Protein–RNA interactions for Protein: Q9Y3C5

RNF11, RING finger protein 11, humanhuman

Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF11Q9Y3C5 ORAI3-201ENST00000318663 2206 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
RNF11Q9Y3C5 SPTBN4-203ENST00000392023 2419 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
RNF11Q9Y3C5 ACHE-203ENST00000411582 2179 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
RNF11Q9Y3C5 P2RY2-203ENST00000393597 2107 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
RNF11Q9Y3C5 AC026471.6-201ENST00000622954 1905 ntBASIC20.84■□□□□ 0.93
RNF11Q9Y3C5 OXCT2P1-201ENST00000447263 1535 ntBASIC20.84■□□□□ 0.93
RNF11Q9Y3C5 ARRB2-201ENST00000269260 1895 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
RNF11Q9Y3C5 CACNA1H-210ENST00000638323 8048 ntAPPRIS ALT2 TSL 5 BASIC20.84■□□□□ 0.93
RNF11Q9Y3C5 PTMA-205ENST00000410064 814 ntTSL 2 BASIC20.84■□□□□ 0.93
RNF11Q9Y3C5 ST3GAL4-201ENST00000227495 1790 ntAPPRIS P3 TSL 5 BASIC20.84■□□□□ 0.93
RNF11Q9Y3C5 TMEM44-204ENST00000392432 2490 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
RNF11Q9Y3C5 ZNF707-201ENST00000358656 2183 ntAPPRIS P1 TSL 2 BASIC20.83■□□□□ 0.93
RNF11Q9Y3C5 SOX17-201ENST00000297316 2342 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
RNF11Q9Y3C5 C19orf12-201ENST00000323670 2464 ntAPPRIS P1 TSL 2 BASIC20.83■□□□□ 0.93
RNF11Q9Y3C5 E4F1-204ENST00000564139 2493 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
RNF11Q9Y3C5 IRX4-207ENST00000613726 2403 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
RNF11Q9Y3C5 TPCN2-209ENST00000637504 2736 ntTSL 5 BASIC20.83■□□□□ 0.93
RNF11Q9Y3C5 UNC93B3-201ENST00000308076 687 ntBASIC20.83■□□□□ 0.93
RNF11Q9Y3C5 PABPC1L2A-201ENST00000373519 2237 ntAPPRIS P1 BASIC20.83■□□□□ 0.93
RNF11Q9Y3C5 PHLDB2-210ENST00000478922 1861 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
RNF11Q9Y3C5 SOX21-201ENST00000376945 2778 ntAPPRIS P1 BASIC20.83■□□□□ 0.92
RNF11Q9Y3C5 KRT18P55-201ENST00000577198 1950 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
RNF11Q9Y3C5 P4HTM-202ENST00000383729 2127 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
RNF11Q9Y3C5 SH2B2-202ENST00000536178 2113 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
RNF11Q9Y3C5 PARD3-202ENST00000346874 5894 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.92
RNF11Q9Y3C5 PARD3-203ENST00000350537 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.92
RNF11Q9Y3C5 NABP2-203ENST00000380198 1775 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
RNF11Q9Y3C5 SPHK1-202ENST00000392496 1779 ntAPPRIS P3 TSL 1 (best) BASIC20.82■□□□□ 0.92
RNF11Q9Y3C5 RHBDL3-204ENST00000538145 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
RNF11Q9Y3C5 ESR2-204ENST00000353772 2454 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
RNF11Q9Y3C5 DTWD2-203ENST00000510708 2307 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
RNF11Q9Y3C5 GOLGA2P6-201ENST00000340929 2049 ntBASIC20.82■□□□□ 0.92
RNF11Q9Y3C5 SNX3-202ENST00000349379 890 ntTSL 2 BASIC20.82■□□□□ 0.92
RNF11Q9Y3C5 TYROBP-203ENST00000544690 522 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
RNF11Q9Y3C5 C15orf61-202ENST00000557807 769 ntTSL 2 BASIC20.82■□□□□ 0.92
RNF11Q9Y3C5 LINC01011-201ENST00000445000 2811 ntTSL 2 BASIC20.82■□□□□ 0.92
RNF11Q9Y3C5 TMEM121-202ENST00000431372 1519 ntAPPRIS P1 TSL 5 BASIC20.82■□□□□ 0.92
RNF11Q9Y3C5 CENPH-201ENST00000283006 1389 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
RNF11Q9Y3C5 EPDR1-201ENST00000199448 2599 ntAPPRIS P3 TSL 1 (best) BASIC20.82■□□□□ 0.92
RNF11Q9Y3C5 HTATIP2-201ENST00000419348 1477 ntTSL 2 BASIC20.81■□□□□ 0.92
RNF11Q9Y3C5 DTNBP1-201ENST00000338950 1880 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
RNF11Q9Y3C5 DUSP9-202ENST00000370167 2289 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
RNF11Q9Y3C5 ITGBL1-206ENST00000618057 2368 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
RNF11Q9Y3C5 TFG-201ENST00000240851 1978 ntAPPRIS P3 TSL 1 (best) BASIC20.81■□□□□ 0.92
RNF11Q9Y3C5 B4GAT1-201ENST00000311181 2072 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
RNF11Q9Y3C5 NUTF2-201ENST00000219169 2321 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
RNF11Q9Y3C5 SMUG1-215ENST00000508394 1697 ntAPPRIS P1 TSL 2 BASIC20.81■□□□□ 0.92
RNF11Q9Y3C5 TMEM5-201ENST00000261234 1918 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
RNF11Q9Y3C5 KRTAP5-1-201ENST00000382171 942 ntAPPRIS P1 BASIC20.81■□□□□ 0.92
RNF11Q9Y3C5 AP005435.1-201ENST00000529293 1178 ntBASIC20.81■□□□□ 0.92
RNF11Q9Y3C5 RAB6A-204ENST00000536566 1267 ntTSL 5 BASIC20.81■□□□□ 0.92
RNF11Q9Y3C5 SLC1A5-203ENST00000542575 2882 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
RNF11Q9Y3C5 POTEC-204ENST00000620346 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
RNF11Q9Y3C5 BASP1-203ENST00000616743 1711 ntAPPRIS P1 TSL 3 BASIC20.81■□□□□ 0.92
RNF11Q9Y3C5 CAV2-201ENST00000222693 3301 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
RNF11Q9Y3C5 AC084757.3-201ENST00000558061 1943 ntTSL 3 BASIC20.8■□□□□ 0.92
RNF11Q9Y3C5 TANGO2-202ENST00000398042 2011 ntTSL 2 BASIC20.8■□□□□ 0.92
RNF11Q9Y3C5 EPN1-201ENST00000085079 2355 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
RNF11Q9Y3C5 KLF9-201ENST00000377126 5175 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
RNF11Q9Y3C5 NEURL4-202ENST00000399464 5200 ntAPPRIS P4 TSL 1 (best) BASIC20.8■□□□□ 0.92
RNF11Q9Y3C5 DNPH1-201ENST00000230431 657 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
RNF11Q9Y3C5 SERTAD4-AS1-202ENST00000475406 591 ntTSL 2 BASIC20.8■□□□□ 0.92
RNF11Q9Y3C5 MIR4767-201ENST00000582827 78 ntBASIC20.8■□□□□ 0.92
RNF11Q9Y3C5 PRR16-202ENST00000407149 1747 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
RNF11Q9Y3C5 ZNF688-201ENST00000223459 2506 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
RNF11Q9Y3C5 WNT10A-201ENST00000258411 2547 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
RNF11Q9Y3C5 PPP2R5E-204ENST00000555899 2164 ntAPPRIS ALT1 TSL 1 (best) BASIC20.8■□□□□ 0.92
RNF11Q9Y3C5 CIZ1-206ENST00000372954 2731 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
RNF11Q9Y3C5 FAM72B-202ENST00000369390 2396 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
RNF11Q9Y3C5 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC20.79■□□□□ 0.92
RNF11Q9Y3C5 NRXN1-202ENST00000342183 3315 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
RNF11Q9Y3C5 LYPD2-201ENST00000359228 594 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
RNF11Q9Y3C5 SERGEF-219ENST00000532265 1124 ntTSL 2 BASIC20.79■□□□□ 0.92
RNF11Q9Y3C5 AC024257.2-201ENST00000549699 147 ntBASIC20.79■□□□□ 0.92
RNF11Q9Y3C5 ZNF584-205ENST00000596281 575 ntTSL 2 BASIC20.79■□□□□ 0.92
RNF11Q9Y3C5 FBXO25-202ENST00000350302 2229 ntAPPRIS ALT1 TSL 1 (best) BASIC20.79■□□□□ 0.92
RNF11Q9Y3C5 TRIM14-202ENST00000342043 1479 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
RNF11Q9Y3C5 SMIM19-203ENST00000417410 1466 ntAPPRIS P1 TSL 2 BASIC20.79■□□□□ 0.92
RNF11Q9Y3C5 CTU2-202ENST00000453996 1751 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
RNF11Q9Y3C5 ARHGEF4-202ENST00000355771 1872 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
RNF11Q9Y3C5 LAYN-201ENST00000375614 2066 ntAPPRIS P3 TSL 1 (best) BASIC20.79■□□□□ 0.92
RNF11Q9Y3C5 DOK3-201ENST00000312943 2292 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
RNF11Q9Y3C5 PARD3-213ENST00000545260 5740 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
RNF11Q9Y3C5 ATG4D-201ENST00000309469 1949 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
RNF11Q9Y3C5 COL8A2-203ENST00000481785 2036 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
RNF11Q9Y3C5 GPSM1-201ENST00000291775 2114 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
RNF11Q9Y3C5 ZNF584-201ENST00000306910 2332 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
RNF11Q9Y3C5 DACT1-204ENST00000541264 2610 ntAPPRIS ALT2 TSL 2 BASIC20.78■□□□□ 0.92
RNF11Q9Y3C5 LRRC4B-201ENST00000389201 2958 ntAPPRIS P1 TSL 2 BASIC20.78■□□□□ 0.92
RNF11Q9Y3C5 AC244015.2-201ENST00000616358 1861 ntBASIC20.78■□□□□ 0.92
RNF11Q9Y3C5 CITED2-202ENST00000536159 1797 ntAPPRIS P1 TSL 3 BASIC20.78■□□□□ 0.92
RNF11Q9Y3C5 CITED2-203ENST00000537332 1780 ntTSL 3 BASIC20.78■□□□□ 0.92
RNF11Q9Y3C5 MMP24-201ENST00000246186 4414 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
RNF11Q9Y3C5 RTL8C-201ENST00000257013 1181 ntAPPRIS P1 BASIC20.78■□□□□ 0.92
RNF11Q9Y3C5 NAA38-201ENST00000333775 999 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
RNF11Q9Y3C5 ZNF32-202ENST00000395797 1201 ntAPPRIS P1 TSL 2 BASIC20.78■□□□□ 0.92
RNF11Q9Y3C5 TOLLIP-208ENST00000527938 549 ntTSL 4 BASIC20.78■□□□□ 0.92
RNF11Q9Y3C5 NRIP3-203ENST00000531090 980 ntTSL 2 BASIC20.78■□□□□ 0.92
RNF11Q9Y3C5 AL136162.1-201ENST00000607711 1078 ntBASIC20.78■□□□□ 0.92
RNF11Q9Y3C5 PBX4-201ENST00000251203 1724 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 16.4 ms