Protein–RNA interactions for Protein: Q9NRR8

CDC42SE1, CDC42 small effector protein 1, humanhuman

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1Q9NRR8 CASZ1-202ENST00000377022 7936 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
CDC42SE1Q9NRR8 LAMP1-201ENST00000332556 2699 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
CDC42SE1Q9NRR8 USP13-201ENST00000263966 8323 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
CDC42SE1Q9NRR8 PMPCB-202ENST00000428154 1714 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
CDC42SE1Q9NRR8 ITGA8-201ENST00000378076 6755 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
CDC42SE1Q9NRR8 GNAS-AS1-202ENST00000443966 2341 ntTSL 5 BASIC11.09□□□□□ -0.63
CDC42SE1Q9NRR8 TMEM119-201ENST00000392806 2707 ntAPPRIS P2 TSL 1 (best) BASIC11.09□□□□□ -0.63
CDC42SE1Q9NRR8 CNNM3-202ENST00000377060 3308 ntTSL 2 BASIC11.09□□□□□ -0.63
CDC42SE1Q9NRR8 DPYSL3-202ENST00000398514 5309 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
CDC42SE1Q9NRR8 FZD10-201ENST00000229030 3281 ntAPPRIS P1 BASIC11.09□□□□□ -0.63
CDC42SE1Q9NRR8 ST3GAL3-201ENST00000262915 2470 ntTSL 5 BASIC11.09□□□□□ -0.63
CDC42SE1Q9NRR8 RNF146-203ENST00000368314 2369 ntAPPRIS ALT1 TSL 2 BASIC11.09□□□□□ -0.63
CDC42SE1Q9NRR8 CEL-201ENST00000372080 2384 ntAPPRIS P1 TSL 5 BASIC11.09□□□□□ -0.63
CDC42SE1Q9NRR8 ACBD4-214ENST00000591859 1998 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
CDC42SE1Q9NRR8 NTRK2-207ENST00000376214 5608 ntAPPRIS P3 TSL 5 BASIC11.09□□□□□ -0.63
CDC42SE1Q9NRR8 ZNF446-208ENST00000622313 1884 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
CDC42SE1Q9NRR8 BCL11B-202ENST00000357195 7559 ntAPPRIS P4 TSL 1 (best) BASIC11.09□□□□□ -0.63
CDC42SE1Q9NRR8 CXADR-201ENST00000284878 6254 ntAPPRIS P3 TSL 1 (best) BASIC11.09□□□□□ -0.63
CDC42SE1Q9NRR8 RNF157-201ENST00000269391 4955 ntAPPRIS P3 TSL 1 (best) BASIC11.09□□□□□ -0.63
CDC42SE1Q9NRR8 ACSL6-205ENST00000379246 2622 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
CDC42SE1Q9NRR8 REPS1-203ENST00000409812 2511 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
CDC42SE1Q9NRR8 ICA1-201ENST00000265577 2309 ntAPPRIS ALT1 TSL 5 BASIC11.09□□□□□ -0.63
CDC42SE1Q9NRR8 MAFF-202ENST00000407965 2325 ntAPPRIS P1 TSL 2 BASIC11.09□□□□□ -0.63
CDC42SE1Q9NRR8 ME3-212ENST00000543262 2311 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
CDC42SE1Q9NRR8 ATOH1-201ENST00000306011 2212 ntAPPRIS P1 BASIC11.09□□□□□ -0.63
CDC42SE1Q9NRR8 MTSS1L-204ENST00000616026 2241 ntAPPRIS ALT2 TSL 5 BASIC11.09□□□□□ -0.63
CDC42SE1Q9NRR8 TACC1-202ENST00000317827 7802 ntAPPRIS P3 TSL 1 (best) BASIC11.09□□□□□ -0.63
CDC42SE1Q9NRR8 BYSL-201ENST00000230340 2029 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
CDC42SE1Q9NRR8 ZNF598-204ENST00000563630 3371 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
CDC42SE1Q9NRR8 C19orf12-204ENST00000392276 1912 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
CDC42SE1Q9NRR8 IKZF1-207ENST00000413698 1808 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
CDC42SE1Q9NRR8 CHRFAM7A-202ENST00000397827 2794 ntTSL 5 BASIC11.09□□□□□ -0.63
CDC42SE1Q9NRR8 DIP2A-203ENST00000435722 2760 ntTSL 2 BASIC11.09□□□□□ -0.63
CDC42SE1Q9NRR8 BDH1-207ENST00000441275 1605 ntTSL 5 BASIC11.09□□□□□ -0.63
CDC42SE1Q9NRR8 BAG3-201ENST00000369085 2571 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
CDC42SE1Q9NRR8 HAPLN4-201ENST00000291481 3449 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
CDC42SE1Q9NRR8 GRB14-201ENST00000263915 2382 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
CDC42SE1Q9NRR8 SAR1B-208ENST00000507419 2287 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
CDC42SE1Q9NRR8 ZSCAN1-201ENST00000282326 2054 ntAPPRIS P1 TSL 2 BASIC11.08□□□□□ -0.63
CDC42SE1Q9NRR8 PMPCA-203ENST00000399219 1987 ntTSL 2 BASIC11.08□□□□□ -0.64
CDC42SE1Q9NRR8 ZFP69B-204ENST00000484445 1976 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
CDC42SE1Q9NRR8 IL17RC-201ENST00000295981 2621 ntAPPRIS P4 TSL 2 BASIC11.08□□□□□ -0.64
CDC42SE1Q9NRR8 DTX2-206ENST00000430490 2623 ntAPPRIS P3 TSL 1 (best) BASIC11.08□□□□□ -0.64
CDC42SE1Q9NRR8 CRACR2B-201ENST00000450448 1663 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
CDC42SE1Q9NRR8 CORO6-210ENST00000580212 2345 ntTSL 5 BASIC11.08□□□□□ -0.64
CDC42SE1Q9NRR8 AURKA-202ENST00000347343 2248 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
CDC42SE1Q9NRR8 RFFL-206ENST00000447669 2030 ntAPPRIS P1 TSL 5 BASIC11.08□□□□□ -0.64
CDC42SE1Q9NRR8 PRKAR1B-204ENST00000406797 2553 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
CDC42SE1Q9NRR8 UBR5-207ENST00000520539 10297 ntAPPRIS P3 TSL 1 (best) BASIC11.08□□□□□ -0.64
CDC42SE1Q9NRR8 GAS2L1-210ENST00000621062 2483 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
CDC42SE1Q9NRR8 MYH14-202ENST00000376970 6787 ntAPPRIS ALT2 TSL 5 BASIC11.08□□□□□ -0.64
CDC42SE1Q9NRR8 RLBP1-201ENST00000268125 1810 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
CDC42SE1Q9NRR8 FAM217A-201ENST00000274673 2265 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
CDC42SE1Q9NRR8 PRSS36-207ENST00000569305 2723 ntAPPRIS ALT2 TSL 1 (best) BASIC11.08□□□□□ -0.64
CDC42SE1Q9NRR8 ADARB1-202ENST00000360697 6604 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
CDC42SE1Q9NRR8 AQP11-201ENST00000313578 2152 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
CDC42SE1Q9NRR8 HSF2-201ENST00000368455 2549 ntAPPRIS P3 TSL 1 (best) BASIC11.08□□□□□ -0.64
CDC42SE1Q9NRR8 BACE2-202ENST00000330333 2993 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
CDC42SE1Q9NRR8 TDRD10-202ENST00000368482 2331 ntAPPRIS P3 TSL 1 (best) BASIC11.08□□□□□ -0.64
CDC42SE1Q9NRR8 CLINT1-207ENST00000523908 2346 ntAPPRIS ALT1 TSL 1 (best) BASIC11.08□□□□□ -0.64
CDC42SE1Q9NRR8 CPT2-203ENST00000635862 2319 ntTSL 5 BASIC11.08□□□□□ -0.64
CDC42SE1Q9NRR8 PARP2-202ENST00000429687 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC11.08□□□□□ -0.64
CDC42SE1Q9NRR8 FAM89B-201ENST00000316409 1409 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
CDC42SE1Q9NRR8 COMT-203ENST00000403184 2217 ntTSL 2 BASIC11.08□□□□□ -0.64
CDC42SE1Q9NRR8 IQCJ-SCHIP1-203ENST00000476809 1780 ntAPPRIS ALT2 TSL 5 BASIC11.08□□□□□ -0.64
CDC42SE1Q9NRR8 UVSSA-207ENST00000511216 2927 ntAPPRIS P2 TSL 1 (best) BASIC11.08□□□□□ -0.64
CDC42SE1Q9NRR8 HECTD1-201ENST00000399332 9134 ntAPPRIS P1 TSL 5 BASIC11.08□□□□□ -0.64
CDC42SE1Q9NRR8 ZNF487-202ENST00000437590 2111 ntTSL 2 BASIC11.08□□□□□ -0.64
CDC42SE1Q9NRR8 TMEM206-205ENST00000535273 2119 ntTSL 2 BASIC11.08□□□□□ -0.64
CDC42SE1Q9NRR8 FOXI1-202ENST00000449804 2011 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
CDC42SE1Q9NRR8 AGTR1-201ENST00000349243 2356 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
CDC42SE1Q9NRR8 BANP-223ENST00000538234 2372 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
CDC42SE1Q9NRR8 HERPUD2-202ENST00000396081 3057 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
CDC42SE1Q9NRR8 BEST2-201ENST00000042931 1908 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
CDC42SE1Q9NRR8 ULK3-201ENST00000440863 2623 ntAPPRIS P3 TSL 2 BASIC11.07□□□□□ -0.64
CDC42SE1Q9NRR8 CLDN5-202ENST00000406028 2548 ntTSL 2 BASIC11.07□□□□□ -0.64
CDC42SE1Q9NRR8 ATXN2-227ENST00000616825 4575 ntAPPRIS ALT2 TSL 5 BASIC11.07□□□□□ -0.64
CDC42SE1Q9NRR8 HOXB3-205ENST00000470495 4208 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
CDC42SE1Q9NRR8 PIANP-201ENST00000320591 2323 ntAPPRIS P3 TSL 1 (best) BASIC11.07□□□□□ -0.64
CDC42SE1Q9NRR8 BACE2-203ENST00000347667 8764 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
CDC42SE1Q9NRR8 GNA14-201ENST00000341700 2482 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
CDC42SE1Q9NRR8 PKMYT1-211ENST00000573944 1891 ntAPPRIS P1 TSL 5 BASIC11.07□□□□□ -0.64
CDC42SE1Q9NRR8 PDE4D-204ENST00000358923 2969 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
CDC42SE1Q9NRR8 RALGPS1-208ENST00000424082 2362 ntTSL 2 BASIC11.07□□□□□ -0.64
CDC42SE1Q9NRR8 TTBK2-205ENST00000567274 1777 ntTSL 5 BASIC11.07□□□□□ -0.64
CDC42SE1Q9NRR8 TNPO2-201ENST00000356861 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC11.07□□□□□ -0.64
CDC42SE1Q9NRR8 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
CDC42SE1Q9NRR8 IFRD1-202ENST00000403825 2290 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
CDC42SE1Q9NRR8 GORASP1-206ENST00000422110 2523 ntTSL 2 BASIC11.07□□□□□ -0.64
CDC42SE1Q9NRR8 TBC1D22A-206ENST00000407381 1949 ntTSL 5 BASIC11.07□□□□□ -0.64
CDC42SE1Q9NRR8 ADAP1-216ENST00000539900 2178 ntTSL 2 BASIC11.07□□□□□ -0.64
CDC42SE1Q9NRR8 T-201ENST00000296946 2436 ntAPPRIS P1 TSL 5 BASIC11.07□□□□□ -0.64
CDC42SE1Q9NRR8 ETNK2-202ENST00000367201 2431 ntAPPRIS ALT2 TSL 2 BASIC11.07□□□□□ -0.64
CDC42SE1Q9NRR8 WIPF1-206ENST00000409891 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC11.07□□□□□ -0.64
CDC42SE1Q9NRR8 EBF1-202ENST00000380654 2345 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
CDC42SE1Q9NRR8 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC11.07□□□□□ -0.64
CDC42SE1Q9NRR8 CENPT-208ENST00000562787 2345 ntAPPRIS P2 TSL 2 BASIC11.07□□□□□ -0.64
CDC42SE1Q9NRR8 PPP3CC-203ENST00000397775 2094 ntTSL 2 BASIC11.07□□□□□ -0.64
CDC42SE1Q9NRR8 CHRNA4-207ENST00000615287 5643 ntTSL 5 BASIC11.07□□□□□ -0.64
CDC42SE1Q9NRR8 DOC2B-203ENST00000613549 6048 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Retrieved 100 of 98,524 protein–RNA pairs in 26.7 ms