Protein–RNA interactions for Protein: Q96FZ7

CHMP6, Charged multivesicular body protein 6, humanhuman

Predictions only

Length 201 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP6Q96FZ7 RNF32-207ENST00000405335 1938 ntAPPRIS P1 TSL 5 BASIC21.5■■□□□ 1.03
CHMP6Q96FZ7 ZFAND2B-201ENST00000289528 1314 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
CHMP6Q96FZ7 SIMC1-203ENST00000429602 2694 ntAPPRIS ALT2 TSL 1 (best) BASIC21.5■■□□□ 1.03
CHMP6Q96FZ7 HSF2BP-201ENST00000291560 1899 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
CHMP6Q96FZ7 TRAPPC5-204ENST00000596148 5498 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
CHMP6Q96FZ7 SNUPN-205ENST00000564644 1931 ntAPPRIS P1 TSL 2 BASIC21.49■■□□□ 1.03
CHMP6Q96FZ7 TUBGCP3-204ENST00000464139 2461 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
CHMP6Q96FZ7 POMGNT1-201ENST00000371984 2728 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
CHMP6Q96FZ7 ANKRD16-203ENST00000380094 2738 ntAPPRIS P1 TSL 2 BASIC21.49■■□□□ 1.03
CHMP6Q96FZ7 CERS4-205ENST00000558331 1803 ntTSL 5 BASIC21.49■■□□□ 1.03
CHMP6Q96FZ7 FAM129C-203ENST00000449408 2004 ntAPPRIS ALT2 TSL 2 BASIC21.49■■□□□ 1.03
CHMP6Q96FZ7 DBP-201ENST00000222122 2229 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
CHMP6Q96FZ7 SMOC2-206ENST00000535039 1875 ntTSL 5 BASIC21.49■■□□□ 1.03
CHMP6Q96FZ7 PAOX-206ENST00000480071 1324 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
CHMP6Q96FZ7 USP36-203ENST00000542802 6063 ntAPPRIS P2 TSL 1 (best) BASIC21.49■■□□□ 1.03
CHMP6Q96FZ7 STEAP2-207ENST00000402625 1372 ntTSL 5 BASIC21.48■■□□□ 1.03
CHMP6Q96FZ7 SACM1L-202ENST00000418611 2164 ntTSL 2 BASIC21.48■■□□□ 1.03
CHMP6Q96FZ7 ARFRP1-210ENST00000614942 2554 ntTSL 5 BASIC21.48■■□□□ 1.03
CHMP6Q96FZ7 AC011498.4-201ENST00000586020 1803 ntAPPRIS P1 TSL 2 BASIC21.48■■□□□ 1.03
CHMP6Q96FZ7 GTPBP3-222ENST00000600625 2493 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
CHMP6Q96FZ7 TSPAN10-204ENST00000611590 1068 ntAPPRIS ALT2 TSL 1 (best) BASIC21.48■■□□□ 1.03
CHMP6Q96FZ7 DISC1-215ENST00000602281 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC21.48■■□□□ 1.03
CHMP6Q96FZ7 NNT-AS1-206ENST00000606697 1945 ntTSL 2 BASIC21.48■■□□□ 1.03
CHMP6Q96FZ7 NUDT11-201ENST00000375992 2385 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
CHMP6Q96FZ7 NDUFAF6-203ENST00000396124 1798 ntAPPRIS P1 TSL 2 BASIC21.48■■□□□ 1.03
CHMP6Q96FZ7 ADAMTS2-202ENST00000274609 2044 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
CHMP6Q96FZ7 PFKFB3-219ENST00000640683 2311 ntTSL 5 BASIC21.47■■□□□ 1.03
CHMP6Q96FZ7 LAYN-203ENST00000436913 2590 ntTSL 2 BASIC21.47■■□□□ 1.03
CHMP6Q96FZ7 OTOP1-201ENST00000296358 1864 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
CHMP6Q96FZ7 LHFPL3-202ENST00000424859 1852 ntAPPRIS P5 TSL 1 (best) BASIC21.47■■□□□ 1.03
CHMP6Q96FZ7 RASSF1-203ENST00000359365 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC21.47■■□□□ 1.03
CHMP6Q96FZ7 CNTNAP3B-202ENST00000341990 2666 ntTSL 2 BASIC21.47■■□□□ 1.03
CHMP6Q96FZ7 IRF7-205ENST00000397574 1968 ntAPPRIS ALT2 TSL 1 (best) BASIC21.47■■□□□ 1.03
CHMP6Q96FZ7 KIRREL2-202ENST00000347900 2015 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
CHMP6Q96FZ7 C17orf67-201ENST00000397861 2013 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
CHMP6Q96FZ7 XBP1-207ENST00000611155 1794 ntTSL 5 BASIC21.47■■□□□ 1.03
CHMP6Q96FZ7 PROSER2-202ENST00000379200 1232 ntAPPRIS ALT2 BASIC21.47■■□□□ 1.03
CHMP6Q96FZ7 YBX1P4-201ENST00000392794 808 ntBASIC21.47■■□□□ 1.03
CHMP6Q96FZ7 CNPY3-202ENST00000394142 954 ntTSL 5 BASIC21.47■■□□□ 1.03
CHMP6Q96FZ7 EPHA10-211ENST00000540011 720 ntTSL 5 BASIC21.47■■□□□ 1.03
CHMP6Q96FZ7 UAP1-201ENST00000271469 2377 ntAPPRIS ALT1 TSL 5 BASIC21.47■■□□□ 1.03
CHMP6Q96FZ7 ODF3L2-201ENST00000315489 1604 ntAPPRIS P2 TSL 1 (best) BASIC21.47■■□□□ 1.03
CHMP6Q96FZ7 TRIP6-201ENST00000200457 1942 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
CHMP6Q96FZ7 AP003356.1-202ENST00000517910 2770 ntTSL 2 BASIC21.47■■□□□ 1.03
CHMP6Q96FZ7 JPT1-206ENST00000476258 2289 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
CHMP6Q96FZ7 GFER-201ENST00000248114 2345 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
CHMP6Q96FZ7 OLFM1-205ENST00000371796 2492 ntTSL 2 BASIC21.46■■□□□ 1.03
CHMP6Q96FZ7 FRMD3-204ENST00000376438 2198 ntTSL 2 BASIC21.46■■□□□ 1.03
CHMP6Q96FZ7 PRELID1-201ENST00000303204 1261 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
CHMP6Q96FZ7 ENHO-201ENST00000399775 1082 ntAPPRIS P1 TSL 2 BASIC21.46■■□□□ 1.03
CHMP6Q96FZ7 C9orf147-202ENST00000457681 561 ntTSL 2 BASIC21.46■■□□□ 1.03
CHMP6Q96FZ7 TXNRD3-204ENST00000640433 1932 ntAPPRIS P4 TSL 1 (best) BASIC21.46■■□□□ 1.03
CHMP6Q96FZ7 DISC1-202ENST00000317586 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC21.46■■□□□ 1.03
CHMP6Q96FZ7 NKX6-3-201ENST00000518699 1352 ntAPPRIS P1 TSL 5 BASIC21.46■■□□□ 1.03
CHMP6Q96FZ7 DET1-201ENST00000268148 2267 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
CHMP6Q96FZ7 CORO1B-202ENST00000393893 1931 ntAPPRIS P1 TSL 5 BASIC21.45■■□□□ 1.02
CHMP6Q96FZ7 CYP21A2-222ENST00000435122 1914 ntTSL 2 BASIC21.45■■□□□ 1.02
CHMP6Q96FZ7 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
CHMP6Q96FZ7 TPCN2-208ENST00000637342 2856 ntTSL 5 BASIC21.45■■□□□ 1.02
CHMP6Q96FZ7 UBE2B-201ENST00000265339 2515 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
CHMP6Q96FZ7 CD63-201ENST00000257857 1070 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
CHMP6Q96FZ7 AC092807.3-205ENST00000467666 531 ntTSL 3 BASIC21.45■■□□□ 1.02
CHMP6Q96FZ7 AC093390.2-201ENST00000638628 1007 ntTSL 5 BASIC21.45■■□□□ 1.02
CHMP6Q96FZ7 HSD3B7-202ENST00000297679 2172 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
CHMP6Q96FZ7 MARCH2-201ENST00000215555 1376 ntAPPRIS P1 TSL 5 BASIC21.45■■□□□ 1.02
CHMP6Q96FZ7 FIP1L1-201ENST00000306932 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC21.45■■□□□ 1.02
CHMP6Q96FZ7 PPP1R3F-203ENST00000466508 1885 ntTSL 2 BASIC21.45■■□□□ 1.02
CHMP6Q96FZ7 PGAM5-203ENST00000498926 2834 ntAPPRIS P1 TSL 2 BASIC21.45■■□□□ 1.02
CHMP6Q96FZ7 PTGER2-201ENST00000245457 2383 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
CHMP6Q96FZ7 LAMP5-AS1-201ENST00000443469 1928 ntTSL 2 BASIC21.45■■□□□ 1.02
CHMP6Q96FZ7 HSF4-225ENST00000584272 1549 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
CHMP6Q96FZ7 FBXL19-207ENST00000565690 2570 ntAPPRIS ALT2 TSL 5 BASIC21.44■■□□□ 1.02
CHMP6Q96FZ7 AF131216.4-201ENST00000638924 1588 ntBASIC21.44■■□□□ 1.02
CHMP6Q96FZ7 TPST1-201ENST00000304842 2116 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
CHMP6Q96FZ7 FGFR2-224ENST00000613048 4369 ntTSL 5 BASIC21.44■■□□□ 1.02
CHMP6Q96FZ7 MFSD14C-208ENST00000637864 1802 ntAPPRIS ALT2 TSL 2 BASIC21.44■■□□□ 1.02
CHMP6Q96FZ7 POMGNT2-202ENST00000441964 2531 ntAPPRIS P1 TSL 4 BASIC21.44■■□□□ 1.02
CHMP6Q96FZ7 MZT2B-201ENST00000281871 933 ntAPPRIS P3 TSL 1 (best) BASIC21.44■■□□□ 1.02
CHMP6Q96FZ7 MZT2A-201ENST00000309451 624 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
CHMP6Q96FZ7 AC009511.2-201ENST00000545904 679 ntTSL 2 BASIC21.44■■□□□ 1.02
CHMP6Q96FZ7 FAM173A-202ENST00000564000 1088 ntAPPRIS ALT2 TSL 2 BASIC21.44■■□□□ 1.02
CHMP6Q96FZ7 AC009086.3-201ENST00000623486 1008 ntBASIC21.44■■□□□ 1.02
CHMP6Q96FZ7 TMEM132A-202ENST00000453848 3346 ntAPPRIS ALT2 TSL 1 (best) BASIC21.44■■□□□ 1.02
CHMP6Q96FZ7 PHF11-202ENST00000378319 1359 ntAPPRIS P3 TSL 1 (best) BASIC21.44■■□□□ 1.02
CHMP6Q96FZ7 FP325331.1-202ENST00000623531 1380 ntBASIC21.44■■□□□ 1.02
CHMP6Q96FZ7 MARK2-204ENST00000402010 4728 ntAPPRIS ALT2 TSL 1 (best) BASIC21.44■■□□□ 1.02
CHMP6Q96FZ7 ALDH5A1-204ENST00000491546 1699 ntTSL 5 BASIC21.44■■□□□ 1.02
CHMP6Q96FZ7 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC21.44■■□□□ 1.02
CHMP6Q96FZ7 CREB3-201ENST00000353704 1832 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
CHMP6Q96FZ7 MOGS-201ENST00000233616 2895 ntAPPRIS P3 TSL 1 (best) BASIC21.43■■□□□ 1.02
CHMP6Q96FZ7 PCMT1-205ENST00000464889 1984 ntAPPRIS P3 TSL 1 (best) BASIC21.43■■□□□ 1.02
CHMP6Q96FZ7 MIR210HG-201ENST00000500447 1965 ntTSL 2 BASIC21.43■■□□□ 1.02
CHMP6Q96FZ7 FOXD4L3-201ENST00000342833 2039 ntAPPRIS P1 BASIC21.43■■□□□ 1.02
CHMP6Q96FZ7 RASGRP2-207ENST00000377497 2221 ntAPPRIS P2 TSL 1 (best) BASIC21.43■■□□□ 1.02
CHMP6Q96FZ7 IGFBP3-210ENST00000613132 2412 ntTSL 5 BASIC21.43■■□□□ 1.02
CHMP6Q96FZ7 MT2A-201ENST00000245185 786 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
CHMP6Q96FZ7 IGFBP6-201ENST00000301464 1169 ntAPPRIS P2 TSL 1 (best) BASIC21.43■■□□□ 1.02
CHMP6Q96FZ7 AC010913.1-201ENST00000608612 420 ntTSL 2 BASIC21.43■■□□□ 1.02
CHMP6Q96FZ7 FAM66B-202ENST00000606573 2630 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
CHMP6Q96FZ7 C1QTNF1-207ENST00000580454 1396 ntAPPRIS P1 TSL 5 BASIC21.43■■□□□ 1.02
Retrieved 100 of 98,524 protein–RNA pairs in 20.2 ms