Protein–RNA interactions for Protein: Q96T58

SPEN, Msx2-interacting protein, humanhuman

Known RBP Predictions only

Length 3,664 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPENQ96T58 GTF2A2-203ENST00000396061 758 ntAPPRIS P1 TSL 2 BASIC19.48■□□□□ 0.71
SPENQ96T58 MIPEPP3-201ENST00000412105 444 ntBASIC19.48■□□□□ 0.71
SPENQ96T58 GPX1-204ENST00000620890 897 ntAPPRIS ALT2 TSL 5 BASIC19.48■□□□□ 0.71
SPENQ96T58 AL160396.2-202ENST00000636692 566 ntAPPRIS ALT2 TSL 5 BASIC19.48■□□□□ 0.71
SPENQ96T58 MRPL37-206ENST00000605337 1582 ntTSL 5 BASIC19.47■□□□□ 0.71
SPENQ96T58 PRDX1-201ENST00000262746 1234 ntAPPRIS P1 TSL 5 BASIC19.47■□□□□ 0.71
SPENQ96T58 MFSD7-201ENST00000322224 2123 ntAPPRIS P3 TSL 1 (best) BASIC19.47■□□□□ 0.71
SPENQ96T58 LGALS7-201ENST00000378626 466 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
SPENQ96T58 AC010536.3-201ENST00000620306 533 ntBASIC19.47■□□□□ 0.71
SPENQ96T58 AP000802.1-201ENST00000500537 1934 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
SPENQ96T58 NR2F6-201ENST00000291442 2404 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
SPENQ96T58 AP006587.3-201ENST00000525742 1516 ntBASIC19.47■□□□□ 0.71
SPENQ96T58 C9orf163-202ENST00000624034 2573 ntBASIC19.47■□□□□ 0.71
SPENQ96T58 FNDC11-201ENST00000370097 1119 ntAPPRIS P1 TSL 2 BASIC19.47■□□□□ 0.71
SPENQ96T58 HOXD12-201ENST00000404162 841 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
SPENQ96T58 PRR7-202ENST00000502922 1345 ntAPPRIS P1 TSL 2 BASIC19.47■□□□□ 0.71
SPENQ96T58 FRS3-202ENST00000373018 2174 ntAPPRIS P1 TSL 3 BASIC19.47■□□□□ 0.71
SPENQ96T58 NDEL1-201ENST00000334527 2372 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
SPENQ96T58 SDHC-201ENST00000342751 1127 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
SPENQ96T58 NMRAL1-212ENST00000574425 1240 ntAPPRIS P1 TSL 2 BASIC19.47■□□□□ 0.71
SPENQ96T58 ITM2C-203ENST00000335005 1889 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
SPENQ96T58 ROR1-202ENST00000371080 2305 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
SPENQ96T58 SERP1-208ENST00000491660 830 ntTSL 2 BASIC19.46■□□□□ 0.71
SPENQ96T58 MVB12A-212ENST00000543795 1154 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
SPENQ96T58 RBM42-203ENST00000588161 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC19.46■□□□□ 0.71
SPENQ96T58 MBD3L1-202ENST00000595891 872 ntAPPRIS P1 TSL 2 BASIC19.46■□□□□ 0.71
SPENQ96T58 SLC22A31-206ENST00000614943 1860 ntTSL 5 BASIC19.46■□□□□ 0.71
SPENQ96T58 TMSB15B-202ENST00000436583 2186 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
SPENQ96T58 CBLN2-209ENST00000585159 2406 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
SPENQ96T58 CCDC74A-201ENST00000295171 1543 ntAPPRIS P3 TSL 1 (best) BASIC19.46■□□□□ 0.71
SPENQ96T58 CCDC74B-201ENST00000310463 1549 ntAPPRIS P3 TSL 2 BASIC19.46■□□□□ 0.71
SPENQ96T58 CASP9-203ENST00000375890 1351 ntTSL 2 BASIC19.46■□□□□ 0.71
SPENQ96T58 DCTN3-202ENST00000341694 899 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
SPENQ96T58 DCTN3-205ENST00000378916 773 ntTSL 2 BASIC19.46■□□□□ 0.71
SPENQ96T58 GDI1-204ENST00000447750 2474 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
SPENQ96T58 LDB1-201ENST00000361198 2285 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
SPENQ96T58 NOXO1-203ENST00000397280 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
SPENQ96T58 AQP12B-201ENST00000407834 1094 ntAPPRIS P2 TSL 1 (best) BASIC19.45■□□□□ 0.7
SPENQ96T58 EP300-AS1-201ENST00000420537 457 ntTSL 3 BASIC19.45■□□□□ 0.7
SPENQ96T58 DDN-AS1-202ENST00000547866 2114 ntTSL 3 BASIC19.45■□□□□ 0.7
SPENQ96T58 CD24-208ENST00000622315 825 ntAPPRIS ALT2 TSL 2 BASIC19.45■□□□□ 0.7
SPENQ96T58 NEU4-204ENST00000405370 1907 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
SPENQ96T58 NAA10-208ENST00000464845 1772 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
SPENQ96T58 EMC6-202ENST00000397133 762 ntAPPRIS P1 TSL 2 BASIC19.45■□□□□ 0.7
SPENQ96T58 CPLX1-203ENST00000505203 2011 ntTSL 2 BASIC19.45■□□□□ 0.7
SPENQ96T58 CBY3-201ENST00000376974 785 ntAPPRIS P1 TSL 2 BASIC19.45■□□□□ 0.7
SPENQ96T58 PUSL1-201ENST00000379031 1287 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
SPENQ96T58 AC106738.1-201ENST00000560487 359 ntTSL 3 BASIC19.45■□□□□ 0.7
SPENQ96T58 EFNA2-201ENST00000215368 949 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
SPENQ96T58 EIF3J-AS1-205ENST00000560750 1093 ntTSL 3 BASIC19.44■□□□□ 0.7
SPENQ96T58 AP001160.3-201ENST00000601484 763 ntBASIC19.44■□□□□ 0.7
SPENQ96T58 MCUB-201ENST00000394650 2278 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
SPENQ96T58 PARP9-207ENST00000492382 1837 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
SPENQ96T58 RTBDN-203ENST00000458671 1066 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
SPENQ96T58 FOXA3-201ENST00000302177 1989 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
SPENQ96T58 PRSS56-201ENST00000449534 2157 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
SPENQ96T58 PRSS56-203ENST00000617714 2158 ntAPPRIS P2 TSL 5 BASIC19.44■□□□□ 0.7
SPENQ96T58 AC090377.1-201ENST00000585691 1762 ntTSL 3 BASIC19.44■□□□□ 0.7
SPENQ96T58 FKBP8-209ENST00000597960 1781 ntAPPRIS P3 TSL 5 BASIC19.44■□□□□ 0.7
SPENQ96T58 CEACAM4-201ENST00000221954 1205 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
SPENQ96T58 LIPT2-201ENST00000310109 1018 ntAPPRIS P1 TSL 2 BASIC19.44■□□□□ 0.7
SPENQ96T58 SERF1A-201ENST00000317633 963 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
SPENQ96T58 NDUFB2-203ENST00000461457 559 ntTSL 3 BASIC19.44■□□□□ 0.7
SPENQ96T58 UNC93B4-201ENST00000505679 747 ntBASIC19.44■□□□□ 0.7
SPENQ96T58 C19orf25-213ENST00000592872 1287 ntAPPRIS P1 TSL 2 BASIC19.44■□□□□ 0.7
SPENQ96T58 CEACAM4-203ENST00000600925 899 ntAPPRIS ALT2 TSL 2 BASIC19.44■□□□□ 0.7
SPENQ96T58 FPGS-204ENST00000393706 2230 ntTSL 2 BASIC19.44■□□□□ 0.7
SPENQ96T58 CAPN10-203ENST00000352879 862 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
SPENQ96T58 DNPH1-202ENST00000393987 796 ntTSL 2 BASIC19.43■□□□□ 0.7
SPENQ96T58 AC013268.1-206ENST00000638368 961 ntBASIC19.43■□□□□ 0.7
SPENQ96T58 AC112229.1-201ENST00000639295 961 ntBASIC19.43■□□□□ 0.7
SPENQ96T58 SLC25A24P1-201ENST00000411846 1569 ntTSL 5 BASIC19.43■□□□□ 0.7
SPENQ96T58 SELENOO-201ENST00000380903 2315 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
SPENQ96T58 SELENOO-203ENST00000611222 2311 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
SPENQ96T58 CBWD3-202ENST00000377342 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
SPENQ96T58 C17orf107-202ENST00000521575 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
SPENQ96T58 INO80E-214ENST00000620599 515 ntTSL 2 BASIC19.43■□□□□ 0.7
SPENQ96T58 AC114730.1-201ENST00000400768 472 ntTSL 4 BASIC19.43■□□□□ 0.7
SPENQ96T58 DGCR6L-202ENST00000405465 962 ntTSL 3 BASIC19.43■□□□□ 0.7
SPENQ96T58 POU2F2-208ENST00000529952 1716 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
SPENQ96T58 DHRS4L2-204ENST00000537912 918 ntTSL 2 BASIC19.42■□□□□ 0.7
SPENQ96T58 PLEKHJ1-205ENST00000587394 937 ntTSL 2 BASIC19.42■□□□□ 0.7
SPENQ96T58 MMD2-204ENST00000612910 778 ntTSL 5 BASIC19.42■□□□□ 0.7
SPENQ96T58 GGTLC3-201ENST00000619998 968 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
SPENQ96T58 ACADS-202ENST00000411593 1398 ntTSL 2 BASIC19.42■□□□□ 0.7
SPENQ96T58 AP000785.1-201ENST00000527314 613 ntTSL 4 BASIC19.42■□□□□ 0.7
SPENQ96T58 PGF-206ENST00000555567 1927 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
SPENQ96T58 PTPA-202ENST00000347048 1989 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
SPENQ96T58 AGBL5-201ENST00000323064 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
SPENQ96T58 SOCS7-202ENST00000613678 1827 ntTSL 5 BASIC19.41■□□□□ 0.7
SPENQ96T58 GNAS-AS1-201ENST00000424094 1156 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
SPENQ96T58 SEC23A-213ENST00000557280 561 ntTSL 4 BASIC19.41■□□□□ 0.7
SPENQ96T58 AC073648.6-201ENST00000641589 218 ntBASIC19.41■□□□□ 0.7
SPENQ96T58 QPCT-201ENST00000338415 1739 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
SPENQ96T58 CTBP1-203ENST00000382952 2467 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
SPENQ96T58 TMCC2-209ENST00000637895 1455 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
SPENQ96T58 TPM1-204ENST00000334895 1637 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
SPENQ96T58 ASCL2-201ENST00000331289 1852 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
SPENQ96T58 BCAT2-208ENST00000598162 1329 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
SPENQ96T58 EN1-201ENST00000295206 2457 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 11.2 ms