Protein–RNA interactions for Protein: Q96FV0

LRRC46, Leucine-rich repeat-containing protein 46, humanhuman

Predictions only

Length 321 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC46Q96FV0 C7orf26-202ENST00000359073 1762 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
LRRC46Q96FV0 SARDH-203ENST00000371868 2266 ntTSL 2 BASIC19.18■□□□□ 0.66
LRRC46Q96FV0 ZBTB46-202ENST00000302995 2335 ntAPPRIS P1 TSL 2 BASIC19.18■□□□□ 0.66
LRRC46Q96FV0 PTP4A3-204ENST00000521578 1717 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
LRRC46Q96FV0 TESC-201ENST00000335209 1041 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
LRRC46Q96FV0 RAP1B-202ENST00000341355 714 ntAPPRIS P1 TSL 3 BASIC19.18■□□□□ 0.66
LRRC46Q96FV0 AC006015.1-201ENST00000429970 570 ntBASIC19.18■□□□□ 0.66
LRRC46Q96FV0 FAXDC2-211ENST00000520968 558 ntTSL 4 BASIC19.18■□□□□ 0.66
LRRC46Q96FV0 DBI-210ENST00000542275 757 ntTSL 5 BASIC19.18■□□□□ 0.66
LRRC46Q96FV0 AL355102.2-201ENST00000553811 600 ntAPPRIS P1 TSL 2 BASIC19.18■□□□□ 0.66
LRRC46Q96FV0 NIPSNAP1-201ENST00000216121 2237 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
LRRC46Q96FV0 AC096677.1-201ENST00000454651 1516 ntTSL 2 BASIC19.18■□□□□ 0.66
LRRC46Q96FV0 DAZAP1-205ENST00000587079 2086 ntAPPRIS ALT1 TSL 5 BASIC19.18■□□□□ 0.66
LRRC46Q96FV0 NCK2-201ENST00000233154 2683 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
LRRC46Q96FV0 PLEKHG4-201ENST00000360461 6782 ntAPPRIS P3 TSL 2 BASIC19.17■□□□□ 0.66
LRRC46Q96FV0 AL353803.4-201ENST00000565882 1934 ntBASIC19.17■□□□□ 0.66
LRRC46Q96FV0 AC138649.1-201ENST00000619611 1449 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
LRRC46Q96FV0 RNF39-201ENST00000244360 2206 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
LRRC46Q96FV0 STX4-201ENST00000313843 1481 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
LRRC46Q96FV0 AC009506.1-201ENST00000418474 1494 ntTSL 2 BASIC19.17■□□□□ 0.66
LRRC46Q96FV0 WDR86-201ENST00000334493 2023 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
LRRC46Q96FV0 NUDT14-202ENST00000392568 845 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
LRRC46Q96FV0 HSCB-202ENST00000398941 955 ntTSL 2 BASIC19.17■□□□□ 0.66
LRRC46Q96FV0 LTC4S-202ENST00000401985 486 ntTSL 3 BASIC19.17■□□□□ 0.66
LRRC46Q96FV0 AC079140.4-201ENST00000507448 529 ntBASIC19.17■□□□□ 0.66
LRRC46Q96FV0 PGF-203ENST00000553716 1699 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
LRRC46Q96FV0 ZFAND6-224ENST00000618205 1659 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
LRRC46Q96FV0 FAM120B-204ENST00000625626 1794 ntAPPRIS ALT2 TSL 2 BASIC19.16■□□□□ 0.66
LRRC46Q96FV0 TTC34-202ENST00000637179 1775 ntAPPRIS P2 TSL 5 BASIC19.16■□□□□ 0.66
LRRC46Q96FV0 TMCC2-209ENST00000637895 1455 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
LRRC46Q96FV0 CORO1A-201ENST00000219150 1803 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
LRRC46Q96FV0 EPCAM-202ENST00000405271 1530 ntTSL 5 BASIC19.16■□□□□ 0.66
LRRC46Q96FV0 UPF3A-201ENST00000351487 2235 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
LRRC46Q96FV0 SCLY-201ENST00000254663 2562 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
LRRC46Q96FV0 AP006621.1-202ENST00000528982 464 ntTSL 2 BASIC19.16■□□□□ 0.66
LRRC46Q96FV0 PLEKHJ1-206ENST00000587962 1311 ntTSL 2 BASIC19.16■□□□□ 0.66
LRRC46Q96FV0 RPS6-203ENST00000380384 1355 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
LRRC46Q96FV0 HACD3-205ENST00000562901 1797 ntTSL 5 BASIC19.16■□□□□ 0.66
LRRC46Q96FV0 NKX2-1-201ENST00000354822 2191 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
LRRC46Q96FV0 RASL12-202ENST00000421977 1523 ntTSL 2 BASIC19.15■□□□□ 0.66
LRRC46Q96FV0 AC007326.4-201ENST00000638240 1669 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
LRRC46Q96FV0 LGALS9C-201ENST00000328114 1730 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
LRRC46Q96FV0 C19orf24-201ENST00000409293 983 ntAPPRIS P1 TSL 2 BASIC19.15■□□□□ 0.66
LRRC46Q96FV0 LOXL1-AS1-208ENST00000565756 885 ntTSL 2 BASIC19.15■□□□□ 0.66
LRRC46Q96FV0 GNAO1-211ENST00000570235 568 ntTSL 2 BASIC19.15■□□□□ 0.66
LRRC46Q96FV0 SMUG1P1-201ENST00000590640 811 ntBASIC19.15■□□□□ 0.66
LRRC46Q96FV0 HAS1-203ENST00000594621 760 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
LRRC46Q96FV0 SLC35A2-211ENST00000634461 533 ntTSL 4 BASIC19.15■□□□□ 0.66
LRRC46Q96FV0 ARID1B-220ENST00000636930 8246 ntAPPRIS ALT2 TSL 2 BASIC19.15■□□□□ 0.66
LRRC46Q96FV0 AKT2-234ENST00000579047 2029 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
LRRC46Q96FV0 C7orf25-203ENST00000431882 1645 ntTSL 2 BASIC19.14■□□□□ 0.66
LRRC46Q96FV0 NR5A1-204ENST00000620110 2975 ntTSL 5 BASIC19.14■□□□□ 0.66
LRRC46Q96FV0 RBM26-207ENST00000622611 5230 ntTSL 2 BASIC19.14■□□□□ 0.65
LRRC46Q96FV0 KIAA0895-204ENST00000415803 2865 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
LRRC46Q96FV0 SNX18-201ENST00000326277 2063 ntTSL 2 BASIC19.14■□□□□ 0.65
LRRC46Q96FV0 STX7-201ENST00000367937 1090 ntTSL 5 BASIC19.14■□□□□ 0.65
LRRC46Q96FV0 C19orf12-205ENST00000392278 895 ntTSL 2 BASIC19.14■□□□□ 0.65
LRRC46Q96FV0 PGAP3-204ENST00000429199 970 ntTSL 2 BASIC19.14■□□□□ 0.65
LRRC46Q96FV0 SLC52A2-211ENST00000532887 2147 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.65
LRRC46Q96FV0 TK2-208ENST00000545043 1120 ntTSL 2 BASIC19.14■□□□□ 0.65
LRRC46Q96FV0 SLC25A29-212ENST00000555927 960 ntTSL 2 BASIC19.14■□□□□ 0.65
LRRC46Q96FV0 NDUFA6-AS1-207ENST00000595777 833 ntTSL 5 BASIC19.14■□□□□ 0.65
LRRC46Q96FV0 POU5F1-209ENST00000638788 369 ntTSL 5 BASIC19.14■□□□□ 0.65
LRRC46Q96FV0 SLC25A29-201ENST00000359232 2385 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
LRRC46Q96FV0 AP004607.4-201ENST00000530158 1459 ntBASIC19.14■□□□□ 0.65
LRRC46Q96FV0 MIS18A-201ENST00000290130 1575 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
LRRC46Q96FV0 D2HGDH-201ENST00000321264 2617 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
LRRC46Q96FV0 CCSAP-203ENST00000366687 5089 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
LRRC46Q96FV0 ZFYVE9-201ENST00000287727 5194 ntAPPRIS P4 TSL 5 BASIC19.14■□□□□ 0.65
LRRC46Q96FV0 ASPSCR1-208ENST00000580534 1776 ntTSL 2 BASIC19.14■□□□□ 0.65
LRRC46Q96FV0 ZFYVE28-202ENST00000503000 1874 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
LRRC46Q96FV0 UBE3C-209ENST00000611269 1866 ntTSL 2 BASIC19.14■□□□□ 0.65
LRRC46Q96FV0 REXO1-201ENST00000170168 4591 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
LRRC46Q96FV0 B4GAT1-201ENST00000311181 2072 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
LRRC46Q96FV0 SYT7-201ENST00000263846 4854 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
LRRC46Q96FV0 FMR1-201ENST00000218200 4333 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
LRRC46Q96FV0 AC026185.1-201ENST00000445748 174 ntBASIC19.13■□□□□ 0.65
LRRC46Q96FV0 SEC11A-208ENST00000559729 1256 ntTSL 2 BASIC19.13■□□□□ 0.65
LRRC46Q96FV0 ANAPC11-219ENST00000583839 499 ntAPPRIS P1 TSL 2 BASIC19.13■□□□□ 0.65
LRRC46Q96FV0 MDK-213ENST00000617138 635 ntTSL 2 BASIC19.13■□□□□ 0.65
LRRC46Q96FV0 CPT2-209ENST00000636935 803 ntTSL 5 BASIC19.13■□□□□ 0.65
LRRC46Q96FV0 ILKAP-211ENST00000612675 1335 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
LRRC46Q96FV0 CYHR1-201ENST00000306145 1409 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
LRRC46Q96FV0 USP45-205ENST00000472914 1617 ntTSL 5 BASIC19.13■□□□□ 0.65
LRRC46Q96FV0 JAGN1-201ENST00000307768 1693 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
LRRC46Q96FV0 SMUG1-215ENST00000508394 1697 ntAPPRIS P1 TSL 2 BASIC19.13■□□□□ 0.65
LRRC46Q96FV0 KLF9-201ENST00000377126 5175 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
LRRC46Q96FV0 LRIG1-201ENST00000273261 5273 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
LRRC46Q96FV0 WAS-201ENST00000376701 1849 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
LRRC46Q96FV0 ZC3H14-219ENST00000556945 2075 ntTSL 5 BASIC19.13■□□□□ 0.65
LRRC46Q96FV0 ZNF843-201ENST00000315678 2137 ntAPPRIS P2 TSL 2 BASIC19.13■□□□□ 0.65
LRRC46Q96FV0 RARA-201ENST00000254066 2414 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
LRRC46Q96FV0 CACNA1A-218ENST00000635895 8657 ntAPPRIS ALT2 TSL 5 BASIC19.13■□□□□ 0.65
LRRC46Q96FV0 CACNA1A-257ENST00000638009 8665 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
LRRC46Q96FV0 FAM72A-202ENST00000367128 2398 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
LRRC46Q96FV0 FAM72D-201ENST00000400889 2397 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
LRRC46Q96FV0 OLIG1-201ENST00000382348 2277 ntAPPRIS P1 BASIC19.12■□□□□ 0.65
LRRC46Q96FV0 ARG2-201ENST00000261783 2045 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
LRRC46Q96FV0 ACSF2-207ENST00000504392 1881 ntTSL 2 BASIC19.12■□□□□ 0.65
LRRC46Q96FV0 DXO-201ENST00000337523 1628 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 13.7 ms