Protein–RNA interactions for Protein: Q9Y5B0

CTDP1, RNA polymerase II subunit A C-terminal domain phosphatase, humanhuman

Predicted RBP Predictions only

Length 961 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTDP1Q9Y5B0 PCYT2-201ENST00000331285 2147 ntTSL 2 BASIC24.74■■□□□ 1.55
CTDP1Q9Y5B0 MAPK9-206ENST00000425491 2266 ntTSL 5 BASIC24.74■■□□□ 1.55
CTDP1Q9Y5B0 KANSL1-AS1-201ENST00000398275 517 ntTSL 1 (best) BASIC24.74■■□□□ 1.55
CTDP1Q9Y5B0 AL645608.9-201ENST00000442292 829 ntTSL 1 (best) BASIC24.74■■□□□ 1.55
CTDP1Q9Y5B0 TRAPPC3-208ENST00000616074 1114 ntTSL 5 BASIC24.74■■□□□ 1.55
CTDP1Q9Y5B0 SLC22A31-201ENST00000562855 1909 ntAPPRIS P1 TSL 5 BASIC24.74■■□□□ 1.55
CTDP1Q9Y5B0 DUSP9-202ENST00000370167 2289 ntAPPRIS P1 TSL 1 (best) BASIC24.74■■□□□ 1.55
CTDP1Q9Y5B0 TMEM44-202ENST00000347147 2245 ntAPPRIS P1 TSL 1 (best) BASIC24.73■■□□□ 1.55
CTDP1Q9Y5B0 TANGO2-210ENST00000432883 2084 ntTSL 2 BASIC24.73■■□□□ 1.55
CTDP1Q9Y5B0 DENND4B-201ENST00000361217 5706 ntAPPRIS P2 TSL 1 (best) BASIC24.73■■□□□ 1.55
CTDP1Q9Y5B0 TOX2-201ENST00000341197 1880 ntAPPRIS P1 TSL 2 BASIC24.73■■□□□ 1.55
CTDP1Q9Y5B0 LYRM9-201ENST00000379102 501 ntAPPRIS P1 TSL 2 BASIC24.73■■□□□ 1.55
CTDP1Q9Y5B0 MIR663A-201ENST00000385250 93 ntBASIC24.73■■□□□ 1.55
CTDP1Q9Y5B0 CMTM8-202ENST00000458535 996 ntTSL 1 (best) BASIC24.73■■□□□ 1.55
CTDP1Q9Y5B0 LYRM9-206ENST00000508862 807 ntTSL 3 BASIC24.73■■□□□ 1.55
CTDP1Q9Y5B0 CACNG8-201ENST00000270458 8747 ntAPPRIS ALT2 TSL 1 (best) BASIC24.73■■□□□ 1.55
CTDP1Q9Y5B0 KLC1-201ENST00000246489 2294 ntAPPRIS P1 TSL 5 BASIC24.73■■□□□ 1.55
CTDP1Q9Y5B0 KLC1-224ENST00000557450 2265 ntTSL 5 BASIC24.73■■□□□ 1.55
CTDP1Q9Y5B0 GCA-201ENST00000233612 1694 ntTSL 2 BASIC24.72■■□□□ 1.55
CTDP1Q9Y5B0 FDX2-202ENST00000393708 1012 ntAPPRIS P1 TSL 1 (best) BASIC24.72■■□□□ 1.55
CTDP1Q9Y5B0 CROCCP5-201ENST00000436658 830 ntBASIC24.72■■□□□ 1.55
CTDP1Q9Y5B0 ABCC6P2-202ENST00000542005 706 ntTSL 1 (best) BASIC24.72■■□□□ 1.55
CTDP1Q9Y5B0 NMRAL1-212ENST00000574425 1240 ntAPPRIS P1 TSL 2 BASIC24.72■■□□□ 1.55
CTDP1Q9Y5B0 ABCC6-204ENST00000575728 714 ntTSL 1 (best) BASIC24.72■■□□□ 1.55
CTDP1Q9Y5B0 MAGI2-212ENST00000626691 4599 ntTSL 5 BASIC24.72■■□□□ 1.55
CTDP1Q9Y5B0 LTBP3-201ENST00000301873 4443 ntAPPRIS ALT2 TSL 2 BASIC24.72■■□□□ 1.55
CTDP1Q9Y5B0 USP25-202ENST00000285681 5216 ntTSL 1 (best) BASIC24.72■■□□□ 1.55
CTDP1Q9Y5B0 GIT1-210ENST00000579937 2798 ntTSL 2 BASIC24.72■■□□□ 1.55
CTDP1Q9Y5B0 KDF1-201ENST00000320567 1793 ntAPPRIS P1 TSL 2 BASIC24.72■■□□□ 1.55
CTDP1Q9Y5B0 KHSRP-201ENST00000398148 2993 ntAPPRIS P2 TSL 1 (best) BASIC24.72■■□□□ 1.55
CTDP1Q9Y5B0 TPM1-204ENST00000334895 1637 ntTSL 1 (best) BASIC24.72■■□□□ 1.55
CTDP1Q9Y5B0 ZFAND4-205ENST00000374371 2283 ntTSL 5 BASIC24.72■■□□□ 1.55
CTDP1Q9Y5B0 PTH1R-201ENST00000313049 2123 ntAPPRIS P1 TSL 1 (best) BASIC24.71■■□□□ 1.55
CTDP1Q9Y5B0 TNFRSF18-201ENST00000328596 851 ntAPPRIS P4 TSL 1 (best) BASIC24.71■■□□□ 1.55
CTDP1Q9Y5B0 EFCAB6-202ENST00000356087 1129 ntTSL 5 BASIC24.71■■□□□ 1.55
CTDP1Q9Y5B0 AC044860.1-203ENST00000560811 844 ntTSL 3 BASIC24.71■■□□□ 1.55
CTDP1Q9Y5B0 MYCNOS-205ENST00000641950 531 ntBASIC24.71■■□□□ 1.55
CTDP1Q9Y5B0 RAB28-203ENST00000338176 1787 ntTSL 3 BASIC24.71■■□□□ 1.55
CTDP1Q9Y5B0 PACRGL-227ENST00000513459 1773 ntTSL 5 BASIC24.71■■□□□ 1.55
CTDP1Q9Y5B0 QPCT-201ENST00000338415 1739 ntAPPRIS P1 TSL 1 (best) BASIC24.71■■□□□ 1.55
CTDP1Q9Y5B0 GNB2-201ENST00000303210 1878 ntAPPRIS P1 TSL 1 (best) BASIC24.7■■□□□ 1.55
CTDP1Q9Y5B0 PCDH1-204ENST00000503492 2373 ntTSL 5 BASIC24.7■■□□□ 1.54
CTDP1Q9Y5B0 NT5C-201ENST00000245552 954 ntAPPRIS P1 TSL 1 (best) BASIC24.7■■□□□ 1.54
CTDP1Q9Y5B0 PGPEP1L-201ENST00000378919 995 ntTSL 1 (best) BASIC24.7■■□□□ 1.54
CTDP1Q9Y5B0 PIGP-203ENST00000399098 972 ntTSL 1 (best) BASIC24.7■■□□□ 1.54
CTDP1Q9Y5B0 TRNT1-207ENST00000420393 854 ntTSL 3 BASIC24.7■■□□□ 1.54
CTDP1Q9Y5B0 AC007322.1-201ENST00000426983 750 ntBASIC24.7■■□□□ 1.54
CTDP1Q9Y5B0 AC005789.1-201ENST00000585411 297 ntTSL 3 BASIC24.7■■□□□ 1.54
CTDP1Q9Y5B0 ZNF561-AS1-205ENST00000588765 579 ntTSL 4 BASIC24.7■■□□□ 1.54
CTDP1Q9Y5B0 AL109923.1-201ENST00000618799 583 ntBASIC24.7■■□□□ 1.54
CTDP1Q9Y5B0 AC231657.2-201ENST00000624556 255 ntBASIC24.7■■□□□ 1.54
CTDP1Q9Y5B0 TRH-201ENST00000302649 1978 ntAPPRIS P2 TSL 1 (best) BASIC24.7■■□□□ 1.54
CTDP1Q9Y5B0 NFE2L3P1-201ENST00000588207 1959 ntBASIC24.7■■□□□ 1.54
CTDP1Q9Y5B0 SOX1-201ENST00000330949 2842 ntAPPRIS P1 BASIC24.7■■□□□ 1.54
CTDP1Q9Y5B0 SNX10-207ENST00000446848 2613 ntAPPRIS P2 TSL 1 (best) BASIC24.69■■□□□ 1.54
CTDP1Q9Y5B0 GPR6-202ENST00000414000 1945 ntTSL 2 BASIC24.69■■□□□ 1.54
CTDP1Q9Y5B0 FJX1-201ENST00000317811 2450 ntAPPRIS P1 BASIC24.69■■□□□ 1.54
CTDP1Q9Y5B0 HORMAD2-201ENST00000336726 2187 ntAPPRIS P1 TSL 1 (best) BASIC24.69■■□□□ 1.54
CTDP1Q9Y5B0 HMX1-202ENST00000506970 651 ntTSL 1 (best) BASIC24.69■■□□□ 1.54
CTDP1Q9Y5B0 AC037459.4-201ENST00000517384 585 ntTSL 4 BASIC24.69■■□□□ 1.54
CTDP1Q9Y5B0 AC138907.5-202ENST00000569484 235 ntBASIC24.69■■□□□ 1.54
CTDP1Q9Y5B0 ARFRP1-202ENST00000607873 1061 ntTSL 2 BASIC24.69■■□□□ 1.54
CTDP1Q9Y5B0 ADA-201ENST00000372874 1539 ntAPPRIS P1 TSL 1 (best) BASIC24.69■■□□□ 1.54
CTDP1Q9Y5B0 OLIG1-201ENST00000382348 2277 ntAPPRIS P1 BASIC24.69■■□□□ 1.54
CTDP1Q9Y5B0 PTPN13-205ENST00000502971 1708 ntTSL 1 (best) BASIC24.69■■□□□ 1.54
CTDP1Q9Y5B0 KLHL36-201ENST00000258157 1974 ntTSL 1 (best) BASIC24.69■■□□□ 1.54
CTDP1Q9Y5B0 WRAP73-201ENST00000270708 1665 ntAPPRIS P1 TSL 1 (best) BASIC24.69■■□□□ 1.54
CTDP1Q9Y5B0 DYRK3-203ENST00000367109 2163 ntAPPRIS P1 TSL 1 (best) BASIC24.69■■□□□ 1.54
CTDP1Q9Y5B0 ASPSCR1-202ENST00000306739 1843 ntAPPRIS P3 TSL 1 (best) BASIC24.68■■□□□ 1.54
CTDP1Q9Y5B0 ADRM1-204ENST00000491935 1530 ntAPPRIS P1 TSL 5 BASIC24.68■■□□□ 1.54
CTDP1Q9Y5B0 AP006587.3-201ENST00000525742 1516 ntBASIC24.68■■□□□ 1.54
CTDP1Q9Y5B0 ERF-201ENST00000222329 2698 ntAPPRIS P1 TSL 1 (best) BASIC24.68■■□□□ 1.54
CTDP1Q9Y5B0 CEACAM4-201ENST00000221954 1205 ntAPPRIS P2 TSL 1 (best) BASIC24.68■■□□□ 1.54
CTDP1Q9Y5B0 HRASLS5-201ENST00000301790 1166 ntAPPRIS P3 TSL 1 (best) BASIC24.68■■□□□ 1.54
CTDP1Q9Y5B0 LINC01816-201ENST00000414141 662 ntTSL 1 (best) BASIC24.68■■□□□ 1.54
CTDP1Q9Y5B0 MAP2K4P1-201ENST00000438453 1195 ntBASIC24.68■■□□□ 1.54
CTDP1Q9Y5B0 AC010141.2-201ENST00000452426 721 ntBASIC24.68■■□□□ 1.54
CTDP1Q9Y5B0 BRI3-207ENST00000539286 699 ntTSL 2 BASIC24.68■■□□□ 1.54
CTDP1Q9Y5B0 C12orf43-208ENST00000539736 1033 ntAPPRIS ALT2 TSL 2 BASIC24.68■■□□□ 1.54
CTDP1Q9Y5B0 MVB12A-212ENST00000543795 1154 ntAPPRIS P1 TSL 5 BASIC24.68■■□□□ 1.54
CTDP1Q9Y5B0 HERC2P5-204ENST00000569697 1214 ntTSL 2 BASIC24.68■■□□□ 1.54
CTDP1Q9Y5B0 CEACAM4-203ENST00000600925 899 ntAPPRIS ALT2 TSL 2 BASIC24.68■■□□□ 1.54
CTDP1Q9Y5B0 WT1-AS_3.1-201ENST00000613262 234 ntBASIC24.68■■□□□ 1.54
CTDP1Q9Y5B0 IFNGR2-203ENST00000405436 1684 ntTSL 5 BASIC24.68■■□□□ 1.54
CTDP1Q9Y5B0 DLL3-201ENST00000205143 2332 ntTSL 1 (best) BASIC24.68■■□□□ 1.54
CTDP1Q9Y5B0 AKR7A2-201ENST00000235835 1362 ntAPPRIS P1 TSL 1 (best) BASIC24.67■■□□□ 1.54
CTDP1Q9Y5B0 SUMF1-201ENST00000272902 2159 ntAPPRIS P1 TSL 1 (best) BASIC24.67■■□□□ 1.54
CTDP1Q9Y5B0 NHLH1-201ENST00000302101 2563 ntAPPRIS P1 TSL 1 (best) BASIC24.67■■□□□ 1.54
CTDP1Q9Y5B0 CERKL-203ENST00000374969 1330 ntTSL 1 (best) BASIC24.67■■□□□ 1.54
CTDP1Q9Y5B0 HSF4-215ENST00000521374 1515 ntAPPRIS P1 TSL 1 (best) BASIC24.67■■□□□ 1.54
CTDP1Q9Y5B0 TULP1-202ENST00000322263 1941 ntTSL 1 (best) BASIC24.67■■□□□ 1.54
CTDP1Q9Y5B0 AC137767.1-201ENST00000602918 1920 ntBASIC24.67■■□□□ 1.54
CTDP1Q9Y5B0 GRM6-201ENST00000231188 6143 ntAPPRIS P1 TSL 2 BASIC24.67■■□□□ 1.54
CTDP1Q9Y5B0 PLEKHG4-201ENST00000360461 6782 ntAPPRIS P3 TSL 2 BASIC24.67■■□□□ 1.54
CTDP1Q9Y5B0 MOB2-201ENST00000329957 1207 ntAPPRIS P1 TSL 2 BASIC24.67■■□□□ 1.54
CTDP1Q9Y5B0 C19orf73-201ENST00000408991 744 ntAPPRIS P1 BASIC24.67■■□□□ 1.54
CTDP1Q9Y5B0 ZPBP-201ENST00000046087 1213 ntAPPRIS P3 TSL 1 (best) BASIC24.67■■□□□ 1.54
CTDP1Q9Y5B0 ZNF696-204ENST00000520333 605 ntTSL 5 BASIC24.67■■□□□ 1.54
CTDP1Q9Y5B0 HTATIP2-208ENST00000532505 595 ntTSL 2 BASIC24.67■■□□□ 1.54
CTDP1Q9Y5B0 AC104771.1-201ENST00000603335 964 ntBASIC24.67■■□□□ 1.54
Retrieved 100 of 98,524 protein–RNA pairs in 66.7 ms