Protein–RNA interactions for Protein: Q96KA5

CLPTM1L, Cleft lip and palate transmembrane protein 1-like protein, humanhuman

Predictions only

Length 538 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1LQ96KA5 GPSM1-201ENST00000291775 2114 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
CLPTM1LQ96KA5 STMN4-201ENST00000265770 1250 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CLPTM1LQ96KA5 GBX1-201ENST00000297537 1092 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CLPTM1LQ96KA5 HYI-210ENST00000486909 905 ntTSL 5 BASIC20.53■□□□□ 0.88
CLPTM1LQ96KA5 DUX4L4-201ENST00000566884 1269 ntBASIC20.53■□□□□ 0.88
CLPTM1LQ96KA5 NDUFAF6-203ENST00000396124 1798 ntAPPRIS P1 TSL 2 BASIC20.53■□□□□ 0.88
CLPTM1LQ96KA5 FDXR-201ENST00000293195 1875 ntAPPRIS ALT1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CLPTM1LQ96KA5 BRSK1-201ENST00000309383 3079 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CLPTM1LQ96KA5 SUSD1-204ENST00000374270 3124 ntAPPRIS P3 TSL 1 (best) BASIC20.53■□□□□ 0.88
CLPTM1LQ96KA5 FAM91A1-207ENST00000521166 2706 ntTSL 2 BASIC20.53■□□□□ 0.88
CLPTM1LQ96KA5 BAZ1A-202ENST00000360310 6010 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
CLPTM1LQ96KA5 TOR1B-201ENST00000259339 2769 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
CLPTM1LQ96KA5 SACM1L-202ENST00000418611 2164 ntTSL 2 BASIC20.52■□□□□ 0.88
CLPTM1LQ96KA5 PITX2-201ENST00000306732 2320 ntAPPRIS P4 TSL 1 (best) BASIC20.52■□□□□ 0.88
CLPTM1LQ96KA5 ZSCAN1-202ENST00000391700 952 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
CLPTM1LQ96KA5 TMEM147-203ENST00000392205 767 ntTSL 2 BASIC20.52■□□□□ 0.88
CLPTM1LQ96KA5 IL17RC-205ENST00000413608 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
CLPTM1LQ96KA5 E4F1-206ENST00000565090 2028 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
CLPTM1LQ96KA5 IKBKG-212ENST00000617207 1949 ntAPPRIS ALT1 TSL 3 BASIC20.52■□□□□ 0.88
CLPTM1LQ96KA5 SLC35A2-210ENST00000616181 1614 ntTSL 2 BASIC20.52■□□□□ 0.88
CLPTM1LQ96KA5 ZC3HAV1L-201ENST00000275766 1753 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
CLPTM1LQ96KA5 TTC7A-201ENST00000319190 5157 ntAPPRIS P1 TSL 2 BASIC20.51■□□□□ 0.87
CLPTM1LQ96KA5 RARG-201ENST00000338561 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC20.51■□□□□ 0.87
CLPTM1LQ96KA5 AC016065.1-201ENST00000500118 2413 ntTSL 2 BASIC20.51■□□□□ 0.87
CLPTM1LQ96KA5 SNX5-217ENST00000606557 1087 ntBASIC20.51■□□□□ 0.87
CLPTM1LQ96KA5 PCMT1-205ENST00000464889 1984 ntAPPRIS P3 TSL 1 (best) BASIC20.51■□□□□ 0.87
CLPTM1LQ96KA5 TSNAXIP1-202ENST00000415766 2338 ntAPPRIS ALT2 TSL 2 BASIC20.51■□□□□ 0.87
CLPTM1LQ96KA5 C18orf25-204ENST00000615553 2329 ntTSL 5 BASIC20.51■□□□□ 0.87
CLPTM1LQ96KA5 CBLN2-201ENST00000269503 2945 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
CLPTM1LQ96KA5 PANK1-201ENST00000307534 6976 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
CLPTM1LQ96KA5 NAE1-204ENST00000394074 1654 ntTSL 5 BASIC20.51■□□□□ 0.87
CLPTM1LQ96KA5 RTP5-201ENST00000343216 2296 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
CLPTM1LQ96KA5 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC20.51■□□□□ 0.87
CLPTM1LQ96KA5 TMEM51-203ENST00000400796 1842 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
CLPTM1LQ96KA5 SET-201ENST00000322030 2915 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
CLPTM1LQ96KA5 ISLR2-204ENST00000453268 2812 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
CLPTM1LQ96KA5 SH3RF3-AS1-201ENST00000567491 1604 ntBASIC20.5■□□□□ 0.87
CLPTM1LQ96KA5 CBWD1-203ENST00000377400 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
CLPTM1LQ96KA5 SMPDL3A-203ENST00000539041 1755 ntTSL 2 BASIC20.5■□□□□ 0.87
CLPTM1LQ96KA5 NKX2-8-201ENST00000258829 1261 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
CLPTM1LQ96KA5 KRT18P24-201ENST00000344739 1156 ntBASIC20.5■□□□□ 0.87
CLPTM1LQ96KA5 RSPO4-202ENST00000400634 722 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
CLPTM1LQ96KA5 MTX2-204ENST00000443241 799 ntTSL 3 BASIC20.5■□□□□ 0.87
CLPTM1LQ96KA5 AC139795.1-203ENST00000515045 853 ntTSL 2 BASIC20.5■□□□□ 0.87
CLPTM1LQ96KA5 TTBK1-202ENST00000304139 2449 ntTSL 5 BASIC20.5■□□□□ 0.87
CLPTM1LQ96KA5 CHRAC1-203ENST00000519533 1678 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
CLPTM1LQ96KA5 SENP5-204ENST00000445299 2491 ntTSL 2 BASIC20.5■□□□□ 0.87
CLPTM1LQ96KA5 CADPS-202ENST00000357948 5190 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
CLPTM1LQ96KA5 FIP1L1-201ENST00000306932 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
CLPTM1LQ96KA5 AC074143.1-203ENST00000518227 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
CLPTM1LQ96KA5 SNRNP70-201ENST00000221448 1603 ntTSL 2 BASIC20.49■□□□□ 0.87
CLPTM1LQ96KA5 REV1-201ENST00000258428 4751 ntAPPRIS P3 TSL 1 (best) BASIC20.49■□□□□ 0.87
CLPTM1LQ96KA5 RPP38-207ENST00000616640 1537 ntAPPRIS P1 TSL 2 BASIC20.49■□□□□ 0.87
CLPTM1LQ96KA5 PARD3-207ENST00000374788 5996 ntAPPRIS ALT1 TSL 1 (best) BASIC20.49■□□□□ 0.87
CLPTM1LQ96KA5 APBB3-203ENST00000357560 2218 ntAPPRIS P3 TSL 5 BASIC20.49■□□□□ 0.87
CLPTM1LQ96KA5 FGFR2-224ENST00000613048 4369 ntTSL 5 BASIC20.49■□□□□ 0.87
CLPTM1LQ96KA5 IFI30-201ENST00000407280 1134 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
CLPTM1LQ96KA5 CT47A7-201ENST00000434883 1288 ntAPPRIS P1 TSL 2 BASIC20.49■□□□□ 0.87
CLPTM1LQ96KA5 U85056.1-201ENST00000616429 682 ntBASIC20.49■□□□□ 0.87
CLPTM1LQ96KA5 GNAS-AS1_1.1-201ENST00000621898 103 ntBASIC20.49■□□□□ 0.87
CLPTM1LQ96KA5 PIF1-202ENST00000333425 2278 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
CLPTM1LQ96KA5 NYX-202ENST00000378220 2297 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
CLPTM1LQ96KA5 LINC01116-201ENST00000295549 1407 ntTSL 2 BASIC20.49■□□□□ 0.87
CLPTM1LQ96KA5 MFSD7-202ENST00000347950 1599 ntTSL 2 BASIC20.49■□□□□ 0.87
CLPTM1LQ96KA5 CCDC106-207ENST00000591578 1592 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
CLPTM1LQ96KA5 LGR4-202ENST00000389858 5163 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
CLPTM1LQ96KA5 PCED1A-202ENST00000360652 2016 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
CLPTM1LQ96KA5 MRPS2-202ENST00000371785 1640 ntAPPRIS P1 TSL 3 BASIC20.49■□□□□ 0.87
CLPTM1LQ96KA5 CITED2-203ENST00000537332 1780 ntTSL 3 BASIC20.49■□□□□ 0.87
CLPTM1LQ96KA5 IRF7-204ENST00000397570 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
CLPTM1LQ96KA5 GJC2-201ENST00000366714 2243 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
CLPTM1LQ96KA5 SUSD1-203ENST00000374264 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
CLPTM1LQ96KA5 TEAD2-208ENST00000598810 2191 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
CLPTM1LQ96KA5 CRMP1-201ENST00000324989 3146 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
CLPTM1LQ96KA5 CCKBR-206ENST00000532715 1734 ntTSL 3 BASIC20.48■□□□□ 0.87
CLPTM1LQ96KA5 LGALS9B-201ENST00000324290 1243 ntAPPRIS P2 TSL 5 BASIC20.48■□□□□ 0.87
CLPTM1LQ96KA5 YIPF2-201ENST00000253031 2087 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
CLPTM1LQ96KA5 ADM-207ENST00000530439 1839 ntTSL 2 BASIC20.48■□□□□ 0.87
CLPTM1LQ96KA5 EPCAM-202ENST00000405271 1530 ntTSL 5 BASIC20.48■□□□□ 0.87
CLPTM1LQ96KA5 BRD4-202ENST00000360016 3240 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
CLPTM1LQ96KA5 CSPG5-201ENST00000264723 4080 ntAPPRIS P3 TSL 1 (best) BASIC20.48■□□□□ 0.87
CLPTM1LQ96KA5 CORO1B-202ENST00000393893 1931 ntAPPRIS P1 TSL 5 BASIC20.47■□□□□ 0.87
CLPTM1LQ96KA5 TDRD10-202ENST00000368482 2331 ntAPPRIS P3 TSL 1 (best) BASIC20.47■□□□□ 0.87
CLPTM1LQ96KA5 FSTL3-201ENST00000166139 2542 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
CLPTM1LQ96KA5 TBX2-AS1-203ENST00000590421 861 ntTSL 2 BASIC20.47■□□□□ 0.87
CLPTM1LQ96KA5 DUSP26-201ENST00000256261 1835 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
CLPTM1LQ96KA5 C10orf91-202ENST00000392630 1846 ntTSL 2 BASIC20.47■□□□□ 0.87
CLPTM1LQ96KA5 CDC14B-203ENST00000375242 2965 ntTSL 2 BASIC20.47■□□□□ 0.87
CLPTM1LQ96KA5 KCNN1-204ENST00000615435 1691 ntAPPRIS ALT1 TSL 5 BASIC20.47■□□□□ 0.87
CLPTM1LQ96KA5 ZNF800-208ENST00000619291 2099 ntTSL 5 BASIC20.47■□□□□ 0.87
CLPTM1LQ96KA5 C6orf89-201ENST00000355190 1309 ntAPPRIS P3 TSL 1 (best) BASIC20.47■□□□□ 0.87
CLPTM1LQ96KA5 STAP2-206ENST00000600324 1508 ntAPPRIS P3 TSL 2 BASIC20.47■□□□□ 0.87
CLPTM1LQ96KA5 RBAK-202ENST00000396912 6551 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
CLPTM1LQ96KA5 TMEM8A-204ENST00000431232 3691 ntAPPRIS P2 TSL 1 (best) BASIC20.47■□□□□ 0.87
CLPTM1LQ96KA5 MARK2-208ENST00000508192 2924 ntAPPRIS P3 TSL 5 BASIC20.47■□□□□ 0.87
CLPTM1LQ96KA5 NAA35-202ENST00000376040 1797 ntTSL 2 BASIC20.46■□□□□ 0.87
CLPTM1LQ96KA5 CCDC47-202ENST00000403162 2195 ntAPPRIS P1 TSL 2 BASIC20.46■□□□□ 0.87
CLPTM1LQ96KA5 HAND2-AS1-237ENST00000616485 2420 ntTSL 2 BASIC20.46■□□□□ 0.87
CLPTM1LQ96KA5 ZNF503-AS2-202ENST00000466942 1430 ntTSL 2 BASIC20.46■□□□□ 0.87
CLPTM1LQ96KA5 TUBA4A-202ENST00000392088 2499 ntTSL 2 BASIC20.46■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 27.8 ms