Protein–RNA interactions for Protein: Q99743

NPAS2, Neuronal PAS domain-containing protein 2, humanhuman

Predictions only

Length 824 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS2Q99743 CBWD5-207ENST00000382405 1791 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
NPAS2Q99743 A1BG-201ENST00000263100 1722 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
NPAS2Q99743 ATG4D-201ENST00000309469 1949 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
NPAS2Q99743 AF106564.1-201ENST00000607058 2553 ntBASIC20.86■□□□□ 0.93
NPAS2Q99743 CCDC88B-203ENST00000359902 2326 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
NPAS2Q99743 HNRNPAB-201ENST00000355836 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
NPAS2Q99743 ENTPD6-203ENST00000376652 2750 ntAPPRIS P3 TSL 1 (best) BASIC20.85■□□□□ 0.93
NPAS2Q99743 EXOC3L2-202ENST00000413988 2964 ntAPPRIS P1 TSL 5 BASIC20.85■□□□□ 0.93
NPAS2Q99743 RAP1B-204ENST00000393436 2049 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
NPAS2Q99743 SYF2-201ENST00000236273 1345 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
NPAS2Q99743 NEURL3-201ENST00000310865 1710 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
NPAS2Q99743 SPAST-204ENST00000621856 1715 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
NPAS2Q99743 FAM174B-207ENST00000555748 866 ntAPPRIS ALT2 TSL 3 BASIC20.85■□□□□ 0.93
NPAS2Q99743 AC142381.2-201ENST00000566120 298 ntBASIC20.85■□□□□ 0.93
NPAS2Q99743 MIR4767-201ENST00000582827 78 ntBASIC20.85■□□□□ 0.93
NPAS2Q99743 ZNF497-202ENST00000425453 2261 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
NPAS2Q99743 VGF-203ENST00000611537 1622 ntTSL 5 BASIC20.85■□□□□ 0.93
NPAS2Q99743 PARD3-210ENST00000374794 5669 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
NPAS2Q99743 IRX4-207ENST00000613726 2403 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
NPAS2Q99743 CBWD1-203ENST00000377400 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
NPAS2Q99743 IL15RA-206ENST00000397248 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
NPAS2Q99743 FMR1-204ENST00000370471 4125 ntTSL 5 BASIC20.85■□□□□ 0.93
NPAS2Q99743 RNF180-201ENST00000296615 1727 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
NPAS2Q99743 DOK3-201ENST00000312943 2292 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
NPAS2Q99743 DUSP9-202ENST00000370167 2289 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
NPAS2Q99743 DOC2A-218ENST00000616445 2065 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
NPAS2Q99743 TLX3-201ENST00000296921 1493 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
NPAS2Q99743 GOLGA2P6-201ENST00000340929 2049 ntBASIC20.84■□□□□ 0.93
NPAS2Q99743 EBPL-204ENST00000378272 766 ntTSL 3 BASIC20.84■□□□□ 0.93
NPAS2Q99743 ZNF264-206ENST00000600531 774 ntTSL 2 BASIC20.84■□□□□ 0.93
NPAS2Q99743 AL355001.2-201ENST00000620617 1191 ntBASIC20.84■□□□□ 0.93
NPAS2Q99743 BAG1-212ENST00000641048 1038 ntAPPRIS P3 BASIC20.84■□□□□ 0.93
NPAS2Q99743 FHL3-201ENST00000373016 1647 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
NPAS2Q99743 TMEM129-201ENST00000303277 2678 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
NPAS2Q99743 SYT8-201ENST00000341958 1556 ntAPPRIS ALT2 TSL 5 BASIC20.84■□□□□ 0.93
NPAS2Q99743 PKIB-204ENST00000368448 1561 ntAPPRIS P1 TSL 5 BASIC20.84■□□□□ 0.93
NPAS2Q99743 SERTAD3-201ENST00000322354 1734 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
NPAS2Q99743 AC096677.1-201ENST00000454651 1516 ntTSL 2 BASIC20.83■□□□□ 0.93
NPAS2Q99743 MAP7-206ENST00000611373 2317 ntAPPRIS ALT2 TSL 5 BASIC20.83■□□□□ 0.93
NPAS2Q99743 POTEC-204ENST00000620346 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.93
NPAS2Q99743 SCRT1-201ENST00000569446 3779 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
NPAS2Q99743 ARL6IP4-201ENST00000315580 1644 ntAPPRIS P3 TSL 1 (best) BASIC20.83■□□□□ 0.93
NPAS2Q99743 Z98882.1-201ENST00000622160 2253 ntBASIC20.83■□□□□ 0.93
NPAS2Q99743 PTMA-205ENST00000410064 814 ntTSL 2 BASIC20.83■□□□□ 0.93
NPAS2Q99743 AP006621.3-202ENST00000530083 765 ntTSL 3 BASIC20.83■□□□□ 0.93
NPAS2Q99743 FBXO33-202ENST00000554190 534 ntTSL 3 BASIC20.83■□□□□ 0.93
NPAS2Q99743 GRAMD4P4-201ENST00000613563 1115 ntBASIC20.83■□□□□ 0.93
NPAS2Q99743 AC241377.3-202ENST00000626088 1088 ntBASIC20.83■□□□□ 0.93
NPAS2Q99743 AC241585.3-202ENST00000628937 1088 ntBASIC20.83■□□□□ 0.93
NPAS2Q99743 AC245100.8-202ENST00000629247 1058 ntBASIC20.83■□□□□ 0.93
NPAS2Q99743 ENKD1-206ENST00000602644 1353 ntTSL 5 BASIC20.83■□□□□ 0.92
NPAS2Q99743 TBX1-203ENST00000359500 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.92
NPAS2Q99743 C1QTNF4-201ENST00000302514 1664 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
NPAS2Q99743 SPHK1-202ENST00000392496 1779 ntAPPRIS P3 TSL 1 (best) BASIC20.82■□□□□ 0.92
NPAS2Q99743 MYCBPAP-202ENST00000419930 1640 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
NPAS2Q99743 AC004687.1-201ENST00000579003 1625 ntBASIC20.82■□□□□ 0.92
NPAS2Q99743 COMT-206ENST00000407537 1457 ntAPPRIS P3 TSL 5 BASIC20.82■□□□□ 0.92
NPAS2Q99743 AL136967.2-201ENST00000623968 743 ntBASIC20.82■□□□□ 0.92
NPAS2Q99743 PDK3-201ENST00000379162 1809 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
NPAS2Q99743 CNTD2-202ENST00000430325 1817 ntAPPRIS P2 TSL 2 BASIC20.82■□□□□ 0.92
NPAS2Q99743 CERS4-205ENST00000558331 1803 ntTSL 5 BASIC20.82■□□□□ 0.92
NPAS2Q99743 ZNF37BP-201ENST00000435805 1695 ntTSL 5 BASIC20.82■□□□□ 0.92
NPAS2Q99743 HHIPL1-202ENST00000357223 2241 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
NPAS2Q99743 UBA5-208ENST00000473651 1513 ntTSL 5 BASIC20.82■□□□□ 0.92
NPAS2Q99743 OSR1-201ENST00000272223 1936 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
NPAS2Q99743 FUS-210ENST00000568685 1785 ntAPPRIS ALT2 TSL 5 BASIC20.82■□□□□ 0.92
NPAS2Q99743 ACADVL-202ENST00000350303 2191 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
NPAS2Q99743 HTRA3-202ENST00000382512 2023 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
NPAS2Q99743 KCTD13-207ENST00000568000 2528 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
NPAS2Q99743 RGS20-202ENST00000297313 2104 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
NPAS2Q99743 CCDC107-205ENST00000421582 1324 ntAPPRIS ALT2 TSL 2 BASIC20.81■□□□□ 0.92
NPAS2Q99743 CENPB-201ENST00000379751 2840 ntAPPRIS P1 BASIC20.81■□□□□ 0.92
NPAS2Q99743 CDKN2D-201ENST00000335766 1086 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
NPAS2Q99743 ZNRF2P3-201ENST00000424200 374 ntBASIC20.81■□□□□ 0.92
NPAS2Q99743 AP001330.3-201ENST00000520123 633 ntBASIC20.81■□□□□ 0.92
NPAS2Q99743 AF213884.3-201ENST00000563833 479 ntBASIC20.81■□□□□ 0.92
NPAS2Q99743 DUX4L4-201ENST00000566884 1269 ntBASIC20.81■□□□□ 0.92
NPAS2Q99743 PARD3-214ENST00000545693 5962 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
NPAS2Q99743 SETD6-202ENST00000310682 2042 ntAPPRIS P3 TSL 2 BASIC20.81■□□□□ 0.92
NPAS2Q99743 RUNX3-202ENST00000338888 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
NPAS2Q99743 METTL21A-210ENST00000458426 1366 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
NPAS2Q99743 SNX21-212ENST00000491381 1607 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
NPAS2Q99743 HEY2-201ENST00000368364 2678 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
NPAS2Q99743 MANEAL-202ENST00000373045 2685 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
NPAS2Q99743 GUCY1A3-210ENST00000513574 2656 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
NPAS2Q99743 SDK1-201ENST00000389531 7606 ntAPPRIS ALT2 TSL 5 BASIC20.8■□□□□ 0.92
NPAS2Q99743 NTNG2-202ENST00000393229 4792 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
NPAS2Q99743 MIR939-201ENST00000401314 82 ntBASIC20.8■□□□□ 0.92
NPAS2Q99743 ARFIP2-205ENST00000525235 852 ntTSL 2 BASIC20.8■□□□□ 0.92
NPAS2Q99743 NRIP3-203ENST00000531090 980 ntTSL 2 BASIC20.8■□□□□ 0.92
NPAS2Q99743 MIR3181-201ENST00000578512 73 ntBASIC20.8■□□□□ 0.92
NPAS2Q99743 AC010336.5-201ENST00000594308 317 ntTSL 3 BASIC20.8■□□□□ 0.92
NPAS2Q99743 AL138724.1-201ENST00000606771 1088 ntBASIC20.8■□□□□ 0.92
NPAS2Q99743 CA15P2-201ENST00000611168 834 ntBASIC20.8■□□□□ 0.92
NPAS2Q99743 AC011298.3-201ENST00000615796 283 ntBASIC20.8■□□□□ 0.92
NPAS2Q99743 GRM6-201ENST00000231188 6143 ntAPPRIS P1 TSL 2 BASIC20.8■□□□□ 0.92
NPAS2Q99743 FBXL14-201ENST00000339235 2111 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
NPAS2Q99743 AC090377.1-201ENST00000585691 1762 ntTSL 3 BASIC20.8■□□□□ 0.92
NPAS2Q99743 CFP-202ENST00000377005 1435 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
NPAS2Q99743 CEBPA-201ENST00000498907 2631 ntAPPRIS P1 BASIC20.79■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 25.5 ms