Protein–RNA interactions for Protein: Q96J02

ITCH, E3 ubiquitin-protein ligase Itchy homolog, humanhuman

Predictions only

Length 903 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ITCHQ96J02 DUSP9-202ENST00000370167 2289 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
ITCHQ96J02 PXK-211ENST00000484288 2031 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
ITCHQ96J02 NAA35-202ENST00000376040 1797 ntTSL 2 BASIC20.34■□□□□ 0.85
ITCHQ96J02 GALNT8-202ENST00000433855 5977 ntTSL 2 BASIC20.34■□□□□ 0.85
ITCHQ96J02 OLFM1-204ENST00000371793 2444 ntAPPRIS P1 TSL 3 BASIC20.34■□□□□ 0.85
ITCHQ96J02 DLEU2-208ENST00000621282 3068 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
ITCHQ96J02 FEM1AP4-201ENST00000443167 1987 ntBASIC20.34■□□□□ 0.85
ITCHQ96J02 IMPA2-201ENST00000269159 1534 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
ITCHQ96J02 DTWD2-204ENST00000515439 1275 ntTSL 5 BASIC20.34■□□□□ 0.85
ITCHQ96J02 AC009506.1-201ENST00000418474 1494 ntTSL 2 BASIC20.34■□□□□ 0.85
ITCHQ96J02 SMARCD2-203ENST00000448276 2716 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
ITCHQ96J02 PNMA2-204ENST00000522362 4965 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
ITCHQ96J02 ZNF668-209ENST00000539836 2469 ntTSL 5 BASIC20.34■□□□□ 0.85
ITCHQ96J02 DUSP9-201ENST00000342782 2433 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
ITCHQ96J02 PSIP1-201ENST00000380715 1966 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
ITCHQ96J02 XBP1-207ENST00000611155 1794 ntTSL 5 BASIC20.34■□□□□ 0.85
ITCHQ96J02 GPSM1-201ENST00000291775 2114 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
ITCHQ96J02 PPP1R12B-212ENST00000480184 1808 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
ITCHQ96J02 MIR17HG-201ENST00000400282 931 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
ITCHQ96J02 AC019163.1-201ENST00000512634 610 ntTSL 2 BASIC20.33■□□□□ 0.85
ITCHQ96J02 AC096887.1-203ENST00000607203 768 ntAPPRIS ALT2 TSL 5 BASIC20.33■□□□□ 0.85
ITCHQ96J02 NUDT16L1-204ENST00000586536 1406 ntTSL 2 BASIC20.33■□□□□ 0.84
ITCHQ96J02 TPST1-201ENST00000304842 2116 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
ITCHQ96J02 GLT1D1-204ENST00000442111 2995 ntAPPRIS P1 TSL 5 BASIC20.33■□□□□ 0.84
ITCHQ96J02 GNS-207ENST00000542058 2020 ntAPPRIS ALT2 TSL 2 BASIC20.32■□□□□ 0.84
ITCHQ96J02 LSM14A-202ENST00000540746 2152 ntTSL 2 BASIC20.32■□□□□ 0.84
ITCHQ96J02 PMPCA-203ENST00000399219 1987 ntTSL 2 BASIC20.32■□□□□ 0.84
ITCHQ96J02 ZNF652-202ENST00000430262 4701 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
ITCHQ96J02 DAZAP2-201ENST00000412716 2598 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
ITCHQ96J02 AL122058.1-201ENST00000412321 1166 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
ITCHQ96J02 NDUFAF8-201ENST00000431388 615 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
ITCHQ96J02 AC103702.2-201ENST00000433510 1270 ntTSL 2 BASIC20.32■□□□□ 0.84
ITCHQ96J02 CCDC189-211ENST00000545825 1046 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
ITCHQ96J02 KRAS-204ENST00000557334 1052 ntTSL 5 BASIC20.32■□□□□ 0.84
ITCHQ96J02 FIZ1-205ENST00000592585 489 ntTSL 5 BASIC20.32■□□□□ 0.84
ITCHQ96J02 AC092171.4-201ENST00000609130 632 ntBASIC20.32■□□□□ 0.84
ITCHQ96J02 CDV3-201ENST00000264993 3307 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
ITCHQ96J02 MFSD7-209ENST00000515118 1556 ntTSL 5 BASIC20.32■□□□□ 0.84
ITCHQ96J02 TLE3-216ENST00000559191 1575 ntTSL 5 BASIC20.32■□□□□ 0.84
ITCHQ96J02 SCRN2-212ENST00000584123 1745 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
ITCHQ96J02 MSANTD1-204ENST00000510580 2039 ntTSL 5 BASIC20.32■□□□□ 0.84
ITCHQ96J02 SNUPN-201ENST00000308588 1513 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
ITCHQ96J02 TIMM50-201ENST00000314349 1612 ntAPPRIS P2 TSL 1 (best) BASIC20.31■□□□□ 0.84
ITCHQ96J02 RAB11FIP4-211ENST00000621161 8628 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
ITCHQ96J02 C2CD4B-201ENST00000380392 1579 ntAPPRIS P1 TSL 2 BASIC20.31■□□□□ 0.84
ITCHQ96J02 EPDR1-201ENST00000199448 2599 ntAPPRIS P3 TSL 1 (best) BASIC20.31■□□□□ 0.84
ITCHQ96J02 AC010141.3-201ENST00000456659 717 ntBASIC20.31■□□□□ 0.84
ITCHQ96J02 MIR3621-201ENST00000580529 85 ntBASIC20.31■□□□□ 0.84
ITCHQ96J02 ZEB1-AS1-205ENST00000605946 382 ntTSL 5 BASIC20.31■□□□□ 0.84
ITCHQ96J02 CCDC194-202ENST00000636079 705 ntAPPRIS P1 TSL 5 BASIC20.31■□□□□ 0.84
ITCHQ96J02 LMAN2-201ENST00000303127 1800 ntAPPRIS P2 TSL 1 (best) BASIC20.31■□□□□ 0.84
ITCHQ96J02 PMS1-222ENST00000639501 2506 ntTSL 5 BASIC20.31■□□□□ 0.84
ITCHQ96J02 PRICKLE3-206ENST00000599218 2062 ntAPPRIS P3 TSL 1 (best) BASIC20.31■□□□□ 0.84
ITCHQ96J02 NUDT10-201ENST00000356450 1917 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
ITCHQ96J02 B4GALNT1-203ENST00000449184 1633 ntTSL 2 BASIC20.31■□□□□ 0.84
ITCHQ96J02 CPEB1-AS1-201ENST00000560650 2138 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
ITCHQ96J02 PBX4-201ENST00000251203 1724 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
ITCHQ96J02 PRR16-202ENST00000407149 1747 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
ITCHQ96J02 HLA-C-203ENST00000383329 1554 ntAPPRIS ALT2 BASIC20.3■□□□□ 0.84
ITCHQ96J02 MTMR14-206ENST00000420925 1427 ntAPPRIS ALT2 TSL 2 BASIC20.3■□□□□ 0.84
ITCHQ96J02 B3GALT4-204ENST00000451237 1694 ntAPPRIS P1 BASIC20.3■□□□□ 0.84
ITCHQ96J02 ACYP2-202ENST00000394666 993 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
ITCHQ96J02 SRD5A1P1-201ENST00000442297 786 ntBASIC20.3■□□□□ 0.84
ITCHQ96J02 PABPN1-207ENST00000556821 1220 ntTSL 2 BASIC20.3■□□□□ 0.84
ITCHQ96J02 CFD-202ENST00000592860 809 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
ITCHQ96J02 AC018553.2-201ENST00000637770 1064 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
ITCHQ96J02 TTYH1-203ENST00000376531 1763 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
ITCHQ96J02 SETD6-202ENST00000310682 2042 ntAPPRIS P3 TSL 2 BASIC20.3■□□□□ 0.84
ITCHQ96J02 ALDH6A1-201ENST00000350259 1869 ntAPPRIS ALT2 TSL 2 BASIC20.3■□□□□ 0.84
ITCHQ96J02 EEF1D-204ENST00000423316 2378 ntAPPRIS P4 TSL 5 BASIC20.3■□□□□ 0.84
ITCHQ96J02 ESR2-204ENST00000353772 2454 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
ITCHQ96J02 MFF-203ENST00000349901 1716 ntTSL 2 BASIC20.3■□□□□ 0.84
ITCHQ96J02 ADAP2-204ENST00000580525 1598 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
ITCHQ96J02 CCSAP-203ENST00000366687 5089 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
ITCHQ96J02 HSPB2-201ENST00000304298 1335 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
ITCHQ96J02 TBX1-203ENST00000359500 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
ITCHQ96J02 RNF166-202ENST00000537718 1525 ntTSL 2 BASIC20.29■□□□□ 0.84
ITCHQ96J02 ZNF302-211ENST00000509528 577 ntTSL 4 BASIC20.29■□□□□ 0.84
ITCHQ96J02 PCSK6-217ENST00000618548 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
ITCHQ96J02 SLC1A6-203ENST00000544886 2420 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
ITCHQ96J02 EPN1-201ENST00000085079 2355 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
ITCHQ96J02 SYNGR2-203ENST00000588282 1553 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
ITCHQ96J02 ARID1B-220ENST00000636930 8246 ntAPPRIS ALT2 TSL 2 BASIC20.29■□□□□ 0.84
ITCHQ96J02 HSF2BP-201ENST00000291560 1899 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
ITCHQ96J02 ARSA-202ENST00000356098 1895 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
ITCHQ96J02 PPP1R3F-203ENST00000466508 1885 ntTSL 2 BASIC20.28■□□□□ 0.84
ITCHQ96J02 DCK-201ENST00000286648 2716 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
ITCHQ96J02 C8orf82-201ENST00000313465 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
ITCHQ96J02 MYCBPAP-202ENST00000419930 1640 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
ITCHQ96J02 TMEM98-206ENST00000579849 4434 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
ITCHQ96J02 AF106564.1-201ENST00000607058 2553 ntBASIC20.28■□□□□ 0.84
ITCHQ96J02 CACNA1B-201ENST00000277549 7158 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
ITCHQ96J02 CACNA1B-202ENST00000277551 7158 ntAPPRIS ALT2 TSL 5 BASIC20.28■□□□□ 0.84
ITCHQ96J02 SLC1A5-203ENST00000542575 2882 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
ITCHQ96J02 DRAP1-201ENST00000312515 989 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
ITCHQ96J02 PAXIP1-202ENST00000404141 3827 ntAPPRIS P1 TSL 5 BASIC20.28■□□□□ 0.84
ITCHQ96J02 DPP10-AS1-201ENST00000432658 730 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
ITCHQ96J02 CDKN2A-208ENST00000498124 880 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
ITCHQ96J02 AL117336.3-202ENST00000605499 489 ntTSL 3 BASIC20.28■□□□□ 0.84
ITCHQ96J02 LY6H-205ENST00000615409 980 ntAPPRIS P3 TSL 1 (best) BASIC20.28■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 23.3 ms