Protein–RNA interactions for Protein: Q9NZE8

MRPL35, 39S ribosomal protein L35, mitochondrial, humanhuman

Known RBP Predictions only

Length 188 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL35Q9NZE8 NFU1-203ENST00000410022 1467 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
MRPL35Q9NZE8 LONRF3-202ENST00000371628 2550 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
MRPL35Q9NZE8 PRKAA1-202ENST00000354209 1918 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
MRPL35Q9NZE8 LMAN2-208ENST00000515209 1149 ntAPPRIS ALT2 TSL 3 BASIC15.16■□□□□ 0.02
MRPL35Q9NZE8 HSD17B1P1-201ENST00000590052 955 ntBASIC15.16■□□□□ 0.02
MRPL35Q9NZE8 RNF180-201ENST00000296615 1727 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
MRPL35Q9NZE8 FADS6-203ENST00000612771 2154 ntAPPRIS P2 TSL 1 (best) BASIC15.16■□□□□ 0.02
MRPL35Q9NZE8 FAM66B-202ENST00000606573 2630 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
MRPL35Q9NZE8 KCNS2-201ENST00000287042 5219 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
MRPL35Q9NZE8 ZNF398-202ENST00000475153 2860 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
MRPL35Q9NZE8 PSIP1-201ENST00000380715 1966 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
MRPL35Q9NZE8 SPG21-202ENST00000416889 1533 ntTSL 2 BASIC15.16■□□□□ 0.02
MRPL35Q9NZE8 MTERF3-204ENST00000523821 1529 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
MRPL35Q9NZE8 WDR86-207ENST00000621812 1542 ntTSL 5 BASIC15.16■□□□□ 0.02
MRPL35Q9NZE8 PITX2-201ENST00000306732 2320 ntAPPRIS P4 TSL 1 (best) BASIC15.16■□□□□ 0.02
MRPL35Q9NZE8 SHISA8-202ENST00000621082 1405 ntAPPRIS P2 TSL 5 BASIC15.16■□□□□ 0.02
MRPL35Q9NZE8 NFIX-202ENST00000360105 5459 ntTSL 5 BASIC15.16■□□□□ 0.02
MRPL35Q9NZE8 NYX-202ENST00000378220 2297 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
MRPL35Q9NZE8 WNT7B-202ENST00000409496 2285 ntAPPRIS ALT1 TSL 2 BASIC15.15■□□□□ 0.02
MRPL35Q9NZE8 CCDC47-202ENST00000403162 2195 ntAPPRIS P1 TSL 2 BASIC15.15■□□□□ 0.02
MRPL35Q9NZE8 UCHL5-205ENST00000367454 1815 ntAPPRIS ALT1 TSL 1 (best) BASIC15.15■□□□□ 0.02
MRPL35Q9NZE8 RIMBP3B-201ENST00000620804 6105 ntAPPRIS P1 BASIC15.15■□□□□ 0.02
MRPL35Q9NZE8 RBFOX2-209ENST00000438146 1356 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
MRPL35Q9NZE8 TSNARE1-208ENST00000524325 1963 ntAPPRIS P3 TSL 2 BASIC15.15■□□□□ 0.02
MRPL35Q9NZE8 SOX18-201ENST00000340356 1864 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
MRPL35Q9NZE8 DLGAP4-201ENST00000339266 5016 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
MRPL35Q9NZE8 C20orf24-201ENST00000342422 896 ntTSL 2 BASIC15.15■□□□□ 0.02
MRPL35Q9NZE8 C20orf24-202ENST00000344795 1114 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
MRPL35Q9NZE8 RSPO4-202ENST00000400634 722 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
MRPL35Q9NZE8 HYI-210ENST00000486909 905 ntTSL 5 BASIC15.15■□□□□ 0.02
MRPL35Q9NZE8 UBE2I-213ENST00000566587 1098 ntAPPRIS P1 TSL 2 BASIC15.15■□□□□ 0.02
MRPL35Q9NZE8 PLEKHH3-204ENST00000591022 2983 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
MRPL35Q9NZE8 C16orf70-201ENST00000219139 2865 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
MRPL35Q9NZE8 PIKFYVE-203ENST00000392202 2039 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
MRPL35Q9NZE8 FAM129C-203ENST00000449408 2004 ntAPPRIS ALT2 TSL 2 BASIC15.15■□□□□ 0.02
MRPL35Q9NZE8 RNF32-207ENST00000405335 1938 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
MRPL35Q9NZE8 SNUPN-205ENST00000564644 1931 ntAPPRIS P1 TSL 2 BASIC15.15■□□□□ 0.02
MRPL35Q9NZE8 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC15.15■□□□□ 0.02
MRPL35Q9NZE8 PWWP2A-205ENST00000523662 1819 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
MRPL35Q9NZE8 GPR35-201ENST00000319838 2249 ntAPPRIS P3 TSL 2 BASIC15.15■□□□□ 0.02
MRPL35Q9NZE8 NFIB-207ENST00000397579 3129 ntTSL 5 BASIC15.15■□□□□ 0.02
MRPL35Q9NZE8 SYT5-202ENST00000537500 2612 ntAPPRIS P1 TSL 2 BASIC15.14■□□□□ 0.01
MRPL35Q9NZE8 NUDT11-201ENST00000375992 2385 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
MRPL35Q9NZE8 TPBGL-201ENST00000562197 2793 ntAPPRIS P1 BASIC15.14■□□□□ 0.01
MRPL35Q9NZE8 HAND2-AS1-237ENST00000616485 2420 ntTSL 2 BASIC15.14■□□□□ 0.01
MRPL35Q9NZE8 CACNA1A-246ENST00000637736 8340 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
MRPL35Q9NZE8 NPLOC4-201ENST00000331134 4415 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
MRPL35Q9NZE8 NAB2-201ENST00000300131 2711 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
MRPL35Q9NZE8 RITA1-201ENST00000548278 2053 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
MRPL35Q9NZE8 DVL1-204ENST00000610709 2268 ntTSL 2 BASIC15.14■□□□□ 0.01
MRPL35Q9NZE8 C17orf67-201ENST00000397861 2013 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
MRPL35Q9NZE8 FAM91A1-207ENST00000521166 2706 ntTSL 2 BASIC15.14■□□□□ 0.01
MRPL35Q9NZE8 UBP1-202ENST00000283629 4148 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
MRPL35Q9NZE8 AL117348.2-201ENST00000432920 1625 ntAPPRIS P1 TSL 2 BASIC15.14■□□□□ 0.01
MRPL35Q9NZE8 CRHR1-203ENST00000339069 2490 ntTSL 2 BASIC15.14■□□□□ 0.01
MRPL35Q9NZE8 TMEM235-202ENST00000421688 2490 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
MRPL35Q9NZE8 SIMC1-204ENST00000430704 1925 ntAPPRIS P3 TSL 2 BASIC15.13■□□□□ 0.01
MRPL35Q9NZE8 CDK13-202ENST00000340829 5066 ntAPPRIS ALT1 TSL 1 (best) BASIC15.13■□□□□ 0.01
MRPL35Q9NZE8 ZNRF3-203ENST00000544604 6851 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
MRPL35Q9NZE8 MEN1-202ENST00000315422 3148 ntAPPRIS ALT1 TSL 5 BASIC15.13■□□□□ 0.01
MRPL35Q9NZE8 ZNF37BP-201ENST00000435805 1695 ntTSL 5 BASIC15.13■□□□□ 0.01
MRPL35Q9NZE8 FA2H-201ENST00000219368 2424 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
MRPL35Q9NZE8 CBLN2-201ENST00000269503 2945 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
MRPL35Q9NZE8 BRSK1-201ENST00000309383 3079 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
MRPL35Q9NZE8 NEURL3-201ENST00000310865 1710 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
MRPL35Q9NZE8 RBBP7-202ENST00000380084 2036 ntTSL 2 BASIC15.13■□□□□ 0.01
MRPL35Q9NZE8 PTPA-204ENST00000355007 2515 ntTSL 5 BASIC15.13■□□□□ 0.01
MRPL35Q9NZE8 YTHDF3-213ENST00000621820 2363 ntTSL 2 BASIC15.13■□□□□ 0.01
MRPL35Q9NZE8 USP21-202ENST00000368001 2095 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
MRPL35Q9NZE8 CDC20-202ENST00000372462 1777 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
MRPL35Q9NZE8 SNX21-212ENST00000491381 1607 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
MRPL35Q9NZE8 AL391650.1-201ENST00000448923 1468 ntAPPRIS P1 TSL 2 BASIC15.13■□□□□ 0.01
MRPL35Q9NZE8 IRF3-207ENST00000593922 1494 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
MRPL35Q9NZE8 CDAN1-201ENST00000356231 4637 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
MRPL35Q9NZE8 MAP2K5-204ENST00000395476 1689 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
MRPL35Q9NZE8 PRSS33-202ENST00000570702 1676 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
MRPL35Q9NZE8 CRMP1-201ENST00000324989 3146 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
MRPL35Q9NZE8 RAI14-201ENST00000265109 5092 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
MRPL35Q9NZE8 SIGLEC15-201ENST00000389474 1573 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
MRPL35Q9NZE8 TBC1D2B-202ENST00000409931 6086 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
MRPL35Q9NZE8 TBL1Y-203ENST00000383032 2407 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
MRPL35Q9NZE8 AC016065.1-201ENST00000500118 2413 ntTSL 2 BASIC15.12■□□□□ 0.01
MRPL35Q9NZE8 ULK1-201ENST00000321867 5310 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
MRPL35Q9NZE8 NDUFAF6-203ENST00000396124 1798 ntAPPRIS P1 TSL 2 BASIC15.12■□□□□ 0.01
MRPL35Q9NZE8 CITED2-202ENST00000536159 1797 ntAPPRIS P1 TSL 3 BASIC15.12■□□□□ 0.01
MRPL35Q9NZE8 LONRF2P2-201ENST00000439212 571 ntBASIC15.12■□□□□ 0.01
MRPL35Q9NZE8 U85056.1-201ENST00000616429 682 ntBASIC15.12■□□□□ 0.01
MRPL35Q9NZE8 KLC1-208ENST00000452929 2453 ntTSL 5 BASIC15.12■□□□□ 0.01
MRPL35Q9NZE8 FHL3-201ENST00000373016 1647 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
MRPL35Q9NZE8 ASCC1-205ENST00000394919 2683 ntAPPRIS P1 TSL 2 BASIC15.12■□□□□ 0.01
MRPL35Q9NZE8 ITPKB-203ENST00000429204 6162 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
MRPL35Q9NZE8 P2RX4-202ENST00000337233 2032 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
MRPL35Q9NZE8 UROS-204ENST00000368797 1313 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
MRPL35Q9NZE8 BASP1-201ENST00000322611 1878 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
MRPL35Q9NZE8 RIMKLB-202ENST00000357529 5830 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
MRPL35Q9NZE8 PRICKLE3-206ENST00000599218 2062 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
MRPL35Q9NZE8 AC233992.2-201ENST00000531225 1596 ntAPPRIS P1 TSL 2 BASIC15.11■□□□□ 0.01
MRPL35Q9NZE8 ACAA1-202ENST00000333167 1785 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
MRPL35Q9NZE8 ARRDC2-201ENST00000222250 2503 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
MRPL35Q9NZE8 FAHD1-201ENST00000382666 1964 ntTSL 2 BASIC15.11■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 21.9 ms