Protein–RNA interactions for Protein: Q9HAW0

BRF2, Transcription factor IIIB 50 kDa subunit, humanhuman

Predictions only

Length 419 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRF2Q9HAW0 WDR86-203ENST00000469830 1691 ntTSL 2 BASIC20.5■□□□□ 0.87
BRF2Q9HAW0 YWHAZ-205ENST00000395956 2974 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
BRF2Q9HAW0 SLCO3A1-202ENST00000424469 2705 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
BRF2Q9HAW0 DRAM2-201ENST00000286692 2246 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
BRF2Q9HAW0 OPN3-201ENST00000366554 2620 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
BRF2Q9HAW0 ACSL1-205ENST00000504900 1583 ntTSL 5 BASIC20.5■□□□□ 0.87
BRF2Q9HAW0 TPTEP1-205ENST00000558085 1738 ntTSL 2 BASIC20.5■□□□□ 0.87
BRF2Q9HAW0 SIRT3-204ENST00000525319 1475 ntAPPRIS ALT2 TSL 2 BASIC20.5■□□□□ 0.87
BRF2Q9HAW0 GABBR2-201ENST00000259455 5788 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
BRF2Q9HAW0 CPEB1-218ENST00000620182 2422 ntTSL 2 BASIC20.49■□□□□ 0.87
BRF2Q9HAW0 YY1AP1-214ENST00000407221 2705 ntAPPRIS ALT2 TSL 2 BASIC20.49■□□□□ 0.87
BRF2Q9HAW0 FPGS-202ENST00000373228 1383 ntTSL 5 BASIC20.49■□□□□ 0.87
BRF2Q9HAW0 TTYH1-201ENST00000301194 2088 ntAPPRIS ALT1 TSL 1 (best) BASIC20.49■□□□□ 0.87
BRF2Q9HAW0 LAYN-201ENST00000375614 2066 ntAPPRIS P3 TSL 1 (best) BASIC20.49■□□□□ 0.87
BRF2Q9HAW0 MATK-203ENST00000395045 2073 ntAPPRIS P4 TSL 2 BASIC20.49■□□□□ 0.87
BRF2Q9HAW0 RANBP10-202ENST00000448631 2232 ntTSL 2 BASIC20.49■□□□□ 0.87
BRF2Q9HAW0 UNC119-201ENST00000301032 1653 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
BRF2Q9HAW0 GFRA3-202ENST00000378362 1837 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
BRF2Q9HAW0 EDA-201ENST00000338901 1233 ntBASIC20.49■□□□□ 0.87
BRF2Q9HAW0 CTGF-201ENST00000367976 2339 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
BRF2Q9HAW0 IRX4-207ENST00000613726 2403 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
BRF2Q9HAW0 BBC3-202ENST00000341983 1538 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
BRF2Q9HAW0 RCN2-202ENST00000394883 1366 ntTSL 5 BASIC20.48■□□□□ 0.87
BRF2Q9HAW0 SNX7-201ENST00000306121 1734 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
BRF2Q9HAW0 TBL1Y-202ENST00000355162 2376 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
BRF2Q9HAW0 LOXL1-AS1-210ENST00000567257 2358 ntTSL 2 BASIC20.48■□□□□ 0.87
BRF2Q9HAW0 FBXO25-202ENST00000350302 2229 ntAPPRIS ALT1 TSL 1 (best) BASIC20.48■□□□□ 0.87
BRF2Q9HAW0 CDKN3-207ENST00000543789 610 ntTSL 5 BASIC20.48■□□□□ 0.87
BRF2Q9HAW0 FAM174B-207ENST00000555748 866 ntAPPRIS ALT2 TSL 3 BASIC20.48■□□□□ 0.87
BRF2Q9HAW0 CHRNA7-203ENST00000454250 2093 ntAPPRIS ALT2 TSL 2 BASIC20.48■□□□□ 0.87
BRF2Q9HAW0 IQSEC3-201ENST00000382841 2701 ntAPPRIS P3 TSL 2 BASIC20.48■□□□□ 0.87
BRF2Q9HAW0 SLC26A5-209ENST00000393735 1947 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
BRF2Q9HAW0 TPST1-201ENST00000304842 2116 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
BRF2Q9HAW0 NFKBIL1-203ENST00000376148 1478 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
BRF2Q9HAW0 SETD9-211ENST00000628593 1306 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
BRF2Q9HAW0 SOCS7-202ENST00000613678 1827 ntTSL 5 BASIC20.48■□□□□ 0.87
BRF2Q9HAW0 FBXL22-201ENST00000360587 1526 ntAPPRIS P2 TSL 1 (best) BASIC20.48■□□□□ 0.87
BRF2Q9HAW0 HIRA-201ENST00000263208 4053 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
BRF2Q9HAW0 CKMT1B-207ENST00000441322 1747 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
BRF2Q9HAW0 Z98882.1-201ENST00000622160 2253 ntBASIC20.47■□□□□ 0.87
BRF2Q9HAW0 CCDC189-206ENST00000543610 1967 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
BRF2Q9HAW0 KLHL17-205ENST00000622660 1950 ntTSL 5 BASIC20.47■□□□□ 0.87
BRF2Q9HAW0 TESC-201ENST00000335209 1041 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
BRF2Q9HAW0 AC099791.1-201ENST00000416440 715 ntBASIC20.47■□□□□ 0.87
BRF2Q9HAW0 ZNF846-212ENST00000592859 1206 ntTSL 2 BASIC20.47■□□□□ 0.87
BRF2Q9HAW0 AC008764.7-201ENST00000593779 1081 ntBASIC20.47■□□□□ 0.87
BRF2Q9HAW0 GRAMD4P4-201ENST00000613563 1115 ntBASIC20.47■□□□□ 0.87
BRF2Q9HAW0 TMEM9B-205ENST00000534025 2083 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
BRF2Q9HAW0 UQCR11-203ENST00000591899 1324 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
BRF2Q9HAW0 MOGS-202ENST00000409065 2668 ntTSL 5 BASIC20.47■□□□□ 0.87
BRF2Q9HAW0 LRP5L-203ENST00000444995 1714 ntAPPRIS ALT2 TSL 5 BASIC20.47■□□□□ 0.87
BRF2Q9HAW0 GRK3-203ENST00000619906 2873 ntTSL 5 BASIC20.47■□□□□ 0.87
BRF2Q9HAW0 ADARB1-205ENST00000437626 5032 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
BRF2Q9HAW0 CCNL1-203ENST00000461804 1998 ntTSL 2 BASIC20.46■□□□□ 0.87
BRF2Q9HAW0 SEC22C-207ENST00000423701 1458 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
BRF2Q9HAW0 AL359317.1-201ENST00000556316 578 ntTSL 4 BASIC20.46■□□□□ 0.87
BRF2Q9HAW0 ACAP1-206ENST00000571471 320 ntTSL 2 BASIC20.46■□□□□ 0.87
BRF2Q9HAW0 H2AFY-217ENST00000511689 2789 ntAPPRIS P4 TSL 1 (best) BASIC20.46■□□□□ 0.87
BRF2Q9HAW0 MFF-203ENST00000349901 1716 ntTSL 2 BASIC20.46■□□□□ 0.87
BRF2Q9HAW0 AP006587.3-201ENST00000525742 1516 ntBASIC20.46■□□□□ 0.87
BRF2Q9HAW0 C18orf8-214ENST00000615148 1958 ntTSL 5 BASIC20.46■□□□□ 0.87
BRF2Q9HAW0 MEIS3-202ENST00000441740 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
BRF2Q9HAW0 FOSL1-201ENST00000312562 1669 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
BRF2Q9HAW0 LRRC75A-AS1-202ENST00000470491 1057 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
BRF2Q9HAW0 MCRIP1-205ENST00000572645 1038 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
BRF2Q9HAW0 AC110285.6-201ENST00000617652 491 ntBASIC20.45■□□□□ 0.86
BRF2Q9HAW0 AL355001.2-201ENST00000620617 1191 ntBASIC20.45■□□□□ 0.86
BRF2Q9HAW0 ZIM2-201ENST00000593711 2083 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
BRF2Q9HAW0 LINC01140-202ENST00000467438 2375 ntTSL 2 BASIC20.45■□□□□ 0.86
BRF2Q9HAW0 FBXL14-201ENST00000339235 2111 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
BRF2Q9HAW0 C19orf12-201ENST00000323670 2464 ntAPPRIS P1 TSL 2 BASIC20.45■□□□□ 0.86
BRF2Q9HAW0 ST3GAL3-207ENST00000353126 1969 ntTSL 5 BASIC20.45■□□□□ 0.86
BRF2Q9HAW0 DOK3-202ENST00000357198 1729 ntTSL 2 BASIC20.44■□□□□ 0.86
BRF2Q9HAW0 CENPS-CORT-201ENST00000400900 1469 ntTSL 2 BASIC20.44■□□□□ 0.86
BRF2Q9HAW0 AC003102.1-202ENST00000563394 1796 ntBASIC20.44■□□□□ 0.86
BRF2Q9HAW0 CLDND1-202ENST00000394180 2228 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
BRF2Q9HAW0 AP001330.3-201ENST00000520123 633 ntBASIC20.44■□□□□ 0.86
BRF2Q9HAW0 AP006621.1-201ENST00000532946 536 ntTSL 5 BASIC20.44■□□□□ 0.86
BRF2Q9HAW0 C12orf43-208ENST00000539736 1033 ntAPPRIS ALT2 TSL 2 BASIC20.44■□□□□ 0.86
BRF2Q9HAW0 DIRAS1-202ENST00000585334 774 ntAPPRIS P1 BASIC20.44■□□□□ 0.86
BRF2Q9HAW0 MADCAM1-208ENST00000621286 1203 ntAPPRIS ALT2 TSL 5 BASIC20.44■□□□□ 0.86
BRF2Q9HAW0 ATP9A-202ENST00000338821 8106 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
BRF2Q9HAW0 PSIP1-201ENST00000380715 1966 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
BRF2Q9HAW0 PXK-211ENST00000484288 2031 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
BRF2Q9HAW0 PRSS22-201ENST00000161006 1386 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
BRF2Q9HAW0 CDKN2C-203ENST00000396148 2086 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
BRF2Q9HAW0 RELL2-205ENST00000518856 1419 ntTSL 5 BASIC20.44■□□□□ 0.86
BRF2Q9HAW0 KDM3B-201ENST00000314358 6813 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
BRF2Q9HAW0 GRTP1-202ENST00000375430 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
BRF2Q9HAW0 ANKRD11-217ENST00000613312 1584 ntAPPRIS ALT2 TSL 5 BASIC20.43■□□□□ 0.86
BRF2Q9HAW0 NFS1-204ENST00000397425 1956 ntTSL 5 BASIC20.43■□□□□ 0.86
BRF2Q9HAW0 VGF-202ENST00000445482 2477 ntAPPRIS P1 TSL 5 BASIC20.43■□□□□ 0.86
BRF2Q9HAW0 ATP6AP1-201ENST00000369762 2099 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
BRF2Q9HAW0 YTHDF1-201ENST00000370334 747 ntTSL 3 BASIC20.43■□□□□ 0.86
BRF2Q9HAW0 LHPP-203ENST00000392757 840 ntTSL 3 BASIC20.43■□□□□ 0.86
BRF2Q9HAW0 C16orf86-201ENST00000403458 1267 ntAPPRIS P2 TSL 1 (best) BASIC20.43■□□□□ 0.86
BRF2Q9HAW0 GRAMD4P2-201ENST00000423297 1097 ntBASIC20.43■□□□□ 0.86
BRF2Q9HAW0 POLR2F-211ENST00000488684 564 ntTSL 2 BASIC20.43■□□□□ 0.86
BRF2Q9HAW0 AVPR2-203ENST00000370049 1307 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
BRF2Q9HAW0 CCDC130-201ENST00000221554 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Retrieved 100 of 98,524 protein–RNA pairs in 35 ms