Protein–RNA interactions for Protein: Q9BQE3

TUBA1C, Tubulin alpha-1C chain, humanhuman

Predictions only

Length 449 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TUBA1CQ9BQE3 KCNMA1-209ENST00000372443 5059 ntAPPRIS ALT2 TSL 5 BASIC20.1■□□□□ 0.81
TUBA1CQ9BQE3 CIZ1-206ENST00000372954 2731 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
TUBA1CQ9BQE3 STX10-202ENST00000343587 1128 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
TUBA1CQ9BQE3 pRNA.6-201ENST00000610482 90 ntBASIC20.1■□□□□ 0.81
TUBA1CQ9BQE3 pRNA.5-201ENST00000612139 90 ntBASIC20.1■□□□□ 0.81
TUBA1CQ9BQE3 pRNA.11-201ENST00000618423 90 ntBASIC20.1■□□□□ 0.81
TUBA1CQ9BQE3 pRNA.13-201ENST00000619112 90 ntBASIC20.1■□□□□ 0.81
TUBA1CQ9BQE3 CDKN1C-204ENST00000440480 1811 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
TUBA1CQ9BQE3 ECE2-203ENST00000359140 3147 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
TUBA1CQ9BQE3 RAB1B-201ENST00000311481 2007 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
TUBA1CQ9BQE3 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC20.1■□□□□ 0.81
TUBA1CQ9BQE3 ARHGAP11A-205ENST00000563864 2279 ntTSL 5 BASIC20.1■□□□□ 0.81
TUBA1CQ9BQE3 ZNF410-206ENST00000540593 1722 ntTSL 2 BASIC20.1■□□□□ 0.81
TUBA1CQ9BQE3 AC090360.1-201ENST00000569722 2218 ntAPPRIS ALT2 TSL 2 BASIC20.1■□□□□ 0.81
TUBA1CQ9BQE3 CIZ1-203ENST00000357558 2907 ntAPPRIS ALT2 TSL 5 BASIC20.09■□□□□ 0.81
TUBA1CQ9BQE3 TMEM98-206ENST00000579849 4434 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
TUBA1CQ9BQE3 SDSL-201ENST00000345635 1397 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
TUBA1CQ9BQE3 TCP1-202ENST00000392168 1878 ntTSL 5 BASIC20.09■□□□□ 0.81
TUBA1CQ9BQE3 ANKRD44-204ENST00000409919 1622 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
TUBA1CQ9BQE3 IRF3-228ENST00000601291 1556 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
TUBA1CQ9BQE3 CCDC107-205ENST00000421582 1324 ntAPPRIS ALT2 TSL 2 BASIC20.09■□□□□ 0.81
TUBA1CQ9BQE3 CCDC85B-201ENST00000312579 1524 ntAPPRIS P1 BASIC20.09■□□□□ 0.81
TUBA1CQ9BQE3 FNTA-208ENST00000529687 1950 ntTSL 2 BASIC20.09■□□□□ 0.81
TUBA1CQ9BQE3 ZC3H14-223ENST00000557607 1983 ntTSL 5 BASIC20.09■□□□□ 0.81
TUBA1CQ9BQE3 CDKN2D-201ENST00000335766 1086 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
TUBA1CQ9BQE3 ZDHHC16-205ENST00000370846 1280 ntTSL 3 BASIC20.09■□□□□ 0.81
TUBA1CQ9BQE3 PARD6B-202ENST00000396039 522 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
TUBA1CQ9BQE3 STOX1-202ENST00000399162 935 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
TUBA1CQ9BQE3 STOX1-203ENST00000399165 1135 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
TUBA1CQ9BQE3 MIR939-201ENST00000401314 82 ntBASIC20.09■□□□□ 0.81
TUBA1CQ9BQE3 AC093249.6-202ENST00000568500 1142 ntTSL 2 BASIC20.09■□□□□ 0.81
TUBA1CQ9BQE3 AC136469.2-201ENST00000623944 1028 ntBASIC20.09■□□□□ 0.81
TUBA1CQ9BQE3 IRX3-201ENST00000329734 2601 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
TUBA1CQ9BQE3 C19orf35-201ENST00000342063 2574 ntAPPRIS P1 TSL 2 BASIC20.09■□□□□ 0.81
TUBA1CQ9BQE3 AC092835.1-201ENST00000425953 1850 ntAPPRIS P1 TSL 5 BASIC20.09■□□□□ 0.81
TUBA1CQ9BQE3 ARL6IP4-201ENST00000315580 1644 ntAPPRIS P3 TSL 1 (best) BASIC20.09■□□□□ 0.81
TUBA1CQ9BQE3 IGDCC4-201ENST00000352385 6508 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
TUBA1CQ9BQE3 ADARB1-205ENST00000437626 5032 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
TUBA1CQ9BQE3 DNAJC7-203ENST00000457167 2022 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
TUBA1CQ9BQE3 GTSE1-AS1-202ENST00000623117 1518 ntBASIC20.08■□□□□ 0.81
TUBA1CQ9BQE3 TPTEP1-205ENST00000558085 1738 ntTSL 2 BASIC20.08■□□□□ 0.81
TUBA1CQ9BQE3 GFI1-202ENST00000370332 2855 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
TUBA1CQ9BQE3 PAQR9-201ENST00000340634 2452 ntAPPRIS P1 BASIC20.08■□□□□ 0.81
TUBA1CQ9BQE3 CLPSL2-201ENST00000360454 488 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.81
TUBA1CQ9BQE3 HYI-206ENST00000372434 1025 ntTSL 5 BASIC20.08■□□□□ 0.81
TUBA1CQ9BQE3 AC007009.1-201ENST00000458624 429 ntTSL 2 BASIC20.08■□□□□ 0.81
TUBA1CQ9BQE3 NRIP3-203ENST00000531090 980 ntTSL 2 BASIC20.08■□□□□ 0.81
TUBA1CQ9BQE3 FBXO33-202ENST00000554190 534 ntTSL 3 BASIC20.08■□□□□ 0.81
TUBA1CQ9BQE3 OIP5-AS1-208ENST00000560706 473 ntTSL 5 BASIC20.08■□□□□ 0.81
TUBA1CQ9BQE3 SAP25-203ENST00000614631 987 ntAPPRIS P2 TSL 2 BASIC20.08■□□□□ 0.81
TUBA1CQ9BQE3 CBWD3-212ENST00000616550 721 ntTSL 2 BASIC20.08■□□□□ 0.81
TUBA1CQ9BQE3 CBWD6-216ENST00000617933 721 ntTSL 3 BASIC20.08■□□□□ 0.81
TUBA1CQ9BQE3 MTMR9LP-204ENST00000441044 2624 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
TUBA1CQ9BQE3 PELI3-202ENST00000349459 2783 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
TUBA1CQ9BQE3 HSD17B1-202ENST00000585807 4982 ntAPPRIS P3 TSL 1 (best) BASIC20.08■□□□□ 0.8
TUBA1CQ9BQE3 WNT10B-202ENST00000403957 1817 ntTSL 5 BASIC20.07■□□□□ 0.8
TUBA1CQ9BQE3 SMOX-212ENST00000621355 2322 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
TUBA1CQ9BQE3 LAMTOR1-201ENST00000278671 1179 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
TUBA1CQ9BQE3 ZNRF2P3-201ENST00000424200 374 ntBASIC20.07■□□□□ 0.8
TUBA1CQ9BQE3 AP006621.3-202ENST00000530083 765 ntTSL 3 BASIC20.07■□□□□ 0.8
TUBA1CQ9BQE3 LRRK1-208ENST00000532029 1241 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
TUBA1CQ9BQE3 SCO2-204ENST00000543927 1051 ntAPPRIS P1 TSL 2 BASIC20.07■□□□□ 0.8
TUBA1CQ9BQE3 TRIP6-201ENST00000200457 1942 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
TUBA1CQ9BQE3 TNFAIP8L3-202ENST00000637513 2002 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
TUBA1CQ9BQE3 LENG1-201ENST00000222224 1542 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
TUBA1CQ9BQE3 SAMD8-202ENST00000372690 1654 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
TUBA1CQ9BQE3 SNRK-203ENST00000437827 1995 ntTSL 2 BASIC20.06■□□□□ 0.8
TUBA1CQ9BQE3 FAM47E-201ENST00000424749 1484 ntAPPRIS P3 TSL 5 BASIC20.06■□□□□ 0.8
TUBA1CQ9BQE3 SIRT3-204ENST00000525319 1475 ntAPPRIS ALT2 TSL 2 BASIC20.06■□□□□ 0.8
TUBA1CQ9BQE3 GRM6-201ENST00000231188 6143 ntAPPRIS P1 TSL 2 BASIC20.06■□□□□ 0.8
TUBA1CQ9BQE3 LKAAEAR1-201ENST00000302096 761 ntAPPRIS ALT2 TSL 2 BASIC20.06■□□□□ 0.8
TUBA1CQ9BQE3 LKAAEAR1-202ENST00000308906 868 ntAPPRIS P2 TSL 1 (best) BASIC20.06■□□□□ 0.8
TUBA1CQ9BQE3 GUK1-205ENST00000366722 850 ntTSL 3 BASIC20.06■□□□□ 0.8
TUBA1CQ9BQE3 HYI-204ENST00000372432 1066 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
TUBA1CQ9BQE3 ARIH2OS-201ENST00000408959 1598 ntAPPRIS P1 BASIC20.06■□□□□ 0.8
TUBA1CQ9BQE3 SESN3-202ENST00000416495 1408 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
TUBA1CQ9BQE3 COL8A2-203ENST00000481785 2036 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
TUBA1CQ9BQE3 DISC1-213ENST00000537876 2349 ntAPPRIS ALT2 TSL 2 BASIC20.06■□□□□ 0.8
TUBA1CQ9BQE3 SYNGR3-202ENST00000562045 1743 ntTSL 2 BASIC20.06■□□□□ 0.8
TUBA1CQ9BQE3 AC087742.1-201ENST00000575880 1738 ntBASIC20.06■□□□□ 0.8
TUBA1CQ9BQE3 MAG-206ENST00000597035 542 ntTSL 4 BASIC20.06■□□□□ 0.8
TUBA1CQ9BQE3 AC244015.2-201ENST00000616358 1861 ntBASIC20.06■□□□□ 0.8
TUBA1CQ9BQE3 ZNF446-208ENST00000622313 1884 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
TUBA1CQ9BQE3 MANEAL-202ENST00000373045 2685 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
TUBA1CQ9BQE3 HHIPL1-202ENST00000357223 2241 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
TUBA1CQ9BQE3 RASGRP1-201ENST00000310803 5023 ntAPPRIS P2 TSL 1 (best) BASIC20.05■□□□□ 0.8
TUBA1CQ9BQE3 RASGRP1-204ENST00000539159 5021 ntAPPRIS ALT1 TSL 5 BASIC20.05■□□□□ 0.8
TUBA1CQ9BQE3 C7orf25-203ENST00000431882 1645 ntTSL 2 BASIC20.05■□□□□ 0.8
TUBA1CQ9BQE3 IDH2-202ENST00000540499 1453 ntTSL 2 BASIC20.05■□□□□ 0.8
TUBA1CQ9BQE3 SLC19A1-212ENST00000567670 2029 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
TUBA1CQ9BQE3 DISC1-220ENST00000602873 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
TUBA1CQ9BQE3 SPPL2B-211ENST00000614794 1559 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
TUBA1CQ9BQE3 ZMAT3-203ENST00000432729 2944 ntAPPRIS ALT1 TSL 2 BASIC20.05■□□□□ 0.8
TUBA1CQ9BQE3 AC068580.1-201ENST00000446489 252 ntTSL 3 BASIC20.05■□□□□ 0.8
TUBA1CQ9BQE3 AC091305.1-201ENST00000479476 895 ntBASIC20.05■□□□□ 0.8
TUBA1CQ9BQE3 C15orf61-202ENST00000557807 769 ntTSL 2 BASIC20.05■□□□□ 0.8
TUBA1CQ9BQE3 AC007448.3-201ENST00000585193 689 ntTSL 2 BASIC20.05■□□□□ 0.8
TUBA1CQ9BQE3 AC008764.7-201ENST00000593779 1081 ntBASIC20.05■□□□□ 0.8
TUBA1CQ9BQE3 GNB3-201ENST00000229264 1923 ntAPPRIS P3 TSL 5 BASIC20.05■□□□□ 0.8
TUBA1CQ9BQE3 SIMC1-204ENST00000430704 1925 ntAPPRIS P3 TSL 2 BASIC20.05■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 28.9 ms