Protein–RNA interactions for Protein: Q9H4D5

NXF3, Nuclear RNA export factor 3, humanhuman

Known RBP Predictions only

Length 531 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NXF3Q9H4D5 CPED1-202ENST00000340646 1056 ntTSL 5 BASIC23.21■■□□□ 1.31
NXF3Q9H4D5 FDX2-202ENST00000393708 1012 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
NXF3Q9H4D5 CALM1-202ENST00000447653 1104 ntAPPRIS ALT1 TSL 2 BASIC23.21■■□□□ 1.31
NXF3Q9H4D5 ZNF717-203ENST00000477374 1169 ntTSL 2 BASIC23.21■■□□□ 1.31
NXF3Q9H4D5 AC044860.1-203ENST00000560811 844 ntTSL 3 BASIC23.21■■□□□ 1.31
NXF3Q9H4D5 SNAP23-214ENST00000567094 834 ntTSL 3 BASIC23.21■■□□□ 1.31
NXF3Q9H4D5 AC079328.2-202ENST00000560903 1410 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
NXF3Q9H4D5 NOC4L-201ENST00000330579 1632 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
NXF3Q9H4D5 SEPT5-210ENST00000455784 2070 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
NXF3Q9H4D5 PLPP5-209ENST00000529359 2185 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
NXF3Q9H4D5 C18orf65-201ENST00000622985 2076 ntTSL 2 BASIC23.2■■□□□ 1.3
NXF3Q9H4D5 SH2D5-202ENST00000444387 1934 ntAPPRIS P1 TSL 2 BASIC23.2■■□□□ 1.3
NXF3Q9H4D5 KLF3-203ENST00000514033 1871 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
NXF3Q9H4D5 UCHL5-205ENST00000367454 1815 ntAPPRIS ALT1 TSL 1 (best) BASIC23.2■■□□□ 1.3
NXF3Q9H4D5 CBWD6-213ENST00000613716 1820 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
NXF3Q9H4D5 TLE3-216ENST00000559191 1575 ntTSL 5 BASIC23.2■■□□□ 1.3
NXF3Q9H4D5 POLE4-205ENST00000483063 1248 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
NXF3Q9H4D5 ABHD14A-204ENST00000491470 674 ntTSL 3 BASIC23.2■■□□□ 1.3
NXF3Q9H4D5 AC092143.4-201ENST00000570217 559 ntTSL 4 BASIC23.2■■□□□ 1.3
NXF3Q9H4D5 C19orf84-201ENST00000570516 788 ntAPPRIS ALT2 TSL 1 (best) BASIC23.2■■□□□ 1.3
NXF3Q9H4D5 LINC02091-201ENST00000576171 1185 ntTSL 5 BASIC23.2■■□□□ 1.3
NXF3Q9H4D5 FAM71E1-204ENST00000600100 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC23.2■■□□□ 1.3
NXF3Q9H4D5 KLC1-205ENST00000380038 2322 ntTSL 2 BASIC23.2■■□□□ 1.3
NXF3Q9H4D5 SPNS1-207ENST00000565975 1979 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
NXF3Q9H4D5 HEXB-201ENST00000261416 1901 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
NXF3Q9H4D5 CFAP99-206ENST00000616117 1941 ntAPPRIS P1 TSL 5 BASIC23.2■■□□□ 1.3
NXF3Q9H4D5 IFNGR2-203ENST00000405436 1684 ntTSL 5 BASIC23.19■■□□□ 1.3
NXF3Q9H4D5 LSM14B-201ENST00000279068 2548 ntAPPRIS P1 TSL 5 BASIC23.19■■□□□ 1.3
NXF3Q9H4D5 RDX-204ENST00000528498 2511 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
NXF3Q9H4D5 RASSF10-201ENST00000529419 2530 ntAPPRIS P1 BASIC23.19■■□□□ 1.3
NXF3Q9H4D5 ABHD6-201ENST00000295962 2393 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
NXF3Q9H4D5 EFNA2-201ENST00000215368 949 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
NXF3Q9H4D5 AC010141.2-201ENST00000452426 721 ntBASIC23.19■■□□□ 1.3
NXF3Q9H4D5 ST7L-201ENST00000343210 1866 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
NXF3Q9H4D5 LHX2-201ENST00000373615 2554 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
NXF3Q9H4D5 SLC41A3-201ENST00000315891 1797 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
NXF3Q9H4D5 PACRGL-227ENST00000513459 1773 ntTSL 5 BASIC23.19■■□□□ 1.3
NXF3Q9H4D5 MIR222HG-202ENST00000602507 1758 ntTSL 5 BASIC23.19■■□□□ 1.3
NXF3Q9H4D5 KCNH6-203ENST00000580652 1703 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
NXF3Q9H4D5 ALDH5A1-204ENST00000491546 1699 ntTSL 5 BASIC23.19■■□□□ 1.3
NXF3Q9H4D5 HAUS4-201ENST00000206474 1642 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
NXF3Q9H4D5 ACSF2-203ENST00000502667 2098 ntTSL 2 BASIC23.18■■□□□ 1.3
NXF3Q9H4D5 DCPS-201ENST00000263579 1479 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
NXF3Q9H4D5 PNKP-201ENST00000322344 2041 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
NXF3Q9H4D5 CAMKK2-208ENST00000412367 2006 ntAPPRIS ALT2 TSL 1 (best) BASIC23.18■■□□□ 1.3
NXF3Q9H4D5 PRKAA1-202ENST00000354209 1918 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
NXF3Q9H4D5 PARP1-202ENST00000366792 553 ntTSL 3 BASIC23.18■■□□□ 1.3
NXF3Q9H4D5 ID1-201ENST00000376105 1233 ntBASIC23.18■■□□□ 1.3
NXF3Q9H4D5 SNRNP25-202ENST00000383018 1085 ntAPPRIS P2 TSL 1 (best) BASIC23.18■■□□□ 1.3
NXF3Q9H4D5 AC026185.1-201ENST00000445748 174 ntBASIC23.18■■□□□ 1.3
NXF3Q9H4D5 AL731577.2-201ENST00000508096 555 ntTSL 2 BASIC23.18■■□□□ 1.3
NXF3Q9H4D5 Z97986.1-201ENST00000565879 476 ntTSL 5 BASIC23.18■■□□□ 1.3
NXF3Q9H4D5 Z97653.1-201ENST00000567096 446 ntTSL 3 BASIC23.18■■□□□ 1.3
NXF3Q9H4D5 AC138907.5-202ENST00000569484 235 ntBASIC23.18■■□□□ 1.3
NXF3Q9H4D5 RAB28-203ENST00000338176 1787 ntTSL 3 BASIC23.18■■□□□ 1.3
NXF3Q9H4D5 VPS29-206ENST00000549578 1523 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
NXF3Q9H4D5 ASB6-201ENST00000277458 2330 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
NXF3Q9H4D5 DONSON-210ENST00000453626 2332 ntTSL 5 BASIC23.17■■□□□ 1.3
NXF3Q9H4D5 DMRT2-209ENST00000635183 2190 ntTSL 5 BASIC23.17■■□□□ 1.3
NXF3Q9H4D5 STX5-201ENST00000294179 1794 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
NXF3Q9H4D5 CSNK1G3-206ENST00000511130 1356 ntTSL 2 BASIC23.17■■□□□ 1.3
NXF3Q9H4D5 TARSL2-207ENST00000615656 2356 ntAPPRIS ALT2 TSL 5 BASIC23.17■■□□□ 1.3
NXF3Q9H4D5 LYRM9-201ENST00000379102 501 ntAPPRIS P1 TSL 2 BASIC23.17■■□□□ 1.3
NXF3Q9H4D5 IL15RA-207ENST00000397250 584 ntTSL 2 BASIC23.17■■□□□ 1.3
NXF3Q9H4D5 LYRM9-206ENST00000508862 807 ntTSL 3 BASIC23.17■■□□□ 1.3
NXF3Q9H4D5 IL15RA-215ENST00000528354 1037 ntTSL 2 BASIC23.17■■□□□ 1.3
NXF3Q9H4D5 TK2-208ENST00000545043 1120 ntTSL 2 BASIC23.17■■□□□ 1.3
NXF3Q9H4D5 EEF1DP3-203ENST00000566025 782 ntBASIC23.17■■□□□ 1.3
NXF3Q9H4D5 ZNF561-AS1-205ENST00000588765 579 ntTSL 4 BASIC23.17■■□□□ 1.3
NXF3Q9H4D5 IL15RA-220ENST00000620345 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC23.17■■□□□ 1.3
NXF3Q9H4D5 ZCCHC2-201ENST00000269499 5959 ntAPPRIS P2 TSL 5 BASIC23.17■■□□□ 1.3
NXF3Q9H4D5 MIR210HG-201ENST00000500447 1965 ntTSL 2 BASIC23.17■■□□□ 1.3
NXF3Q9H4D5 THRA-201ENST00000264637 2538 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
NXF3Q9H4D5 FRMD8-203ENST00000416776 1818 ntTSL 2 BASIC23.17■■□□□ 1.3
NXF3Q9H4D5 SLC52A2-211ENST00000532887 2147 ntAPPRIS P1 TSL 5 BASIC23.17■■□□□ 1.3
NXF3Q9H4D5 AC127496.7-201ENST00000625110 1798 ntBASIC23.17■■□□□ 1.3
NXF3Q9H4D5 ALKBH7-201ENST00000245812 1332 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
NXF3Q9H4D5 DCXR-201ENST00000306869 887 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
NXF3Q9H4D5 RHOD-201ENST00000308831 1129 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
NXF3Q9H4D5 TRIQK-221ENST00000524107 737 ntAPPRIS P1 TSL 3 BASIC23.16■■□□□ 1.3
NXF3Q9H4D5 TMEM41B-205ENST00000533723 723 ntTSL 2 BASIC23.16■■□□□ 1.3
NXF3Q9H4D5 NCK2-201ENST00000233154 2683 ntAPPRIS P1 TSL 5 BASIC23.16■■□□□ 1.3
NXF3Q9H4D5 ADA-201ENST00000372874 1539 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
NXF3Q9H4D5 ARRDC2-202ENST00000379656 2528 ntTSL 2 BASIC23.16■■□□□ 1.3
NXF3Q9H4D5 NKX6-3-202ENST00000524115 1683 ntTSL 2 BASIC23.16■■□□□ 1.3
NXF3Q9H4D5 SNX21-212ENST00000491381 1607 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
NXF3Q9H4D5 LINC01184-201ENST00000499346 1380 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
NXF3Q9H4D5 ARHGEF9-204ENST00000374878 2217 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
NXF3Q9H4D5 H2AFY2-201ENST00000373255 1980 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
NXF3Q9H4D5 EFCAB6-202ENST00000356087 1129 ntTSL 5 BASIC23.15■■□□□ 1.3
NXF3Q9H4D5 CROCCP5-201ENST00000436658 830 ntBASIC23.15■■□□□ 1.3
NXF3Q9H4D5 AC110285.4-201ENST00000572590 424 ntTSL 3 BASIC23.15■■□□□ 1.3
NXF3Q9H4D5 AC016888.1-201ENST00000585285 565 ntTSL 3 BASIC23.15■■□□□ 1.3
NXF3Q9H4D5 DM1-AS-203ENST00000590076 730 ntTSL 4 BASIC23.15■■□□□ 1.3
NXF3Q9H4D5 MYCNOS-205ENST00000641950 531 ntBASIC23.15■■□□□ 1.3
NXF3Q9H4D5 DHRS2-202ENST00000344777 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC23.15■■□□□ 1.3
NXF3Q9H4D5 MAPKAPK5-AS1-201ENST00000428207 2290 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
NXF3Q9H4D5 NOX4-209ENST00000527626 1774 ntTSL 2 BASIC23.14■■□□□ 1.3
NXF3Q9H4D5 LOXL1-201ENST00000261921 2351 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.3
NXF3Q9H4D5 NPEPL1-201ENST00000356091 2378 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.3
Retrieved 100 of 98,524 protein–RNA pairs in 41.2 ms