Protein–RNA interactions for Protein: Q9C0I3

CCSER1, Serine-rich coiled-coil domain-containing protein 1, humanhuman

Predictions only

Length 900 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCSER1Q9C0I3 FEZ1-205ENST00000524435 750 ntTSL 2 BASIC24.04■■□□□ 1.44
CCSER1Q9C0I3 AC142381.2-201ENST00000566120 298 ntBASIC24.04■■□□□ 1.44
CCSER1Q9C0I3 COL8A2-203ENST00000481785 2036 ntTSL 1 (best) BASIC24.04■■□□□ 1.44
CCSER1Q9C0I3 ZNF511-202ENST00000361518 1520 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
CCSER1Q9C0I3 SYNGR2-201ENST00000225777 2325 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
CCSER1Q9C0I3 MPPED1-203ENST00000443721 2507 ntAPPRIS P1 TSL 2 BASIC24.04■■□□□ 1.44
CCSER1Q9C0I3 FXYD7-201ENST00000270310 712 ntAPPRIS P2 TSL 1 (best) BASIC24.03■■□□□ 1.44
CCSER1Q9C0I3 ZFAS1-206ENST00000450535 1075 ntTSL 3 BASIC24.03■■□□□ 1.44
CCSER1Q9C0I3 LRP5L-203ENST00000444995 1714 ntAPPRIS ALT2 TSL 5 BASIC24.03■■□□□ 1.44
CCSER1Q9C0I3 PPP2R5E-204ENST00000555899 2164 ntAPPRIS ALT1 TSL 1 (best) BASIC24.03■■□□□ 1.44
CCSER1Q9C0I3 IRX4-207ENST00000613726 2403 ntTSL 1 (best) BASIC24.03■■□□□ 1.44
CCSER1Q9C0I3 PDXK-205ENST00000398081 2251 ntTSL 2 BASIC24.03■■□□□ 1.44
CCSER1Q9C0I3 LAYN-201ENST00000375614 2066 ntAPPRIS P3 TSL 1 (best) BASIC24.03■■□□□ 1.44
CCSER1Q9C0I3 LCK-214ENST00000619559 2099 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
CCSER1Q9C0I3 TPST1-201ENST00000304842 2116 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
CCSER1Q9C0I3 SPIRE2-202ENST00000393062 2172 ntAPPRIS ALT2 TSL 1 (best) BASIC24.02■■□□□ 1.44
CCSER1Q9C0I3 RNPEP-201ENST00000295640 2427 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
CCSER1Q9C0I3 NFKBIL1-203ENST00000376148 1478 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
CCSER1Q9C0I3 AC003102.1-202ENST00000563394 1796 ntBASIC24.02■■□□□ 1.44
CCSER1Q9C0I3 CDKN2D-201ENST00000335766 1086 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
CCSER1Q9C0I3 STOML2-201ENST00000356493 1278 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
CCSER1Q9C0I3 NKX2-2-AS1-201ENST00000549659 638 ntTSL 5 BASIC24.02■■□□□ 1.44
CCSER1Q9C0I3 AC104564.3-201ENST00000582367 638 ntBASIC24.02■■□□□ 1.44
CCSER1Q9C0I3 OXCT2-201ENST00000327582 1826 ntAPPRIS P1 BASIC24.02■■□□□ 1.44
CCSER1Q9C0I3 P4HTM-202ENST00000383729 2127 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
CCSER1Q9C0I3 VDAC1-203ENST00000395047 1873 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
CCSER1Q9C0I3 ILDR2-206ENST00000528703 2446 ntAPPRIS ALT2 TSL 5 BASIC24.02■■□□□ 1.44
CCSER1Q9C0I3 PABPC1L2A-201ENST00000373519 2237 ntAPPRIS P1 BASIC24.02■■□□□ 1.44
CCSER1Q9C0I3 PRSS33-202ENST00000570702 1676 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
CCSER1Q9C0I3 ABHD12B-201ENST00000337334 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC24.01■■□□□ 1.43
CCSER1Q9C0I3 SCRN2-212ENST00000584123 1745 ntTSL 1 (best) BASIC24.01■■□□□ 1.43
CCSER1Q9C0I3 CBWD6-201ENST00000377391 1792 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
CCSER1Q9C0I3 MEIS3-202ENST00000441740 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC24.01■■□□□ 1.43
CCSER1Q9C0I3 PRKCZ-AS1-201ENST00000333854 1253 ntTSL 2 BASIC24.01■■□□□ 1.43
CCSER1Q9C0I3 FAM219A-202ENST00000379078 770 ntTSL 3 BASIC24.01■■□□□ 1.43
CCSER1Q9C0I3 ORMDL1-202ENST00000392349 1137 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
CCSER1Q9C0I3 MFF-208ENST00000409616 1247 ntTSL 5 BASIC24.01■■□□□ 1.43
CCSER1Q9C0I3 AC010203.1-202ENST00000550096 695 ntTSL 3 BASIC24.01■■□□□ 1.43
CCSER1Q9C0I3 SERBP1-202ENST00000370990 1621 ntAPPRIS ALT2 TSL 1 (best) BASIC24.01■■□□□ 1.43
CCSER1Q9C0I3 SERPINB5-201ENST00000382771 2783 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
CCSER1Q9C0I3 CENPB-201ENST00000379751 2840 ntAPPRIS P1 BASIC24.01■■□□□ 1.43
CCSER1Q9C0I3 AC009237.3-201ENST00000393279 1427 ntBASIC24.01■■□□□ 1.43
CCSER1Q9C0I3 PELI3-201ENST00000320740 2740 ntTSL 1 (best) BASIC24■■□□□ 1.43
CCSER1Q9C0I3 YY1AP1-214ENST00000407221 2705 ntAPPRIS ALT2 TSL 2 BASIC24■■□□□ 1.43
CCSER1Q9C0I3 MBNL3-202ENST00000370844 1643 ntTSL 1 (best) BASIC24■■□□□ 1.43
CCSER1Q9C0I3 STEAP2-204ENST00000394626 2456 ntTSL 2 BASIC24■■□□□ 1.43
CCSER1Q9C0I3 SIRT3-215ENST00000532956 1235 ntTSL 2 BASIC24■■□□□ 1.43
CCSER1Q9C0I3 AC012313.1-203ENST00000597980 570 ntTSL 4 BASIC24■■□□□ 1.43
CCSER1Q9C0I3 SLCO3A1-202ENST00000424469 2705 ntTSL 1 (best) BASIC24■■□□□ 1.43
CCSER1Q9C0I3 GSX2-201ENST00000326902 1812 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
CCSER1Q9C0I3 MAPK8IP1P2-201ENST00000580257 1472 ntBASIC24■■□□□ 1.43
CCSER1Q9C0I3 FBXL14-201ENST00000339235 2111 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
CCSER1Q9C0I3 LMTK3-201ENST00000270238 4972 ntAPPRIS P2 TSL 1 (best) BASIC23.99■■□□□ 1.43
CCSER1Q9C0I3 GGA2-211ENST00000567468 1713 ntTSL 2 BASIC23.99■■□□□ 1.43
CCSER1Q9C0I3 AC007375.3-201ENST00000600936 2314 ntBASIC23.99■■□□□ 1.43
CCSER1Q9C0I3 PUF60-203ENST00000453551 1842 ntTSL 1 (best) BASIC23.99■■□□□ 1.43
CCSER1Q9C0I3 POLR2H-204ENST00000438240 994 ntTSL 3 BASIC23.99■■□□□ 1.43
CCSER1Q9C0I3 AC012414.1-201ENST00000556676 535 ntBASIC23.99■■□□□ 1.43
CCSER1Q9C0I3 GCH1-202ENST00000395514 1977 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
CCSER1Q9C0I3 PRR7-201ENST00000323249 1480 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
CCSER1Q9C0I3 BX005040.4-201ENST00000637145 1518 ntBASIC23.99■■□□□ 1.43
CCSER1Q9C0I3 PXK-203ENST00000383715 1756 ntTSL 5 BASIC23.98■■□□□ 1.43
CCSER1Q9C0I3 CDKN1C-204ENST00000440480 1811 ntAPPRIS ALT2 TSL 1 (best) BASIC23.98■■□□□ 1.43
CCSER1Q9C0I3 VRK2-201ENST00000340157 1888 ntAPPRIS P3 TSL 1 (best) BASIC23.98■■□□□ 1.43
CCSER1Q9C0I3 GRK3-203ENST00000619906 2873 ntTSL 5 BASIC23.98■■□□□ 1.43
CCSER1Q9C0I3 PSIP1-201ENST00000380715 1966 ntTSL 1 (best) BASIC23.98■■□□□ 1.43
CCSER1Q9C0I3 CCNL1-203ENST00000461804 1998 ntTSL 2 BASIC23.98■■□□□ 1.43
CCSER1Q9C0I3 GRK4-201ENST00000345167 2013 ntTSL 1 (best) BASIC23.98■■□□□ 1.43
CCSER1Q9C0I3 SLC35D3-201ENST00000331858 2359 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
CCSER1Q9C0I3 MRPL46-201ENST00000312475 1019 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
CCSER1Q9C0I3 PRDX4-202ENST00000379341 1005 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
CCSER1Q9C0I3 PPP1R14A-205ENST00000591585 949 ntTSL 2 BASIC23.98■■□□□ 1.43
CCSER1Q9C0I3 TRAF4-217ENST00000618771 543 ntTSL 5 BASIC23.98■■□□□ 1.43
CCSER1Q9C0I3 ARHGEF25-201ENST00000286494 2552 ntTSL 1 (best) BASIC23.98■■□□□ 1.43
CCSER1Q9C0I3 CENPS-CORT-201ENST00000400900 1469 ntTSL 2 BASIC23.98■■□□□ 1.43
CCSER1Q9C0I3 SNX7-201ENST00000306121 1734 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
CCSER1Q9C0I3 ILDR2-204ENST00000525740 2242 ntTSL 5 BASIC23.98■■□□□ 1.43
CCSER1Q9C0I3 NR5A1-204ENST00000620110 2975 ntTSL 5 BASIC23.97■■□□□ 1.43
CCSER1Q9C0I3 MTX2-201ENST00000249442 1364 ntAPPRIS P1 TSL 1 (best) BASIC23.97■■□□□ 1.43
CCSER1Q9C0I3 NXT1-201ENST00000254998 1123 ntAPPRIS P1 TSL 1 (best) BASIC23.97■■□□□ 1.43
CCSER1Q9C0I3 ARPC5L-201ENST00000259477 1325 ntAPPRIS P1 TSL 1 (best) BASIC23.97■■□□□ 1.43
CCSER1Q9C0I3 KRTAP17-1-201ENST00000334202 779 ntAPPRIS P1 BASIC23.97■■□□□ 1.43
CCSER1Q9C0I3 LTK-202ENST00000355166 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC23.97■■□□□ 1.43
CCSER1Q9C0I3 HYI-206ENST00000372434 1025 ntTSL 5 BASIC23.97■■□□□ 1.43
CCSER1Q9C0I3 NDUFB2-212ENST00000476279 1666 ntAPPRIS P1 TSL 5 BASIC23.97■■□□□ 1.43
CCSER1Q9C0I3 PAFAH1B2-205ENST00000529887 1056 ntTSL 1 (best) BASIC23.97■■□□□ 1.43
CCSER1Q9C0I3 HERC2P8-204ENST00000567073 1988 ntTSL 5 BASIC23.97■■□□□ 1.43
CCSER1Q9C0I3 TRAPPC6A-205ENST00000592647 514 ntTSL 2 BASIC23.97■■□□□ 1.43
CCSER1Q9C0I3 SGMS1-210ENST00000619438 1680 ntTSL 5 BASIC23.97■■□□□ 1.43
CCSER1Q9C0I3 AC026310.3-201ENST00000625186 2373 ntBASIC23.97■■□□□ 1.43
CCSER1Q9C0I3 AC055733.4-201ENST00000638462 1354 ntBASIC23.97■■□□□ 1.43
CCSER1Q9C0I3 FBXO27-202ENST00000509137 2130 ntAPPRIS P2 TSL 1 (best) BASIC23.96■■□□□ 1.43
CCSER1Q9C0I3 PRICKLE3-206ENST00000599218 2062 ntAPPRIS P3 TSL 1 (best) BASIC23.96■■□□□ 1.43
CCSER1Q9C0I3 RUNDC3B-207ENST00000493037 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC23.96■■□□□ 1.43
CCSER1Q9C0I3 TFG-201ENST00000240851 1978 ntAPPRIS P3 TSL 1 (best) BASIC23.96■■□□□ 1.43
CCSER1Q9C0I3 KLHL17-205ENST00000622660 1950 ntTSL 5 BASIC23.96■■□□□ 1.43
CCSER1Q9C0I3 MFF-203ENST00000349901 1716 ntTSL 2 BASIC23.96■■□□□ 1.43
CCSER1Q9C0I3 PAQR6-212ENST00000540423 1729 ntTSL 3 BASIC23.96■■□□□ 1.43
CCSER1Q9C0I3 HLA-DPB1-211ENST00000418931 1560 ntAPPRIS P2 BASIC23.96■■□□□ 1.43
CCSER1Q9C0I3 TBR1-202ENST00000410035 1454 ntTSL 2 BASIC23.96■■□□□ 1.43
Retrieved 100 of 98,524 protein–RNA pairs in 33.3 ms