Protein–RNA interactions for Protein: Q99959

PKP2, Plakophilin-2, humanhuman

Predictions only

Length 881 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PKP2Q99959 HNRNPUL2-201ENST00000301785 5106 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
PKP2Q99959 CHRAC1-203ENST00000519533 1678 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
PKP2Q99959 DYM-203ENST00000442713 2147 ntTSL 2 BASIC20.12■□□□□ 0.81
PKP2Q99959 YIPF2-201ENST00000253031 2087 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
PKP2Q99959 B4GALT5-201ENST00000371711 4722 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
PKP2Q99959 KLF16-201ENST00000250916 2890 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
PKP2Q99959 EIF5A-211ENST00000576930 1439 ntAPPRIS P1 TSL 5 BASIC20.11■□□□□ 0.81
PKP2Q99959 TDRP-203ENST00000523656 2622 ntTSL 5 BASIC20.11■□□□□ 0.81
PKP2Q99959 SMPDL3A-203ENST00000539041 1755 ntTSL 2 BASIC20.11■□□□□ 0.81
PKP2Q99959 KLC1-208ENST00000452929 2453 ntTSL 5 BASIC20.11■□□□□ 0.81
PKP2Q99959 ABHD17B-202ENST00000377041 1312 ntAPPRIS P4 TSL 1 (best) BASIC20.11■□□□□ 0.81
PKP2Q99959 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC20.11■□□□□ 0.81
PKP2Q99959 AL354928.1-201ENST00000438380 617 ntTSL 2 BASIC20.11■□□□□ 0.81
PKP2Q99959 SMKR1-201ENST00000462322 1035 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
PKP2Q99959 NTF6A-201ENST00000591175 560 ntBASIC20.11■□□□□ 0.81
PKP2Q99959 RNASEH2B-201ENST00000336617 1629 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
PKP2Q99959 RTP5-201ENST00000343216 2296 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
PKP2Q99959 CYP21A2-222ENST00000435122 1914 ntTSL 2 BASIC20.11■□□□□ 0.81
PKP2Q99959 VRK2-201ENST00000340157 1888 ntAPPRIS P3 TSL 1 (best) BASIC20.11■□□□□ 0.81
PKP2Q99959 TXNRD2-203ENST00000400519 3155 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
PKP2Q99959 AC074143.1-203ENST00000518227 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
PKP2Q99959 ZC3HAV1L-201ENST00000275766 1753 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
PKP2Q99959 BACE2-201ENST00000328735 2824 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
PKP2Q99959 LGALS9B-201ENST00000324290 1243 ntAPPRIS P2 TSL 5 BASIC20.1■□□□□ 0.81
PKP2Q99959 RSPO4-202ENST00000400634 722 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
PKP2Q99959 IL17RC-205ENST00000413608 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
PKP2Q99959 FASTK-212ENST00000482571 1764 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
PKP2Q99959 KIRREL2-202ENST00000347900 2015 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
PKP2Q99959 PCED1A-202ENST00000360652 2016 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
PKP2Q99959 CDK13-207ENST00000613626 3099 ntTSL 5 BASIC20.1■□□□□ 0.81
PKP2Q99959 CCKBR-206ENST00000532715 1734 ntTSL 3 BASIC20.1■□□□□ 0.81
PKP2Q99959 IRF7-204ENST00000397570 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
PKP2Q99959 HSD3B7-202ENST00000297679 2172 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
PKP2Q99959 FBXO31-207ENST00000618298 1871 ntTSL 5 BASIC20.09■□□□□ 0.81
PKP2Q99959 TSNAXIP1-202ENST00000415766 2338 ntAPPRIS ALT2 TSL 2 BASIC20.09■□□□□ 0.81
PKP2Q99959 TTC7A-201ENST00000319190 5157 ntAPPRIS P1 TSL 2 BASIC20.09■□□□□ 0.81
PKP2Q99959 OXCT2P1-201ENST00000447263 1535 ntBASIC20.09■□□□□ 0.81
PKP2Q99959 CDKN3-202ENST00000335183 893 ntAPPRIS P2 TSL 1 (best) BASIC20.09■□□□□ 0.81
PKP2Q99959 C20orf24-203ENST00000373852 1059 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
PKP2Q99959 MDK-206ENST00000407067 1026 ntAPPRIS P2 TSL 1 (best) BASIC20.09■□□□□ 0.81
PKP2Q99959 CDKN3-211ENST00000611205 874 ntAPPRIS ALT2 TSL 5 BASIC20.09■□□□□ 0.81
PKP2Q99959 HAND2-AS1-237ENST00000616485 2420 ntTSL 2 BASIC20.09■□□□□ 0.81
PKP2Q99959 C16orf70-201ENST00000219139 2865 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
PKP2Q99959 TPD52-209ENST00000518937 2856 ntTSL 2 BASIC20.09■□□□□ 0.81
PKP2Q99959 GPSM1-201ENST00000291775 2114 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
PKP2Q99959 HCN2-201ENST00000251287 3408 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
PKP2Q99959 RHNO1-204ENST00000489288 1870 ntAPPRIS P3 TSL 1 (best) BASIC20.09■□□□□ 0.81
PKP2Q99959 SMOC2-206ENST00000535039 1875 ntTSL 5 BASIC20.09■□□□□ 0.81
PKP2Q99959 TMEM179-204ENST00000556573 1430 ntAPPRIS P1 TSL 3 BASIC20.09■□□□□ 0.81
PKP2Q99959 TMEM51-203ENST00000400796 1842 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
PKP2Q99959 AFG3L1P-217ENST00000557444 2447 ntBASIC20.08■□□□□ 0.81
PKP2Q99959 PFKFB3-216ENST00000625260 1752 ntAPPRIS ALT1 TSL 5 BASIC20.08■□□□□ 0.81
PKP2Q99959 CITED4-201ENST00000372638 1316 ntAPPRIS P1 BASIC20.08■□□□□ 0.81
PKP2Q99959 IKBKG-212ENST00000617207 1949 ntAPPRIS ALT1 TSL 3 BASIC20.08■□□□□ 0.81
PKP2Q99959 EBF1-202ENST00000380654 2345 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
PKP2Q99959 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC20.08■□□□□ 0.81
PKP2Q99959 PRELID1-201ENST00000303204 1261 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
PKP2Q99959 TMEM147-203ENST00000392205 767 ntTSL 2 BASIC20.08■□□□□ 0.81
PKP2Q99959 AC104564.3-201ENST00000582367 638 ntBASIC20.08■□□□□ 0.81
PKP2Q99959 AL158151.1-201ENST00000372490 2047 ntTSL 2 BASIC20.08■□□□□ 0.8
PKP2Q99959 C10orf91-202ENST00000392630 1846 ntTSL 2 BASIC20.08■□□□□ 0.8
PKP2Q99959 SLC35A2-210ENST00000616181 1614 ntTSL 2 BASIC20.08■□□□□ 0.8
PKP2Q99959 CCDC47-202ENST00000403162 2195 ntAPPRIS P1 TSL 2 BASIC20.08■□□□□ 0.8
PKP2Q99959 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC20.08■□□□□ 0.8
PKP2Q99959 CYP21A1P-201ENST00000342991 1971 ntTSL 3 BASIC20.08■□□□□ 0.8
PKP2Q99959 PITX2-201ENST00000306732 2320 ntAPPRIS P4 TSL 1 (best) BASIC20.08■□□□□ 0.8
PKP2Q99959 TRIM58-201ENST00000366481 3225 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
PKP2Q99959 EPCAM-202ENST00000405271 1530 ntTSL 5 BASIC20.07■□□□□ 0.8
PKP2Q99959 FDFT1-210ENST00000525954 1890 ntTSL 2 BASIC20.07■□□□□ 0.8
PKP2Q99959 NAE1-204ENST00000394074 1654 ntTSL 5 BASIC20.07■□□□□ 0.8
PKP2Q99959 KCNN1-204ENST00000615435 1691 ntAPPRIS ALT1 TSL 5 BASIC20.07■□□□□ 0.8
PKP2Q99959 OXLD1-201ENST00000374741 620 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
PKP2Q99959 HYI-210ENST00000486909 905 ntTSL 5 BASIC20.07■□□□□ 0.8
PKP2Q99959 CITED2-203ENST00000537332 1780 ntTSL 3 BASIC20.07■□□□□ 0.8
PKP2Q99959 RARG-204ENST00000543726 1779 ntTSL 2 BASIC20.07■□□□□ 0.8
PKP2Q99959 PIF1-202ENST00000333425 2278 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
PKP2Q99959 NYX-202ENST00000378220 2297 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
PKP2Q99959 GPR35-201ENST00000319838 2249 ntAPPRIS P3 TSL 2 BASIC20.07■□□□□ 0.8
PKP2Q99959 SCRN2-212ENST00000584123 1745 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
PKP2Q99959 AL445183.2-201ENST00000439621 1871 ntTSL 2 BASIC20.07■□□□□ 0.8
PKP2Q99959 GABARAPL3-202ENST00000624044 1851 ntBASIC20.07■□□□□ 0.8
PKP2Q99959 DUSP26-201ENST00000256261 1835 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
PKP2Q99959 SOCS2-201ENST00000340600 2761 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
PKP2Q99959 AC016065.1-201ENST00000500118 2413 ntTSL 2 BASIC20.06■□□□□ 0.8
PKP2Q99959 ABHD16B-201ENST00000369916 1491 ntAPPRIS P1 BASIC20.06■□□□□ 0.8
PKP2Q99959 MRPS2-202ENST00000371785 1640 ntAPPRIS P1 TSL 3 BASIC20.06■□□□□ 0.8
PKP2Q99959 SH3RF3-AS1-201ENST00000567491 1604 ntBASIC20.06■□□□□ 0.8
PKP2Q99959 NAA35-202ENST00000376040 1797 ntTSL 2 BASIC20.06■□□□□ 0.8
PKP2Q99959 AL049796.1-201ENST00000565336 1766 ntBASIC20.06■□□□□ 0.8
PKP2Q99959 MAF-202ENST00000393350 6384 ntAPPRIS ALT2 BASIC20.06■□□□□ 0.8
PKP2Q99959 NFIB-207ENST00000397579 3129 ntTSL 5 BASIC20.06■□□□□ 0.8
PKP2Q99959 GBX1-201ENST00000297537 1092 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
PKP2Q99959 MFSD7-202ENST00000347950 1599 ntTSL 2 BASIC20.06■□□□□ 0.8
PKP2Q99959 FAM3A-202ENST00000359889 1712 ntAPPRIS P1 TSL 2 BASIC20.06■□□□□ 0.8
PKP2Q99959 NDEL1-219ENST00000585098 454 ntTSL 3 BASIC20.06■□□□□ 0.8
PKP2Q99959 PCDHAC2-203ENST00000615316 3011 ntBASIC20.06■□□□□ 0.8
PKP2Q99959 PARD3-207ENST00000374788 5996 ntAPPRIS ALT1 TSL 1 (best) BASIC20.06■□□□□ 0.8
PKP2Q99959 WDR86-203ENST00000469830 1691 ntTSL 2 BASIC20.06■□□□□ 0.8
PKP2Q99959 C17orf82-201ENST00000623772 1530 ntBASIC20.06■□□□□ 0.8
PKP2Q99959 CSPG5-203ENST00000456150 2089 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 25.6 ms