Protein–RNA interactions for Protein: Q96NY8

NECTIN4, Nectin-4, humanhuman

Predictions only

Length 510 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NECTIN4Q96NY8 DNAJA4-210ENST00000489435 947 ntTSL 3 BASIC22.32■■□□□ 1.16
NECTIN4Q96NY8 SCARA5-203ENST00000518030 1074 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
NECTIN4Q96NY8 UNC93B6-201ENST00000525262 1143 ntTSL 5 BASIC22.32■■□□□ 1.16
NECTIN4Q96NY8 ZNF324-202ENST00000535298 1006 ntTSL 5 BASIC22.32■■□□□ 1.16
NECTIN4Q96NY8 AC016405.3-201ENST00000607710 860 ntBASIC22.32■■□□□ 1.16
NECTIN4Q96NY8 DHPS-223ENST00000614126 1124 ntTSL 5 BASIC22.32■■□□□ 1.16
NECTIN4Q96NY8 AC120498.10-201ENST00000621827 505 ntBASIC22.32■■□□□ 1.16
NECTIN4Q96NY8 PACRGL-227ENST00000513459 1773 ntTSL 5 BASIC22.32■■□□□ 1.16
NECTIN4Q96NY8 HOXC8-201ENST00000040584 1889 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
NECTIN4Q96NY8 SIN3B-209ENST00000596802 2556 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
NECTIN4Q96NY8 NOC4L-201ENST00000330579 1632 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
NECTIN4Q96NY8 SLC26A5-209ENST00000393735 1947 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
NECTIN4Q96NY8 SH2D3A-202ENST00000437152 2013 ntTSL 2 BASIC22.31■■□□□ 1.16
NECTIN4Q96NY8 KCNIP1-203ENST00000390656 2249 ntTSL 5 BASIC22.31■■□□□ 1.16
NECTIN4Q96NY8 ALDH16A1-203ENST00000540132 2174 ntTSL 2 BASIC22.31■■□□□ 1.16
NECTIN4Q96NY8 HAS1-205ENST00000601714 2086 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
NECTIN4Q96NY8 CLN3-240ENST00000631023 1586 ntTSL 5 BASIC22.31■■□□□ 1.16
NECTIN4Q96NY8 RARRES1-204ENST00000479756 839 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
NECTIN4Q96NY8 AC021660.2-201ENST00000502999 388 ntTSL 3 BASIC22.31■■□□□ 1.16
NECTIN4Q96NY8 BEX2-204ENST00000536889 1077 ntTSL 2 BASIC22.31■■□□□ 1.16
NECTIN4Q96NY8 C14orf28-204ENST00000557112 1097 ntTSL 5 BASIC22.31■■□□□ 1.16
NECTIN4Q96NY8 AC083880.1-201ENST00000608266 535 ntBASIC22.31■■□□□ 1.16
NECTIN4Q96NY8 BX649632.1-201ENST00000610187 819 ntTSL 3 BASIC22.31■■□□□ 1.16
NECTIN4Q96NY8 MYC-209ENST00000641252 345 ntBASIC22.31■■□□□ 1.16
NECTIN4Q96NY8 NFKBID-201ENST00000396901 1834 ntAPPRIS P2 TSL 1 (best) BASIC22.31■■□□□ 1.16
NECTIN4Q96NY8 MFSD7-203ENST00000404286 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC22.31■■□□□ 1.16
NECTIN4Q96NY8 NFKBID-211ENST00000641389 1834 ntAPPRIS ALT2 BASIC22.31■■□□□ 1.16
NECTIN4Q96NY8 NRXN1-205ENST00000401710 2873 ntTSL 5 BASIC22.31■■□□□ 1.16
NECTIN4Q96NY8 AC004812.2-201ENST00000611079 2094 ntBASIC22.3■■□□□ 1.16
NECTIN4Q96NY8 ETS1-201ENST00000319397 2231 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
NECTIN4Q96NY8 BAALC-201ENST00000297574 801 ntTSL 3 BASIC22.3■■□□□ 1.16
NECTIN4Q96NY8 SSNA1-201ENST00000322310 896 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
NECTIN4Q96NY8 ASIP-201ENST00000374954 586 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
NECTIN4Q96NY8 ASMTL-AS1-203ENST00000425740 840 ntTSL 2 BASIC22.3■■□□□ 1.16
NECTIN4Q96NY8 PLLP-204ENST00000569059 665 ntTSL 3 BASIC22.3■■□□□ 1.16
NECTIN4Q96NY8 LYRM1-201ENST00000219168 1626 ntAPPRIS P1 TSL 2 BASIC22.3■■□□□ 1.16
NECTIN4Q96NY8 PRR7-202ENST00000502922 1345 ntAPPRIS P1 TSL 2 BASIC22.3■■□□□ 1.16
NECTIN4Q96NY8 AP000547.3-201ENST00000592918 1576 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
NECTIN4Q96NY8 GPX1-204ENST00000620890 897 ntAPPRIS ALT2 TSL 5 BASIC22.29■■□□□ 1.16
NECTIN4Q96NY8 GDF6-203ENST00000621429 1179 ntTSL 5 BASIC22.29■■□□□ 1.16
NECTIN4Q96NY8 MFSD3-201ENST00000301327 1548 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
NECTIN4Q96NY8 KCNA2-206ENST00000638477 1524 ntTSL 5 BASIC22.29■■□□□ 1.16
NECTIN4Q96NY8 SNTA1-201ENST00000217381 2342 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
NECTIN4Q96NY8 LINC01124-201ENST00000409786 2117 ntBASIC22.28■■□□□ 1.16
NECTIN4Q96NY8 KLC3-204ENST00000585434 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC22.28■■□□□ 1.16
NECTIN4Q96NY8 CDCA4-202ENST00000392590 1536 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
NECTIN4Q96NY8 RASSF5-202ENST00000579436 2064 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
NECTIN4Q96NY8 RNPS1-201ENST00000301730 1276 ntAPPRIS P1 TSL 2 BASIC22.28■■□□□ 1.16
NECTIN4Q96NY8 AC105001.1-201ENST00000506149 821 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
NECTIN4Q96NY8 DPP7-201ENST00000371579 1590 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
NECTIN4Q96NY8 DDN-AS1-202ENST00000547866 2114 ntTSL 3 BASIC22.28■■□□□ 1.16
NECTIN4Q96NY8 NPAS1-208ENST00000602212 2117 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
NECTIN4Q96NY8 D2HGDH-203ENST00000403782 2208 ntTSL 2 BASIC22.27■■□□□ 1.16
NECTIN4Q96NY8 IFNGR2-203ENST00000405436 1684 ntTSL 5 BASIC22.27■■□□□ 1.16
NECTIN4Q96NY8 TTBK2-207ENST00000567840 1961 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
NECTIN4Q96NY8 C16orf74-201ENST00000284245 906 ntAPPRIS P2 TSL 1 (best) BASIC22.27■■□□□ 1.16
NECTIN4Q96NY8 CD58-201ENST00000369487 892 ntAPPRIS ALT2 TSL 1 (best) BASIC22.27■■□□□ 1.16
NECTIN4Q96NY8 CD58-202ENST00000369489 1098 ntAPPRIS P3 TSL 1 (best) BASIC22.27■■□□□ 1.16
NECTIN4Q96NY8 AC025754.1-201ENST00000507566 407 ntTSL 3 BASIC22.27■■□□□ 1.16
NECTIN4Q96NY8 OR7E47P-201ENST00000546390 1422 ntBASIC22.27■■□□□ 1.16
NECTIN4Q96NY8 AC106738.2-202ENST00000558156 533 ntTSL 4 BASIC22.27■■□□□ 1.16
NECTIN4Q96NY8 FASTK-217ENST00000540185 1609 ntTSL 5 BASIC22.27■■□□□ 1.16
NECTIN4Q96NY8 SPR-201ENST00000234454 1480 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
NECTIN4Q96NY8 LGALS9B-202ENST00000423676 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC22.26■■□□□ 1.15
NECTIN4Q96NY8 SEC61A2-206ENST00000379051 707 ntTSL 3 BASIC22.26■■□□□ 1.15
NECTIN4Q96NY8 GAS7-202ENST00000396115 929 ntTSL 5 BASIC22.26■■□□□ 1.15
NECTIN4Q96NY8 ANKRD65-202ENST00000442470 876 ntTSL 2 BASIC22.26■■□□□ 1.15
NECTIN4Q96NY8 NREP-209ENST00000455559 698 ntAPPRIS P1 TSL 4 BASIC22.26■■□□□ 1.15
NECTIN4Q96NY8 ATPIF1-203ENST00000468425 539 ntTSL 2 BASIC22.26■■□□□ 1.15
NECTIN4Q96NY8 TMEM9B-203ENST00000528117 949 ntTSL 2 BASIC22.26■■□□□ 1.15
NECTIN4Q96NY8 C12orf43-208ENST00000539736 1033 ntAPPRIS ALT2 TSL 2 BASIC22.26■■□□□ 1.15
NECTIN4Q96NY8 AL162412.1-201ENST00000567129 965 ntBASIC22.26■■□□□ 1.15
NECTIN4Q96NY8 GPR161-203ENST00000367836 1983 ntTSL 2 BASIC22.26■■□□□ 1.15
NECTIN4Q96NY8 ZFYVE28-202ENST00000503000 1874 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
NECTIN4Q96NY8 ADRM1-204ENST00000491935 1530 ntAPPRIS P1 TSL 5 BASIC22.26■■□□□ 1.15
NECTIN4Q96NY8 VPS29-206ENST00000549578 1523 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
NECTIN4Q96NY8 KRT10-201ENST00000269576 2124 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
NECTIN4Q96NY8 NIPSNAP2-201ENST00000322090 1999 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
NECTIN4Q96NY8 KCTD15-207ENST00000589786 1625 ntAPPRIS P1 TSL 2 BASIC22.25■■□□□ 1.15
NECTIN4Q96NY8 PLEKHB1-201ENST00000227214 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC22.25■■□□□ 1.15
NECTIN4Q96NY8 PLPP7-201ENST00000372261 972 ntTSL 2 BASIC22.25■■□□□ 1.15
NECTIN4Q96NY8 AC007285.1-201ENST00000422239 893 ntTSL 5 BASIC22.25■■□□□ 1.15
NECTIN4Q96NY8 AC091874.3-201ENST00000512672 1195 ntBASIC22.25■■□□□ 1.15
NECTIN4Q96NY8 ISCU-212ENST00000547005 795 ntTSL 3 BASIC22.25■■□□□ 1.15
NECTIN4Q96NY8 LYRM1-205ENST00000562740 931 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
NECTIN4Q96NY8 AC008175.2-201ENST00000612840 297 ntBASIC22.25■■□□□ 1.15
NECTIN4Q96NY8 BCL2L12-212ENST00000616144 1854 ntAPPRIS P3 TSL 1 (best) BASIC22.25■■□□□ 1.15
NECTIN4Q96NY8 SH3GL1-201ENST00000269886 2516 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
NECTIN4Q96NY8 MEIS3-212ENST00000561293 1918 ntAPPRIS P3 TSL 1 (best) BASIC22.25■■□□□ 1.15
NECTIN4Q96NY8 PTPA-202ENST00000347048 1989 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
NECTIN4Q96NY8 GNB1-210ENST00000615252 3048 ntTSL 5 BASIC22.25■■□□□ 1.15
NECTIN4Q96NY8 AC099805.1-201ENST00000523987 1797 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
NECTIN4Q96NY8 EZH2-206ENST00000478654 2522 ntTSL 5 BASIC22.24■■□□□ 1.15
NECTIN4Q96NY8 LINC01960-201ENST00000563759 1884 ntBASIC22.24■■□□□ 1.15
NECTIN4Q96NY8 PLEKHA8-202ENST00000396257 1907 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
NECTIN4Q96NY8 CBY3-201ENST00000376974 785 ntAPPRIS P1 TSL 2 BASIC22.24■■□□□ 1.15
NECTIN4Q96NY8 MMAB-206ENST00000540016 945 ntTSL 3 BASIC22.24■■□□□ 1.15
NECTIN4Q96NY8 AC142381.4-202ENST00000563973 229 ntBASIC22.24■■□□□ 1.15
NECTIN4Q96NY8 TXNL4A-203ENST00000585474 1185 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
NECTIN4Q96NY8 AC006058.3-201ENST00000606217 1069 ntBASIC22.24■■□□□ 1.15
Retrieved 100 of 98,524 protein–RNA pairs in 27.4 ms