSL 3 BASIC20.01■□□□□ 0.79
CLDN16Q9Y5I7 LINC01678-201ENST00000411694 863 ntTSL 5 BASIC20.01■□□□□ 0.79
CLDN16Q9Y5I7 KRT18P5-201ENST00000436075 1291 ntBASIC20.01■□□□□ 0.79
CLDN16Q9Y5I7 YJEFN3-203ENST00000514277 995 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
CLDN16Q9Y5I7 SOAT2-201ENST00000301466 2044 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
CLDN16Q9Y5I7 ARL2-SNX15-201ENST00000301886 2392 ntAPPRIS P1 TSL 2 BASIC20.01■□□□□ 0.79
CLDN16Q9Y5I7 MME-202ENST00000382989 1319 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
CLDN16Q9Y5I7 CCZ1B-201ENST00000316731 2885 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
CLDN16Q9Y5I7 RBBP7-202ENST00000380084 2036 ntTSL 2 BASIC20■□□□□ 0.79
CLDN16Q9Y5I7 HLA-C-203ENST00000383329 1554 ntAPPRIS ALT2 BASIC20■□□□□ 0.79
CLDN16Q9Y5I7 PLK5-202ENST00000454744 1930 ntAPPRIS P2 TSL 2 BASIC20■□□□□ 0.79
CLDN16Q9Y5I7 NARF-202ENST00000345415 1487 ntTSL 1 (best) BASIC20■□□□□ 0.79
CLDN16Q9Y5I7 DNAJC25-201ENST00000313525 2268 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
CLDN16Q9Y5I7 SPAST-204ENST00000621856 1715 ntTSL 1 (best) BASIC20■□□□□ 0.79
CLDN16Q9Y5I7 JSRP1-201ENST00000300961 1138 ntAPPRIS P1 TSL 2 BASIC20■□□□□ 0.79
CLDN16Q9Y5I7 C5orf38-201ENST00000334000 890 ntAPPRIS P3 TSL 1 (best) BASIC20■□□□□ 0.79
CLDN16Q9Y5I7 PCMT1-201ENST00000367378 1293 ntAPPRIS P3 TSL 1 (best) BASIC20■□□□□ 0.79
CLDN16Q9Y5I7 TSPAN2-201ENST00000369515 793 ntTSL 3 BASIC20■□□□□ 0.79
CLDN16Q9Y5I7 TMEM54-202ENST00000373463 999 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
CLDN16Q9Y5I7 NDUFB2-207ENST00000465506 1101 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
CLDN16Q9Y5I7 Z97653.1-201ENST00000567096 446 ntTSL 3 BASIC20■□□□□ 0.79
CLDN16Q9Y5I7 PRMT1-221ENST00000610806 1192 ntTSL 3 BASIC20■□□□□ 0.79
CLDN16Q9Y5I7 H2AFB3-201ENST00000615853 591 ntAPPRIS P1 BASIC20■□□□□ 0.79
CLDN16Q9Y5I7 TNFRSF11A-207ENST00000639222 855 ntAPPRIS ALT2 TSL 5 BASIC20■□□□□ 0.79
CLDN16Q9Y5I7 PLPP5-203ENST00000424479 2130 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
CLDN16Q9Y5I7 CITED2-202ENST00000536159 1797 ntAPPRIS P1 TSL 3 BASIC20■□□□□ 0.79
CLDN16Q9Y5I7 CITED2-203ENST00000537332 1780 ntTSL 3 BASIC20■□□□□ 0.79
CLDN16Q9Y5I7 AC003102.1-202ENST00000563394 1796 ntBASIC20■□□□□ 0.79
CLDN16Q9Y5I7 AC079328.2-202ENST00000560903 1410 ntTSL 1 (best) BASIC20■□□□□ 0.79
CLDN16Q9Y5I7 FRAT1-201ENST00000371021 2649 ntAPPRIS P1 BASIC20■□□□□ 0.79
CLDN16Q9Y5I7 CEBPB-AS1-201ENST00000613921 2648 ntTSL 3 BASIC20■□□□□ 0.79
CLDN16Q9Y5I7 CHST7-201ENST00000276055 2289 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
CLDN16Q9Y5I7 ASRGL1-202ENST00000415229 2270 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
CLDN16Q9Y5I7 RAB1A-202ENST00000409751 1333 ntTSL 5 BASIC20■□□□□ 0.79
CLDN16Q9Y5I7 MFSD14C-208ENST00000637864 1802 ntAPPRIS ALT2 TSL 2 BASIC19.99■□□□□ 0.79
CLDN16Q9Y5I7 SPIRE1-203ENST00000410092 5533 ntAPPRIS P3 TSL 1 (best) BASIC19.99■□□□□ 0.79
CLDN16Q9Y5I7 GCH1-202ENST00000395514 1977 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
CLDN16Q9Y5I7 TSSK1B-201ENST00000390666 2478 ntAPPRIS P1 BASIC19.99■□□□□ 0.79
CLDN16Q9Y5I7 UCK2-201ENST00000367879 1375 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
CLDN16Q9Y5I7 GRAMD1A-201ENST00000317991 2695 ntAPPRIS P3 TSL 1 (best) BASIC19.99■□□□□ 0.79
CLDN16Q9Y5I7 NRL-201ENST00000396995 810 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
CLDN16Q9Y5I7 SPOCK2-203ENST00000412663 1284 ntTSL 5 BASIC19.99■□□□□ 0.79
CLDN16Q9Y5I7 GABARAPL2-205ENST00000568455 646 ntTSL 3 BASIC19.99■□□□□ 0.79
CLDN16Q9Y5I7 MIF4GD-211ENST00000580571 952 ntTSL 2 BASIC19.99■□□□□ 0.79
CLDN16Q9Y5I7 NEDD4L-225ENST00000589054 1033 ntTSL 3 BASIC19.99■□□□□ 0.79
CLDN16Q9Y5I7 AC004854.2-201ENST00000608450 1441 ntBASIC19.99■□□□□ 0.79
CLDN16Q9Y5I7 HLA-DPB1-211ENST00000418931 1560 ntAPPRIS P2 BASIC19.99■□□□□ 0.79
CLDN16Q9Y5I7 NAA35-202ENST00000376040 1797 ntTSL 2 BASIC19.98■□□□□ 0.79
CLDN16Q9Y5I7 NRXN1-205ENST00000401710 2873 ntTSL 5 BASIC19.98■□□□□ 0.79
CLDN16Q9Y5I7 BRWD1-202ENST00000341322 2495 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
CLDN16Q9Y5I7 MCMBP-202ENST00000369077 2465 ntAPPRIS ALT1 TSL 1 (best) BASIC19.98■□□□□ 0.79
CLDN16Q9Y5I7 CAPN12-212ENST00000601953 2381 ntTSL 5 BASIC19.98■□□□□ 0.79
CLDN16Q9Y5I7 C11orf96-202ENST00000528572 1834 ntBASIC19.98■□□□□ 0.79
CLDN16Q9Y5I7 AC019068.1-201ENST00000415226 552 ntTSL 4 BASIC19.98■□□□□ 0.79
CLDN16Q9Y5I7 AP002748.1-201ENST00000504911 580 ntTSL 3 BASIC19.98■□□□□ 0.79
CLDN16Q9Y5I7 AC079140.4-201ENST00000507448 529 ntBASIC19.98■□□□□ 0.79
CLDN16Q9Y5I7 AC108002.2-201ENST00000519782 340 ntTSL 4 BASIC19.98■□□□□ 0.79
CLDN16Q9Y5I7 SERTAD3-201ENST00000322354 1734 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
CLDN16Q9Y5I7 GATA1-202ENST00000376670 1497 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
CLDN16Q9Y5I7 SPN-202ENST00000395389 1935 ntAPPRIS P2 TSL 1 (best) BASIC19.98■□□□□ 0.79
CLDN16Q9Y5I7 AC010542.4-201ENST00000563151 1910 ntBASIC19.98■□□□□ 0.79
CLDN16Q9Y5I7 RHBDD2-201ENST00000006777 1802 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
CLDN16Q9Y5I7 IFNGR2-203ENST00000405436 1684 ntTSL 5 BASIC19.97■□□□□ 0.79
CLDN16Q9Y5I7 MFF-207ENST00000409565 1548 ntTSL 2 BASIC19.97■□□□□ 0.79
CLDN16Q9Y5I7 SHMT1-201ENST00000316694 2464 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
CLDN16Q9Y5I7 GCH1-206ENST00000543643 1897 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
CLDN16Q9Y5I7 MYB-221ENST00000527615 2381 ntTSL 5 BASIC19.97■□□□□ 0.79
CLDN16Q9Y5I7 DISC1-205ENST00000366636 2224 ntAPPRIS P4 TSL 1 (best) BASIC19.97■□□□□ 0.79
CLDN16Q9Y5I7 SLC25A29-202ENST00000392908 2242 ntTSL 2 BASIC19.97■□□□□ 0.79
CLDN16Q9Y5I7 UCN-201ENST00000296099 795 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
CLDN16Q9Y5I7 HBM-201ENST00000356815 506 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
CLDN16Q9Y5I7 ATPIF1-204ENST00000497986 599 ntTSL 2 BASIC19.97■□□□□ 0.79
CLDN16Q9Y5I7 TPT1-AS1-211ENST00000520622 604 ntTSL 4 BASIC19.97■□□□□ 0.79
CLDN16Q9Y5I7 NTF6G-201ENST00000591094 616 ntBASIC19.97■□□□□ 0.79
CLDN16Q9Y5I7 AL512625.3-202ENST00000591993 1091 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
CLDN16Q9Y5I7 MAGIX-207ENST00000615915 1757 ntAPPRIS ALT2 TSL 2 BASIC19.97■□□□□ 0.79
CLDN16Q9Y5I7 DTNB-201ENST00000288642 2464 ntAPPRIS ALT2 TSL 2 BASIC19.97■□□□□ 0.79
CLDN16Q9Y5I7 DTNB-208ENST00000406818 2474 ntAPPRIS P4 TSL 1 (best) BASIC19.97■□□□□ 0.79
CLDN16Q9Y5I7 C16orf58-209ENST00000567994 1845 ntTSL 5 BASIC19.97■□□□□ 0.79
CLDN16Q9Y5I7 P4HA2-202ENST00000360568 2313 ntAPPRIS ALT1 TSL 1 (best) BASIC19.97■□□□□ 0.79
CLDN16Q9Y5I7 FDFT1-201ENST00000220584 2176 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
CLDN16Q9Y5I7 CHRAC1-203ENST00000519533 1678 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 28.9 ms