Protein–RNA interactions for Protein: Q9NWY4

HPF1, Histone PARylation factor 1, humanhuman

Predictions only

Length 346 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPF1Q9NWY4 UCHL1-210ENST00000512788 785 ntTSL 3 BASIC19.79■□□□□ 0.76
HPF1Q9NWY4 CHTF8-210ENST00000523421 766 ntTSL 3 BASIC19.79■□□□□ 0.76
HPF1Q9NWY4 GALNS-213ENST00000569433 723 ntTSL 3 BASIC19.79■□□□□ 0.76
HPF1Q9NWY4 CRHR1-202ENST00000314537 2535 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
HPF1Q9NWY4 PDIA6-207ENST00000540494 2509 ntAPPRIS ALT1 TSL 2 BASIC19.79■□□□□ 0.76
HPF1Q9NWY4 PARD3-210ENST00000374794 5669 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
HPF1Q9NWY4 ACTR1B-201ENST00000289228 2243 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
HPF1Q9NWY4 TRH-201ENST00000302649 1978 ntAPPRIS P2 TSL 1 (best) BASIC19.79■□□□□ 0.76
HPF1Q9NWY4 WDR86-201ENST00000334493 2023 ntAPPRIS P1 TSL 5 BASIC19.78■□□□□ 0.76
HPF1Q9NWY4 GPR143-203ENST00000467482 1762 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
HPF1Q9NWY4 ZNF395-210ENST00000523095 1790 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
HPF1Q9NWY4 HOXD1-201ENST00000331462 1975 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
HPF1Q9NWY4 SERBP1-202ENST00000370990 1621 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
HPF1Q9NWY4 C5orf38-201ENST00000334000 890 ntAPPRIS P3 TSL 1 (best) BASIC19.78■□□□□ 0.76
HPF1Q9NWY4 MCRIP1-204ENST00000570507 765 ntTSL 2 BASIC19.78■□□□□ 0.76
HPF1Q9NWY4 MCRIP1-208ENST00000575061 618 ntTSL 5 BASIC19.78■□□□□ 0.76
HPF1Q9NWY4 SUZ12P1-202ENST00000578070 929 ntTSL 5 BASIC19.78■□□□□ 0.76
HPF1Q9NWY4 NEDD4L-225ENST00000589054 1033 ntTSL 3 BASIC19.78■□□□□ 0.76
HPF1Q9NWY4 AP001160.5-201ENST00000636508 485 ntAPPRIS P1 BASIC19.78■□□□□ 0.76
HPF1Q9NWY4 ASF1B-201ENST00000263382 2059 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
HPF1Q9NWY4 SDR39U1-208ENST00000554698 1364 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
HPF1Q9NWY4 GPR6-202ENST00000414000 1945 ntTSL 2 BASIC19.78■□□□□ 0.76
HPF1Q9NWY4 HIRA-201ENST00000263208 4053 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
HPF1Q9NWY4 SLC35D3-201ENST00000331858 2359 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
HPF1Q9NWY4 GNB2-201ENST00000303210 1878 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
HPF1Q9NWY4 ENTPD5-206ENST00000556242 1437 ntTSL 5 BASIC19.77■□□□□ 0.76
HPF1Q9NWY4 AC138028.2-201ENST00000440406 1539 ntTSL 2 BASIC19.77■□□□□ 0.76
HPF1Q9NWY4 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
HPF1Q9NWY4 NFKBIB-201ENST00000313582 1159 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
HPF1Q9NWY4 IL15RA-201ENST00000379971 588 ntTSL 3 BASIC19.77■□□□□ 0.76
HPF1Q9NWY4 AC092468.1-201ENST00000491321 562 ntTSL 4 BASIC19.77■□□□□ 0.76
HPF1Q9NWY4 AP002748.1-201ENST00000504911 580 ntTSL 3 BASIC19.77■□□□□ 0.76
HPF1Q9NWY4 FAXDC2-211ENST00000520968 558 ntTSL 4 BASIC19.77■□□□□ 0.76
HPF1Q9NWY4 AC012414.4-201ENST00000560839 1074 ntTSL 5 BASIC19.77■□□□□ 0.76
HPF1Q9NWY4 AL137784.2-201ENST00000607332 1000 ntBASIC19.77■□□□□ 0.76
HPF1Q9NWY4 AC060814.5-201ENST00000630916 1074 ntTSL 2 BASIC19.77■□□□□ 0.76
HPF1Q9NWY4 KEAP1-202ENST00000393623 2648 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
HPF1Q9NWY4 SLC25A47-202ENST00000557052 1552 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
HPF1Q9NWY4 PLEKHA8-203ENST00000396259 2840 ntTSL 2 BASIC19.77■□□□□ 0.76
HPF1Q9NWY4 SPTBN4-201ENST00000338932 8686 ntAPPRIS ALT1 TSL 5 BASIC19.77■□□□□ 0.76
HPF1Q9NWY4 USP21-202ENST00000368001 2095 ntTSL 1 (best) BASIC19.77■□□□□ 0.75
HPF1Q9NWY4 DPF1-217ENST00000614244 2356 ntTSL 1 (best) BASIC19.77■□□□□ 0.75
HPF1Q9NWY4 RAB1A-202ENST00000409751 1333 ntTSL 5 BASIC19.76■□□□□ 0.75
HPF1Q9NWY4 ARX-201ENST00000379044 2876 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
HPF1Q9NWY4 UNC50-204ENST00000409975 2172 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
HPF1Q9NWY4 PXK-203ENST00000383715 1756 ntTSL 5 BASIC19.76■□□□□ 0.75
HPF1Q9NWY4 NKX6-3-202ENST00000524115 1683 ntTSL 2 BASIC19.76■□□□□ 0.75
HPF1Q9NWY4 JSRP1-201ENST00000300961 1138 ntAPPRIS P1 TSL 2 BASIC19.76■□□□□ 0.75
HPF1Q9NWY4 MELTF-AS1-202ENST00000415244 951 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
HPF1Q9NWY4 TRAPPC6A-205ENST00000592647 514 ntTSL 2 BASIC19.76■□□□□ 0.75
HPF1Q9NWY4 TMEM182-210ENST00000639249 1025 ntTSL 5 BASIC19.76■□□□□ 0.75
HPF1Q9NWY4 ZNF76-203ENST00000373953 2716 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
HPF1Q9NWY4 PRR16-202ENST00000407149 1747 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
HPF1Q9NWY4 TUBG1-201ENST00000251413 1611 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
HPF1Q9NWY4 LYPLA1-201ENST00000316963 2585 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
HPF1Q9NWY4 ESRRAP2-201ENST00000418437 1549 ntBASIC19.76■□□□□ 0.75
HPF1Q9NWY4 ANKLE2-201ENST00000357997 4646 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
HPF1Q9NWY4 CDKN1C-202ENST00000414822 2051 ntAPPRIS P3 TSL 1 (best) BASIC19.75■□□□□ 0.75
HPF1Q9NWY4 AP006623.1-201ENST00000506172 2061 ntTSL 5 BASIC19.75■□□□□ 0.75
HPF1Q9NWY4 HABP4-201ENST00000375249 2615 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
HPF1Q9NWY4 ASAP2-202ENST00000315273 5582 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
HPF1Q9NWY4 TMEM5-201ENST00000261234 1918 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
HPF1Q9NWY4 CERKL-204ENST00000374970 1392 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
HPF1Q9NWY4 DPH7-201ENST00000277540 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
HPF1Q9NWY4 BCKDHB-203ENST00000369760 743 ntTSL 3 BASIC19.75■□□□□ 0.75
HPF1Q9NWY4 CTNNAL1-202ENST00000374593 761 ntTSL 3 BASIC19.75■□□□□ 0.75
HPF1Q9NWY4 PGAP3-204ENST00000429199 970 ntTSL 2 BASIC19.75■□□□□ 0.75
HPF1Q9NWY4 AC011825.4-201ENST00000582233 473 ntTSL 2 BASIC19.75■□□□□ 0.75
HPF1Q9NWY4 RPS15-210ENST00000592623 873 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
HPF1Q9NWY4 AC007773.1-201ENST00000592680 972 ntTSL 2 BASIC19.75■□□□□ 0.75
HPF1Q9NWY4 HSD17B14-204ENST00000599157 991 ntTSL 3 BASIC19.75■□□□□ 0.75
HPF1Q9NWY4 IKBKGP1-201ENST00000612193 1073 ntBASIC19.75■□□□□ 0.75
HPF1Q9NWY4 COG8-201ENST00000562081 1731 ntAPPRIS P1 TSL 5 BASIC19.75■□□□□ 0.75
HPF1Q9NWY4 DTX4-201ENST00000227451 5642 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
HPF1Q9NWY4 AC080112.2-201ENST00000578774 2094 ntTSL 4 BASIC19.75■□□□□ 0.75
HPF1Q9NWY4 C18orf65-201ENST00000622985 2076 ntTSL 2 BASIC19.75■□□□□ 0.75
HPF1Q9NWY4 RNF166-202ENST00000537718 1525 ntTSL 2 BASIC19.75■□□□□ 0.75
HPF1Q9NWY4 AC004854.2-201ENST00000608450 1441 ntBASIC19.75■□□□□ 0.75
HPF1Q9NWY4 KLC1-227ENST00000634686 2229 ntTSL 5 BASIC19.75■□□□□ 0.75
HPF1Q9NWY4 C9orf163-202ENST00000624034 2573 ntBASIC19.75■□□□□ 0.75
HPF1Q9NWY4 CYB561D2-205ENST00000425346 1319 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
HPF1Q9NWY4 WT1-AS-205ENST00000494911 1320 ntTSL 4 BASIC19.75■□□□□ 0.75
HPF1Q9NWY4 DLL3-202ENST00000356433 2055 ntAPPRIS P1 TSL 2 BASIC19.74■□□□□ 0.75
HPF1Q9NWY4 ALDH6A1-201ENST00000350259 1869 ntAPPRIS ALT2 TSL 2 BASIC19.74■□□□□ 0.75
HPF1Q9NWY4 AC104986.2-201ENST00000521696 380 ntTSL 2 BASIC19.74■□□□□ 0.75
HPF1Q9NWY4 TESC-206ENST00000541210 936 ntTSL 3 BASIC19.74■□□□□ 0.75
HPF1Q9NWY4 PDCD5-204ENST00000586035 601 ntTSL 3 BASIC19.74■□□□□ 0.75
HPF1Q9NWY4 CDK5-204ENST00000485972 1758 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
HPF1Q9NWY4 RALB-201ENST00000272519 2344 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
HPF1Q9NWY4 HAS1-201ENST00000222115 2087 ntAPPRIS P3 TSL 1 (best) BASIC19.74■□□□□ 0.75
HPF1Q9NWY4 PWWP2A-205ENST00000523662 1819 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
HPF1Q9NWY4 DPP7-201ENST00000371579 1590 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
HPF1Q9NWY4 PITX1-205ENST00000506438 1305 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
HPF1Q9NWY4 TOP1MT-201ENST00000329245 1958 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
HPF1Q9NWY4 ZFP69B-204ENST00000484445 1976 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
HPF1Q9NWY4 GATA1-202ENST00000376670 1497 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
HPF1Q9NWY4 AP004607.4-201ENST00000530158 1459 ntBASIC19.73■□□□□ 0.75
HPF1Q9NWY4 PDE5A-201ENST00000264805 3020 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
HPF1Q9NWY4 COL15A1-201ENST00000375001 5496 ntAPPRIS P2 TSL 1 (best) BASIC19.73■□□□□ 0.75
HPF1Q9NWY4 SLC19A1-209ENST00000485649 1896 ntAPPRIS ALT2 TSL 2 BASIC19.73■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 35.2 ms