Protein–RNA interactions for Protein: Q9NWM3

CUEDC1, CUE domain-containing protein 1, humanhuman

Predicted RBP Predictions only

Length 386 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CUEDC1Q9NWM3 BX005040.4-201ENST00000637145 1518 ntBASIC20.69■□□□□ 0.9
CUEDC1Q9NWM3 NT5C3AP1-201ENST00000394500 1012 ntBASIC20.69■□□□□ 0.9
CUEDC1Q9NWM3 NMRAL1-202ENST00000404295 1233 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CUEDC1Q9NWM3 MELTF-AS1-202ENST00000415244 951 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
CUEDC1Q9NWM3 ZFPL1-203ENST00000525509 478 ntTSL 2 BASIC20.69■□□□□ 0.9
CUEDC1Q9NWM3 AP2S1-203ENST00000593442 636 ntTSL 2 BASIC20.69■□□□□ 0.9
CUEDC1Q9NWM3 KCTD13-202ENST00000561540 1773 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
CUEDC1Q9NWM3 FDFT1-201ENST00000220584 2176 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CUEDC1Q9NWM3 SLC10A3-201ENST00000263512 2161 ntAPPRIS P3 TSL 2 BASIC20.69■□□□□ 0.9
CUEDC1Q9NWM3 RARG-201ENST00000338561 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CUEDC1Q9NWM3 LINC00969-219ENST00000453324 1439 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
CUEDC1Q9NWM3 LHFPL3-202ENST00000424859 1852 ntAPPRIS P5 TSL 1 (best) BASIC20.69■□□□□ 0.9
CUEDC1Q9NWM3 LINC02175-201ENST00000571219 1875 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
CUEDC1Q9NWM3 FAM99A-202ENST00000538190 1989 ntBASIC20.68■□□□□ 0.9
CUEDC1Q9NWM3 SOAT2-201ENST00000301466 2044 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CUEDC1Q9NWM3 EXOSC6-201ENST00000435634 5153 ntAPPRIS P1 BASIC20.68■□□□□ 0.9
CUEDC1Q9NWM3 SERBP1-202ENST00000370990 1621 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
CUEDC1Q9NWM3 MFSD6L-201ENST00000329805 2188 ntAPPRIS P1 BASIC20.68■□□□□ 0.9
CUEDC1Q9NWM3 QPCT-201ENST00000338415 1739 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CUEDC1Q9NWM3 NIPA2-203ENST00000398013 2280 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CUEDC1Q9NWM3 BCL2L12-201ENST00000246784 990 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
CUEDC1Q9NWM3 NXT1-201ENST00000254998 1123 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CUEDC1Q9NWM3 CCDC28B-201ENST00000373602 1089 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CUEDC1Q9NWM3 UHRF2-202ENST00000381373 802 ntTSL 3 BASIC20.68■□□□□ 0.9
CUEDC1Q9NWM3 AC034268.1-201ENST00000441047 882 ntBASIC20.68■□□□□ 0.9
CUEDC1Q9NWM3 AL355877.1-204ENST00000451482 1078 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
CUEDC1Q9NWM3 AC005410.1-201ENST00000579522 462 ntTSL 3 BASIC20.68■□□□□ 0.9
CUEDC1Q9NWM3 AL138963.3-201ENST00000610057 588 ntTSL 4 BASIC20.68■□□□□ 0.9
CUEDC1Q9NWM3 C11orf96-202ENST00000528572 1834 ntBASIC20.68■□□□□ 0.9
CUEDC1Q9NWM3 SLC22A31-201ENST00000562855 1909 ntAPPRIS P1 TSL 5 BASIC20.68■□□□□ 0.9
CUEDC1Q9NWM3 LMLN-210ENST00000482695 2010 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
CUEDC1Q9NWM3 PLPP5-203ENST00000424479 2130 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CUEDC1Q9NWM3 A1BG-201ENST00000263100 1722 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CUEDC1Q9NWM3 ST3GAL4-215ENST00000532243 1825 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
CUEDC1Q9NWM3 FAM19A5-202ENST00000358295 2638 ntAPPRIS P1 TSL 2 BASIC20.67■□□□□ 0.9
CUEDC1Q9NWM3 AC026471.6-201ENST00000622954 1905 ntBASIC20.67■□□□□ 0.9
CUEDC1Q9NWM3 CAMKK2-208ENST00000412367 2006 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
CUEDC1Q9NWM3 PCSK1N-201ENST00000218230 1050 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CUEDC1Q9NWM3 KRTAP17-1-201ENST00000334202 779 ntAPPRIS P1 BASIC20.67■□□□□ 0.9
CUEDC1Q9NWM3 TSPAN2-201ENST00000369515 793 ntTSL 3 BASIC20.67■□□□□ 0.9
CUEDC1Q9NWM3 FAM219A-202ENST00000379078 770 ntTSL 3 BASIC20.67■□□□□ 0.9
CUEDC1Q9NWM3 PRKCQ-AS1-202ENST00000445427 1133 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
CUEDC1Q9NWM3 LINC01942-201ENST00000521373 513 ntTSL 4 BASIC20.67■□□□□ 0.9
CUEDC1Q9NWM3 PYCARD-AS1-201ENST00000561916 1095 ntTSL 2 BASIC20.67■□□□□ 0.9
CUEDC1Q9NWM3 NOTUM-201ENST00000409678 2329 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CUEDC1Q9NWM3 REEP5-202ENST00000379638 3326 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CUEDC1Q9NWM3 PRR7-201ENST00000323249 1480 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CUEDC1Q9NWM3 MXRA7-201ENST00000355797 5661 ntAPPRIS P4 TSL 2 BASIC20.67■□□□□ 0.9
CUEDC1Q9NWM3 MBNL3-202ENST00000370844 1643 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
CUEDC1Q9NWM3 OXCT2-201ENST00000327582 1826 ntAPPRIS P1 BASIC20.67■□□□□ 0.9
CUEDC1Q9NWM3 ARID1B-220ENST00000636930 8246 ntAPPRIS ALT2 TSL 2 BASIC20.67■□□□□ 0.9
CUEDC1Q9NWM3 SLC35A3-204ENST00000427993 2062 ntAPPRIS P1 TSL 5 BASIC20.66■□□□□ 0.9
CUEDC1Q9NWM3 NELFCD-213ENST00000602795 2305 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CUEDC1Q9NWM3 HOXA10-201ENST00000283921 2541 ntAPPRIS P2 TSL 1 (best) BASIC20.66■□□□□ 0.9
CUEDC1Q9NWM3 IER5L-201ENST00000372491 2711 ntAPPRIS P1 BASIC20.66■□□□□ 0.9
CUEDC1Q9NWM3 MOSPD3-202ENST00000379527 1016 ntAPPRIS P1 TSL 5 BASIC20.66■□□□□ 0.9
CUEDC1Q9NWM3 AC027612.3-201ENST00000413684 1047 ntBASIC20.66■□□□□ 0.9
CUEDC1Q9NWM3 AC022517.1-201ENST00000592429 346 ntBASIC20.66■□□□□ 0.9
CUEDC1Q9NWM3 MRM1-203ENST00000612760 1284 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
CUEDC1Q9NWM3 SP2-202ENST00000613139 908 ntTSL 5 BASIC20.66■□□□□ 0.9
CUEDC1Q9NWM3 ZDHHC7-203ENST00000564466 1488 ntTSL 5 BASIC20.66■□□□□ 0.9
CUEDC1Q9NWM3 TLE3-216ENST00000559191 1575 ntTSL 5 BASIC20.66■□□□□ 0.9
CUEDC1Q9NWM3 SPAST-204ENST00000621856 1715 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
CUEDC1Q9NWM3 NPTXR-201ENST00000333039 5784 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
CUEDC1Q9NWM3 NRXN2-204ENST00000377559 6413 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
CUEDC1Q9NWM3 PLK5-202ENST00000454744 1930 ntAPPRIS P2 TSL 2 BASIC20.65■□□□□ 0.9
CUEDC1Q9NWM3 BICDL2-201ENST00000389347 1811 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CUEDC1Q9NWM3 GMDS-202ENST00000380815 1752 ntAPPRIS P3 TSL 1 (best) BASIC20.65■□□□□ 0.9
CUEDC1Q9NWM3 TSPAN3-202ENST00000346495 1647 ntTSL 2 BASIC20.65■□□□□ 0.9
CUEDC1Q9NWM3 AK1-201ENST00000223836 736 ntTSL 3 BASIC20.65■□□□□ 0.9
CUEDC1Q9NWM3 BHLHA9-201ENST00000391429 902 ntAPPRIS P1 BASIC20.65■□□□□ 0.9
CUEDC1Q9NWM3 AL034346.1-201ENST00000568244 1277 ntBASIC20.65■□□□□ 0.9
CUEDC1Q9NWM3 TPRG1LP1-201ENST00000598702 760 ntBASIC20.65■□□□□ 0.9
CUEDC1Q9NWM3 SH3GLB2-203ENST00000372564 2982 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CUEDC1Q9NWM3 CACYBP-201ENST00000367679 2766 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CUEDC1Q9NWM3 SPN-202ENST00000395389 1935 ntAPPRIS P2 TSL 1 (best) BASIC20.65■□□□□ 0.9
CUEDC1Q9NWM3 HAUS3-202ENST00000443786 2430 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
CUEDC1Q9NWM3 CHST7-201ENST00000276055 2289 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
CUEDC1Q9NWM3 ZNF707-222ENST00000532158 2218 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
CUEDC1Q9NWM3 ANKRD63-201ENST00000434396 1143 ntAPPRIS P1 BASIC20.64■□□□□ 0.89
CUEDC1Q9NWM3 AC108002.2-201ENST00000519782 340 ntTSL 4 BASIC20.64■□□□□ 0.89
CUEDC1Q9NWM3 FRMD8-208ENST00000531296 366 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
CUEDC1Q9NWM3 HADH-209ENST00000603302 2032 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
CUEDC1Q9NWM3 KHDRBS2-201ENST00000281156 2332 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
CUEDC1Q9NWM3 GPSM1-201ENST00000291775 2114 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
CUEDC1Q9NWM3 GRM6-202ENST00000517717 2673 ntAPPRIS P1 TSL 5 BASIC20.63■□□□□ 0.89
CUEDC1Q9NWM3 ADCK2-203ENST00000476491 2092 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
CUEDC1Q9NWM3 RAB24-202ENST00000303270 1385 ntTSL 2 BASIC20.63■□□□□ 0.89
CUEDC1Q9NWM3 SLC26A5-209ENST00000393735 1947 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
CUEDC1Q9NWM3 C16orf58-209ENST00000567994 1845 ntTSL 5 BASIC20.63■□□□□ 0.89
CUEDC1Q9NWM3 NDUFB2-201ENST00000247866 504 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
CUEDC1Q9NWM3 VGLL4-208ENST00000424529 1025 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
CUEDC1Q9NWM3 RPLP2-207ENST00000530797 637 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
CUEDC1Q9NWM3 SUZ12P1-202ENST00000578070 929 ntTSL 5 BASIC20.63■□□□□ 0.89
CUEDC1Q9NWM3 TRAPPC6A-205ENST00000592647 514 ntTSL 2 BASIC20.63■□□□□ 0.89
CUEDC1Q9NWM3 MAGI2-202ENST00000419488 6800 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
CUEDC1Q9NWM3 GGA2-211ENST00000567468 1713 ntTSL 2 BASIC20.63■□□□□ 0.89
CUEDC1Q9NWM3 HAUS4-201ENST00000206474 1642 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
CUEDC1Q9NWM3 ZGPAT-201ENST00000328969 1945 ntTSL 2 BASIC20.63■□□□□ 0.89
CUEDC1Q9NWM3 FAM129C-211ENST00000600871 1822 ntAPPRIS ALT2 TSL 5 BASIC20.62■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 32.4 ms