Protein–RNA interactions for Protein: Q9H788

SH2D4A, SH2 domain-containing protein 4A, humanhuman

Predictions only

Length 454 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SH2D4AQ9H788 IRX5-201ENST00000320990 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC25.01■■□□□ 1.59
SH2D4AQ9H788 HOXA10-206ENST00000613671 2175 ntTSL 5 BASIC25.01■■□□□ 1.59
SH2D4AQ9H788 TBXA2R-202ENST00000411851 1494 ntTSL 2 BASIC25.01■■□□□ 1.59
SH2D4AQ9H788 AC074143.1-203ENST00000518227 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC25.01■■□□□ 1.59
SH2D4AQ9H788 LSR-204ENST00000361790 2210 ntAPPRIS P4 TSL 1 (best) BASIC25.01■■□□□ 1.59
SH2D4AQ9H788 PTPN13-205ENST00000502971 1708 ntTSL 1 (best) BASIC25■■□□□ 1.59
SH2D4AQ9H788 AC087742.1-201ENST00000575880 1738 ntBASIC25■■□□□ 1.59
SH2D4AQ9H788 PACRGL-227ENST00000513459 1773 ntTSL 5 BASIC25■■□□□ 1.59
SH2D4AQ9H788 BTBD7-205ENST00000554565 2697 ntTSL 1 (best) BASIC25■■□□□ 1.59
SH2D4AQ9H788 SLC25A11-201ENST00000225665 1897 ntAPPRIS P1 TSL 1 (best) BASIC25■■□□□ 1.59
SH2D4AQ9H788 AC137767.1-201ENST00000602918 1920 ntBASIC25■■□□□ 1.59
SH2D4AQ9H788 SNRNP25-202ENST00000383018 1085 ntAPPRIS P2 TSL 1 (best) BASIC25■■□□□ 1.59
SH2D4AQ9H788 MIR663A-201ENST00000385250 93 ntBASIC25■■□□□ 1.59
SH2D4AQ9H788 KANSL1-AS1-201ENST00000398275 517 ntTSL 1 (best) BASIC25■■□□□ 1.59
SH2D4AQ9H788 AL645608.9-201ENST00000442292 829 ntTSL 1 (best) BASIC25■■□□□ 1.59
SH2D4AQ9H788 BX890604.1-207ENST00000486571 904 ntTSL 5 BASIC25■■□□□ 1.59
SH2D4AQ9H788 AC016888.1-201ENST00000585285 565 ntTSL 3 BASIC25■■□□□ 1.59
SH2D4AQ9H788 MBD3L1-202ENST00000595891 872 ntAPPRIS P1 TSL 2 BASIC25■■□□□ 1.59
SH2D4AQ9H788 TRAPPC3-208ENST00000616074 1114 ntTSL 5 BASIC25■■□□□ 1.59
SH2D4AQ9H788 ADA-201ENST00000372874 1539 ntAPPRIS P1 TSL 1 (best) BASIC25■■□□□ 1.59
SH2D4AQ9H788 QPCT-201ENST00000338415 1739 ntAPPRIS P1 TSL 1 (best) BASIC25■■□□□ 1.59
SH2D4AQ9H788 ASPSCR1-202ENST00000306739 1843 ntAPPRIS P3 TSL 1 (best) BASIC25■■□□□ 1.59
SH2D4AQ9H788 GRK4-206ENST00000504933 1971 ntTSL 1 (best) BASIC25■■□□□ 1.59
SH2D4AQ9H788 NFE2L3P1-201ENST00000588207 1959 ntBASIC25■■□□□ 1.59
SH2D4AQ9H788 HYAL2-207ENST00000442581 2318 ntAPPRIS P1 TSL 2 BASIC25■■□□□ 1.59
SH2D4AQ9H788 RANBP10-206ENST00000602677 2374 ntTSL 5 BASIC25■■□□□ 1.59
SH2D4AQ9H788 CITED1-201ENST00000246139 1231 ntAPPRIS P3 TSL 1 (best) BASIC24.99■■□□□ 1.59
SH2D4AQ9H788 GGTLC1-202ENST00000286890 1028 ntAPPRIS P1 TSL 1 (best) BASIC24.99■■□□□ 1.59
SH2D4AQ9H788 C16orf72-201ENST00000327827 5953 ntAPPRIS P1 TSL 1 (best) BASIC24.99■■□□□ 1.59
SH2D4AQ9H788 TNFRSF18-201ENST00000328596 851 ntAPPRIS P4 TSL 1 (best) BASIC24.99■■□□□ 1.59
SH2D4AQ9H788 AVPR2-201ENST00000337474 1622 ntAPPRIS P1 TSL 1 (best) BASIC24.99■■□□□ 1.59
SH2D4AQ9H788 ZFAND4-205ENST00000374371 2283 ntTSL 5 BASIC24.99■■□□□ 1.59
SH2D4AQ9H788 MPV17L-202ENST00000396385 1037 ntAPPRIS P1 TSL 1 (best) BASIC24.99■■□□□ 1.59
SH2D4AQ9H788 DTNB-211ENST00000407661 2420 ntAPPRIS ALT1 TSL 1 (best) BASIC24.99■■□□□ 1.59
SH2D4AQ9H788 LINC01816-201ENST00000414141 662 ntTSL 1 (best) BASIC24.99■■□□□ 1.59
SH2D4AQ9H788 CMTM8-202ENST00000458535 996 ntTSL 1 (best) BASIC24.99■■□□□ 1.59
SH2D4AQ9H788 ZNF561-AS1-205ENST00000588765 579 ntTSL 4 BASIC24.99■■□□□ 1.59
SH2D4AQ9H788 SGMS1-210ENST00000619438 1680 ntTSL 5 BASIC24.99■■□□□ 1.59
SH2D4AQ9H788 MAL2-204ENST00000614891 2818 ntAPPRIS P1 TSL 1 (best) BASIC24.99■■□□□ 1.59
SH2D4AQ9H788 ALG1L9P-201ENST00000508969 2165 ntTSL 1 (best) BASIC24.98■■□□□ 1.59
SH2D4AQ9H788 KCNS1-202ENST00000537075 2136 ntAPPRIS P1 TSL 1 (best) BASIC24.98■■□□□ 1.59
SH2D4AQ9H788 KCNIP1-201ENST00000328939 2014 ntAPPRIS P1 TSL 1 (best) BASIC24.98■■□□□ 1.59
SH2D4AQ9H788 GPR143-203ENST00000467482 1762 ntAPPRIS P1 TSL 1 (best) BASIC24.98■■□□□ 1.59
SH2D4AQ9H788 WRAP73-201ENST00000270708 1665 ntAPPRIS P1 TSL 1 (best) BASIC24.98■■□□□ 1.59
SH2D4AQ9H788 IFNGR2-203ENST00000405436 1684 ntTSL 5 BASIC24.98■■□□□ 1.59
SH2D4AQ9H788 EFCAB6-202ENST00000356087 1129 ntTSL 5 BASIC24.98■■□□□ 1.59
SH2D4AQ9H788 HERC2P5-204ENST00000569697 1214 ntTSL 2 BASIC24.98■■□□□ 1.59
SH2D4AQ9H788 PARD6A-203ENST00000602551 1171 ntTSL 5 BASIC24.98■■□□□ 1.59
SH2D4AQ9H788 FNDC5-207ENST00000640867 639 ntAPPRIS P2 TSL 2 BASIC24.98■■□□□ 1.59
SH2D4AQ9H788 DACT3-201ENST00000300875 2526 ntTSL 1 (best) BASIC24.98■■□□□ 1.59
SH2D4AQ9H788 AMZ2-202ENST00000359904 2402 ntAPPRIS P1 TSL 2 BASIC24.97■■□□□ 1.59
SH2D4AQ9H788 CACNG2-201ENST00000300105 2384 ntAPPRIS P1 TSL 1 (best) BASIC24.97■■□□□ 1.59
SH2D4AQ9H788 HSF4-215ENST00000521374 1515 ntAPPRIS P1 TSL 1 (best) BASIC24.97■■□□□ 1.59
SH2D4AQ9H788 MAPK9-206ENST00000425491 2266 ntTSL 5 BASIC24.97■■□□□ 1.59
SH2D4AQ9H788 ECHDC2-221ENST00000536120 1446 ntTSL 3 BASIC24.97■■□□□ 1.59
SH2D4AQ9H788 LGALS9B-201ENST00000324290 1243 ntAPPRIS P2 TSL 5 BASIC24.97■■□□□ 1.59
SH2D4AQ9H788 NCF1B-203ENST00000435988 1254 ntBASIC24.97■■□□□ 1.59
SH2D4AQ9H788 AC037459.4-201ENST00000517384 585 ntTSL 4 BASIC24.97■■□□□ 1.59
SH2D4AQ9H788 FAM43A-201ENST00000329759 2494 ntAPPRIS P1 BASIC24.97■■□□□ 1.59
SH2D4AQ9H788 PCDH1-204ENST00000503492 2373 ntTSL 5 BASIC24.97■■□□□ 1.59
SH2D4AQ9H788 CCZ1B-201ENST00000316731 2885 ntAPPRIS P1 TSL 1 (best) BASIC24.97■■□□□ 1.59
SH2D4AQ9H788 GPIHBP1-201ENST00000622500 2282 ntAPPRIS P1 TSL 1 (best) BASIC24.97■■□□□ 1.59
SH2D4AQ9H788 DPP7-201ENST00000371579 1590 ntAPPRIS P1 TSL 1 (best) BASIC24.97■■□□□ 1.59
SH2D4AQ9H788 MSRB1-201ENST00000361871 1423 ntAPPRIS P2 TSL 1 (best) BASIC24.96■■□□□ 1.59
SH2D4AQ9H788 A1BG-201ENST00000263100 1722 ntAPPRIS P1 TSL 1 (best) BASIC24.96■■□□□ 1.59
SH2D4AQ9H788 MOB2-201ENST00000329957 1207 ntAPPRIS P1 TSL 2 BASIC24.96■■□□□ 1.59
SH2D4AQ9H788 C19orf73-201ENST00000408991 744 ntAPPRIS P1 BASIC24.96■■□□□ 1.59
SH2D4AQ9H788 MAP2K4P1-201ENST00000438453 1195 ntBASIC24.96■■□□□ 1.59
SH2D4AQ9H788 CALM1-202ENST00000447653 1104 ntAPPRIS ALT1 TSL 2 BASIC24.96■■□□□ 1.59
SH2D4AQ9H788 HMX1-202ENST00000506970 651 ntTSL 1 (best) BASIC24.96■■□□□ 1.59
SH2D4AQ9H788 BRI3-207ENST00000539286 699 ntTSL 2 BASIC24.96■■□□□ 1.59
SH2D4AQ9H788 AC104771.1-201ENST00000603335 964 ntBASIC24.96■■□□□ 1.59
SH2D4AQ9H788 PNRC1-201ENST00000336032 2065 ntAPPRIS P1 TSL 1 (best) BASIC24.96■■□□□ 1.59
SH2D4AQ9H788 USP21-202ENST00000368001 2095 ntTSL 1 (best) BASIC24.96■■□□□ 1.59
SH2D4AQ9H788 ADRM1-204ENST00000491935 1530 ntAPPRIS P1 TSL 5 BASIC24.96■■□□□ 1.59
SH2D4AQ9H788 IRF2BP1-201ENST00000302165 2564 ntAPPRIS P1 BASIC24.96■■□□□ 1.59
SH2D4AQ9H788 USP45-202ENST00000329966 1444 ntTSL 1 (best) BASIC24.95■■□□□ 1.59
SH2D4AQ9H788 RAB28-203ENST00000338176 1787 ntTSL 3 BASIC24.95■■□□□ 1.59
SH2D4AQ9H788 AQP6-201ENST00000315520 1398 ntAPPRIS P1 TSL 1 (best) BASIC24.95■■□□□ 1.59
SH2D4AQ9H788 SMPD5-201ENST00000528912 1390 ntTSL 5 BASIC24.95■■□□□ 1.59
SH2D4AQ9H788 CD58-203ENST00000457047 1328 ntAPPRIS ALT2 TSL 1 (best) BASIC24.95■■□□□ 1.58
SH2D4AQ9H788 KLHL36-201ENST00000258157 1974 ntTSL 1 (best) BASIC24.95■■□□□ 1.58
SH2D4AQ9H788 RAX-201ENST00000256852 2935 ntTSL 1 (best) BASIC24.95■■□□□ 1.58
SH2D4AQ9H788 CEACAM4-201ENST00000221954 1205 ntAPPRIS P2 TSL 1 (best) BASIC24.95■■□□□ 1.58
SH2D4AQ9H788 AC007322.1-201ENST00000426983 750 ntBASIC24.95■■□□□ 1.58
SH2D4AQ9H788 TSPAN11-202ENST00000535215 988 ntTSL 2 BASIC24.95■■□□□ 1.58
SH2D4AQ9H788 DUX4L16-201ENST00000555130 1264 ntBASIC24.95■■□□□ 1.58
SH2D4AQ9H788 EEF1DP3-203ENST00000566025 782 ntBASIC24.95■■□□□ 1.58
SH2D4AQ9H788 AC005697.1-201ENST00000582441 582 ntAPPRIS P1 TSL 4 BASIC24.95■■□□□ 1.58
SH2D4AQ9H788 CEACAM4-203ENST00000600925 899 ntAPPRIS ALT2 TSL 2 BASIC24.95■■□□□ 1.58
SH2D4AQ9H788 AC053503.5-201ENST00000601508 636 ntBASIC24.95■■□□□ 1.58
SH2D4AQ9H788 ARFRP1-202ENST00000607873 1061 ntTSL 2 BASIC24.95■■□□□ 1.58
SH2D4AQ9H788 AL161421.1-201ENST00000619666 1101 ntTSL 1 (best) BASIC24.95■■□□□ 1.58
SH2D4AQ9H788 SUMF1-201ENST00000272902 2159 ntAPPRIS P1 TSL 1 (best) BASIC24.95■■□□□ 1.58
SH2D4AQ9H788 RABEP2-201ENST00000357573 2175 ntTSL 1 (best) BASIC24.95■■□□□ 1.58
SH2D4AQ9H788 RNF4-207ENST00000506706 2098 ntAPPRIS P1 TSL 1 (best) BASIC24.95■■□□□ 1.58
SH2D4AQ9H788 AC079328.2-202ENST00000560903 1410 ntTSL 1 (best) BASIC24.95■■□□□ 1.58
SH2D4AQ9H788 KLC1-201ENST00000246489 2294 ntAPPRIS P1 TSL 5 BASIC24.95■■□□□ 1.58
SH2D4AQ9H788 KLC1-224ENST00000557450 2265 ntTSL 5 BASIC24.95■■□□□ 1.58
SH2D4AQ9H788 DPF1-206ENST00000420980 2227 ntTSL 1 (best) BASIC24.94■■□□□ 1.58
Retrieved 100 of 98,524 protein–RNA pairs in 21.6 ms