Protein–RNA interactions for Protein: Q9H8M2

BRD9, Bromodomain-containing protein 9, humanhuman

Predictions only

Length 597 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRD9Q9H8M2 BX322557.1-202ENST00000400362 1460 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
BRD9Q9H8M2 SMAD1-201ENST00000302085 1966 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
BRD9Q9H8M2 TMEM150C-201ENST00000449862 1990 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
BRD9Q9H8M2 FXN-202ENST00000396364 980 ntTSL 5 BASIC22.16■■□□□ 1.14
BRD9Q9H8M2 C19orf81-201ENST00000425202 765 ntAPPRIS P2 TSL 5 BASIC22.16■■□□□ 1.14
BRD9Q9H8M2 AC079089.2-201ENST00000531211 1277 ntBASIC22.16■■□□□ 1.14
BRD9Q9H8M2 AC105036.2-201ENST00000569468 176 ntBASIC22.16■■□□□ 1.14
BRD9Q9H8M2 PUS1-203ENST00000443358 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC22.16■■□□□ 1.14
BRD9Q9H8M2 C21orf2-203ENST00000397956 1634 ntAPPRIS ALT2 TSL 1 (best) BASIC22.16■■□□□ 1.14
BRD9Q9H8M2 PROSER2-205ENST00000622831 1646 ntAPPRIS ALT2 TSL 1 (best) BASIC22.16■■□□□ 1.14
BRD9Q9H8M2 RBPMS2-201ENST00000300069 2008 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
BRD9Q9H8M2 TTLL11-202ENST00000373776 2012 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
BRD9Q9H8M2 AC233992.2-201ENST00000531225 1596 ntAPPRIS P1 TSL 2 BASIC22.16■■□□□ 1.14
BRD9Q9H8M2 MRPL39-201ENST00000307301 1199 ntAPPRIS ALT2 TSL 5 BASIC22.15■■□□□ 1.14
BRD9Q9H8M2 MRPL39-202ENST00000352957 1110 ntAPPRIS P3 TSL 1 (best) BASIC22.15■■□□□ 1.14
BRD9Q9H8M2 EFCAB6-202ENST00000356087 1129 ntTSL 5 BASIC22.15■■□□□ 1.14
BRD9Q9H8M2 CT47A12-201ENST00000419982 1165 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
BRD9Q9H8M2 AC069152.1-201ENST00000438030 544 ntBASIC22.15■■□□□ 1.14
BRD9Q9H8M2 CNN2P6-201ENST00000439038 900 ntBASIC22.15■■□□□ 1.14
BRD9Q9H8M2 AC010141.2-201ENST00000452426 721 ntBASIC22.15■■□□□ 1.14
BRD9Q9H8M2 AC010536.3-201ENST00000620306 533 ntBASIC22.15■■□□□ 1.14
BRD9Q9H8M2 NFE2L3P1-201ENST00000588207 1959 ntBASIC22.15■■□□□ 1.14
BRD9Q9H8M2 DLL3-201ENST00000205143 2332 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
BRD9Q9H8M2 KLC3-204ENST00000585434 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC22.15■■□□□ 1.14
BRD9Q9H8M2 PCDH1-204ENST00000503492 2373 ntTSL 5 BASIC22.14■■□□□ 1.14
BRD9Q9H8M2 LINC01816-201ENST00000414141 662 ntTSL 1 (best) BASIC22.14■■□□□ 1.13
BRD9Q9H8M2 WWTR1-AS1-203ENST00000495094 975 ntTSL 1 (best) BASIC22.14■■□□□ 1.13
BRD9Q9H8M2 SNHG6-203ENST00000520944 638 ntTSL 1 (best) BASIC22.14■■□□□ 1.13
BRD9Q9H8M2 KRT18P20-201ENST00000548986 1279 ntBASIC22.14■■□□□ 1.13
BRD9Q9H8M2 AC138907.5-202ENST00000569484 235 ntBASIC22.14■■□□□ 1.13
BRD9Q9H8M2 MCRIP1-204ENST00000570507 765 ntTSL 2 BASIC22.14■■□□□ 1.13
BRD9Q9H8M2 MCRIP1-208ENST00000575061 618 ntTSL 5 BASIC22.14■■□□□ 1.13
BRD9Q9H8M2 AC066615.1-201ENST00000640911 628 ntBASIC22.14■■□□□ 1.13
BRD9Q9H8M2 AC133041.1-202ENST00000642053 222 ntBASIC22.14■■□□□ 1.13
BRD9Q9H8M2 SPINT2-201ENST00000301244 1802 ntAPPRIS P2 TSL 1 (best) BASIC22.14■■□□□ 1.13
BRD9Q9H8M2 VPS53-211ENST00000571805 2356 ntTSL 1 (best) BASIC22.14■■□□□ 1.13
BRD9Q9H8M2 AVPI1-201ENST00000370626 1457 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
BRD9Q9H8M2 NAT16-204ENST00000455377 1492 ntAPPRIS P2 TSL 1 (best) BASIC22.14■■□□□ 1.13
BRD9Q9H8M2 SIAH2-201ENST00000312960 2517 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
BRD9Q9H8M2 AP004607.7-201ENST00000527152 1677 ntBASIC22.14■■□□□ 1.13
BRD9Q9H8M2 ADGRB1-202ENST00000517894 6241 ntAPPRIS P1 TSL 5 BASIC22.13■■□□□ 1.13
BRD9Q9H8M2 XXYLT1-202ENST00000356740 564 ntTSL 2 BASIC22.13■■□□□ 1.13
BRD9Q9H8M2 AL390816.2-201ENST00000554252 737 ntTSL 3 BASIC22.13■■□□□ 1.13
BRD9Q9H8M2 AC110285.4-201ENST00000572590 424 ntTSL 3 BASIC22.13■■□□□ 1.13
BRD9Q9H8M2 AC133552.2-202ENST00000575694 574 ntBASIC22.13■■□□□ 1.13
BRD9Q9H8M2 MSANTD3-207ENST00000622639 1748 ntAPPRIS P1 TSL 3 BASIC22.13■■□□□ 1.13
BRD9Q9H8M2 GBX2-201ENST00000306318 2123 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
BRD9Q9H8M2 LINC01960-201ENST00000563759 1884 ntBASIC22.13■■□□□ 1.13
BRD9Q9H8M2 MFSD7-203ENST00000404286 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC22.13■■□□□ 1.13
BRD9Q9H8M2 SIRT3-202ENST00000524564 1395 ntTSL 2 BASIC22.12■■□□□ 1.13
BRD9Q9H8M2 CD8B-205ENST00000393761 932 ntTSL 1 (best) BASIC22.12■■□□□ 1.13
BRD9Q9H8M2 CD8B-206ENST00000431506 692 ntAPPRIS ALT2 TSL 5 BASIC22.12■■□□□ 1.13
BRD9Q9H8M2 HTATIP2-208ENST00000532505 595 ntTSL 2 BASIC22.12■■□□□ 1.13
BRD9Q9H8M2 CD99-212ENST00000624481 1089 ntAPPRIS ALT2 TSL 2 BASIC22.12■■□□□ 1.13
BRD9Q9H8M2 CBWD6-201ENST00000377391 1792 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
BRD9Q9H8M2 FJX1-201ENST00000317811 2450 ntAPPRIS P1 BASIC22.12■■□□□ 1.13
BRD9Q9H8M2 CTBP1-203ENST00000382952 2467 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
BRD9Q9H8M2 AMZ2-202ENST00000359904 2402 ntAPPRIS P1 TSL 2 BASIC22.11■■□□□ 1.13
BRD9Q9H8M2 ABHD6-205ENST00000478253 2482 ntAPPRIS P1 TSL 2 BASIC22.11■■□□□ 1.13
BRD9Q9H8M2 MAP1LC3A-202ENST00000374837 961 ntTSL 3 BASIC22.11■■□□□ 1.13
BRD9Q9H8M2 FAM201B-201ENST00000458407 597 ntBASIC22.11■■□□□ 1.13
BRD9Q9H8M2 COL19A1-203ENST00000478620 589 ntTSL 1 (best) BASIC22.11■■□□□ 1.13
BRD9Q9H8M2 DHRS4-207ENST00000559632 1003 ntTSL 1 (best) BASIC22.11■■□□□ 1.13
BRD9Q9H8M2 LIMD2-202ENST00000578061 756 ntAPPRIS P1 TSL 2 BASIC22.11■■□□□ 1.13
BRD9Q9H8M2 MIR4651-201ENST00000582622 73 ntBASIC22.11■■□□□ 1.13
BRD9Q9H8M2 RAPSN-205ENST00000529341 1408 ntTSL 1 (best) BASIC22.11■■□□□ 1.13
BRD9Q9H8M2 VGLL2-201ENST00000326274 2212 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
BRD9Q9H8M2 PICK1-202ENST00000404072 2164 ntAPPRIS P1 TSL 2 BASIC22.11■■□□□ 1.13
BRD9Q9H8M2 TMEM268-202ENST00000374049 4578 ntAPPRIS ALT1 TSL 5 BASIC22.11■■□□□ 1.13
BRD9Q9H8M2 KCNS1-202ENST00000537075 2136 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
BRD9Q9H8M2 PNLIPRP2-204ENST00000591655 1456 ntAPPRIS ALT1 TSL 5 BASIC22.1■■□□□ 1.13
BRD9Q9H8M2 IRX5-201ENST00000320990 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC22.1■■□□□ 1.13
BRD9Q9H8M2 COX5B-201ENST00000258424 712 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
BRD9Q9H8M2 MSRB1-201ENST00000361871 1423 ntAPPRIS P2 TSL 1 (best) BASIC22.1■■□□□ 1.13
BRD9Q9H8M2 MCHR1-202ENST00000381433 1219 ntTSL 1 (best) BASIC22.1■■□□□ 1.13
BRD9Q9H8M2 BMP1-204ENST00000397814 836 ntTSL 4 BASIC22.1■■□□□ 1.13
BRD9Q9H8M2 RPL29-204ENST00000479017 670 ntAPPRIS P1 TSL 3 BASIC22.1■■□□□ 1.13
BRD9Q9H8M2 AC099522.1-201ENST00000505955 881 ntTSL 3 BASIC22.1■■□□□ 1.13
BRD9Q9H8M2 NDUFB10-204ENST00000569148 628 ntTSL 2 BASIC22.1■■□□□ 1.13
BRD9Q9H8M2 HOXA10-206ENST00000613671 2175 ntTSL 5 BASIC22.1■■□□□ 1.13
BRD9Q9H8M2 CCM2L-201ENST00000262659 2523 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
BRD9Q9H8M2 FAIM-201ENST00000338446 1622 ntTSL 5 BASIC22.09■■□□□ 1.13
BRD9Q9H8M2 RABEP2-201ENST00000357573 2175 ntTSL 1 (best) BASIC22.09■■□□□ 1.13
BRD9Q9H8M2 GRIN2D-201ENST00000263269 5093 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
BRD9Q9H8M2 TRAPPC5-201ENST00000317378 790 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
BRD9Q9H8M2 FNDC11-201ENST00000370097 1119 ntAPPRIS P1 TSL 2 BASIC22.09■■□□□ 1.13
BRD9Q9H8M2 APTR-203ENST00000430801 583 ntTSL 5 BASIC22.09■■□□□ 1.13
BRD9Q9H8M2 AC008443.6-201ENST00000512508 500 ntTSL 4 BASIC22.09■■□□□ 1.13
BRD9Q9H8M2 FADS3-204ENST00000525588 1254 ntTSL 5 BASIC22.09■■□□□ 1.13
BRD9Q9H8M2 MAGIX-202ENST00000595224 1238 ntAPPRIS P2 TSL 5 BASIC22.09■■□□□ 1.13
BRD9Q9H8M2 RCN2-201ENST00000320963 1750 ntTSL 5 BASIC22.09■■□□□ 1.13
BRD9Q9H8M2 PCK2-201ENST00000216780 2357 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
BRD9Q9H8M2 NPY4R-201ENST00000374312 1956 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
BRD9Q9H8M2 NPY4R2-201ENST00000576178 1956 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
BRD9Q9H8M2 SPRTN-201ENST00000008440 1667 ntTSL 2 BASIC22.08■■□□□ 1.13
BRD9Q9H8M2 NAT8L-202ENST00000423729 5870 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
BRD9Q9H8M2 FMR1-AS1-201ENST00000594922 2005 ntTSL 1 (best) BASIC22.08■■□□□ 1.13
BRD9Q9H8M2 FAM207A-201ENST00000291634 927 ntAPPRIS P3 TSL 1 (best) BASIC22.08■■□□□ 1.13
BRD9Q9H8M2 SBK2-201ENST00000344158 1056 ntAPPRIS P1 TSL 2 BASIC22.08■■□□□ 1.13
BRD9Q9H8M2 SBK2-202ENST00000413299 1085 ntAPPRIS P1 TSL 5 BASIC22.08■■□□□ 1.13
Retrieved 100 of 98,524 protein–RNA pairs in 26.3 ms