Protein–RNA interactions for Protein: Q96CG8

CTHRC1, Collagen triple helix repeat-containing protein 1, humanhuman

Predictions only

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTHRC1Q96CG8 ZNF843-201ENST00000315678 2137 ntAPPRIS P2 TSL 2 BASIC19.94■□□□□ 0.78
CTHRC1Q96CG8 C16orf59-201ENST00000361837 1662 ntAPPRIS P2 TSL 1 (best) BASIC19.94■□□□□ 0.78
CTHRC1Q96CG8 NDUFB2-212ENST00000476279 1666 ntAPPRIS P1 TSL 5 BASIC19.94■□□□□ 0.78
CTHRC1Q96CG8 BID-212ENST00000614949 1988 ntTSL 5 BASIC19.94■□□□□ 0.78
CTHRC1Q96CG8 AC003102.1-202ENST00000563394 1796 ntBASIC19.93■□□□□ 0.78
CTHRC1Q96CG8 MEF2A-207ENST00000558812 2186 ntTSL 2 BASIC19.93■□□□□ 0.78
CTHRC1Q96CG8 RPL8-201ENST00000262584 1041 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
CTHRC1Q96CG8 CCDC28B-201ENST00000373602 1089 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
CTHRC1Q96CG8 MOSPD3-202ENST00000379527 1016 ntAPPRIS P1 TSL 5 BASIC19.93■□□□□ 0.78
CTHRC1Q96CG8 NT5C3AP1-201ENST00000394500 1012 ntBASIC19.93■□□□□ 0.78
CTHRC1Q96CG8 TRAPPC6A-205ENST00000592647 514 ntTSL 2 BASIC19.93■□□□□ 0.78
CTHRC1Q96CG8 ELOA3B-201ENST00000611323 1641 ntAPPRIS P1 BASIC19.93■□□□□ 0.78
CTHRC1Q96CG8 ELOA3D-201ENST00000620881 1641 ntAPPRIS P1 BASIC19.93■□□□□ 0.78
CTHRC1Q96CG8 TMEM9B-201ENST00000309134 1659 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
CTHRC1Q96CG8 NFIX-203ENST00000397661 3143 ntTSL 5 BASIC19.93■□□□□ 0.78
CTHRC1Q96CG8 RFLNA-201ENST00000324038 2148 ntAPPRIS P2 TSL 2 BASIC19.93■□□□□ 0.78
CTHRC1Q96CG8 LINC00969-219ENST00000453324 1439 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
CTHRC1Q96CG8 NFKBIL1-203ENST00000376148 1478 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
CTHRC1Q96CG8 ZDHHC7-203ENST00000564466 1488 ntTSL 5 BASIC19.92■□□□□ 0.78
CTHRC1Q96CG8 DTNBP1-201ENST00000338950 1880 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
CTHRC1Q96CG8 SPRTN-201ENST00000008440 1667 ntTSL 2 BASIC19.92■□□□□ 0.78
CTHRC1Q96CG8 P2RX2-202ENST00000348800 1222 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
CTHRC1Q96CG8 P2RX2-204ENST00000351222 1140 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
CTHRC1Q96CG8 NMRAL1-202ENST00000404295 1233 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
CTHRC1Q96CG8 RPUSD3-206ENST00000433535 1178 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
CTHRC1Q96CG8 ANKRD63-201ENST00000434396 1143 ntAPPRIS P1 BASIC19.92■□□□□ 0.78
CTHRC1Q96CG8 P2RX2-207ENST00000449132 1113 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
CTHRC1Q96CG8 LRP5L-203ENST00000444995 1714 ntAPPRIS ALT2 TSL 5 BASIC19.92■□□□□ 0.78
CTHRC1Q96CG8 NABP2-203ENST00000380198 1775 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
CTHRC1Q96CG8 RAB24-202ENST00000303270 1385 ntTSL 2 BASIC19.92■□□□□ 0.78
CTHRC1Q96CG8 GTPBP6-201ENST00000326153 1907 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
CTHRC1Q96CG8 PIAS2-203ENST00000545673 1590 ntTSL 2 BASIC19.91■□□□□ 0.78
CTHRC1Q96CG8 LIMS2-201ENST00000324938 2111 ntAPPRIS P3 TSL 1 (best) BASIC19.91■□□□□ 0.78
CTHRC1Q96CG8 ZSCAN18-217ENST00000601144 2190 ntAPPRIS P3 TSL 1 (best) BASIC19.91■□□□□ 0.78
CTHRC1Q96CG8 FBXW4P1-201ENST00000426721 2239 ntBASIC19.91■□□□□ 0.78
CTHRC1Q96CG8 AC113189.4-201ENST00000575331 5553 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
CTHRC1Q96CG8 GGA2-211ENST00000567468 1713 ntTSL 2 BASIC19.91■□□□□ 0.78
CTHRC1Q96CG8 ST3GAL4-201ENST00000227495 1790 ntAPPRIS P3 TSL 5 BASIC19.91■□□□□ 0.78
CTHRC1Q96CG8 MEIS3-202ENST00000441740 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
CTHRC1Q96CG8 DENND1A-201ENST00000373618 3003 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
CTHRC1Q96CG8 GJB6-203ENST00000400065 1805 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
CTHRC1Q96CG8 AC092675.2-201ENST00000413274 541 ntTSL 4 BASIC19.91■□□□□ 0.78
CTHRC1Q96CG8 AC127029.2-201ENST00000577329 502 ntTSL 3 BASIC19.91■□□□□ 0.78
CTHRC1Q96CG8 CACYBP-201ENST00000367679 2766 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
CTHRC1Q96CG8 ME2-206ENST00000638410 2289 ntTSL 5 BASIC19.91■□□□□ 0.78
CTHRC1Q96CG8 ME2-210ENST00000639255 2262 ntTSL 5 BASIC19.91■□□□□ 0.78
CTHRC1Q96CG8 HLA-DPB1-211ENST00000418931 1560 ntAPPRIS P2 BASIC19.91■□□□□ 0.78
CTHRC1Q96CG8 B4GALNT1-203ENST00000449184 1633 ntTSL 2 BASIC19.91■□□□□ 0.78
CTHRC1Q96CG8 LINC00472-204ENST00000436803 667 ntTSL 5 BASIC19.9■□□□□ 0.78
CTHRC1Q96CG8 CALM1-202ENST00000447653 1104 ntAPPRIS ALT1 TSL 2 BASIC19.9■□□□□ 0.78
CTHRC1Q96CG8 CPT2-209ENST00000636935 803 ntTSL 5 BASIC19.9■□□□□ 0.78
CTHRC1Q96CG8 TMEM200B-201ENST00000420504 2553 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CTHRC1Q96CG8 AC135048.1-201ENST00000566056 1318 ntTSL 2 BASIC19.9■□□□□ 0.78
CTHRC1Q96CG8 PRKACA-201ENST00000308677 2677 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CTHRC1Q96CG8 GPR35-204ENST00000430267 1399 ntAPPRIS ALT2 TSL 5 BASIC19.9■□□□□ 0.78
CTHRC1Q96CG8 NOXA1-202ENST00000392815 1464 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
CTHRC1Q96CG8 HMCES-203ENST00000417226 1490 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
CTHRC1Q96CG8 MESP1-201ENST00000300057 2369 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CTHRC1Q96CG8 GUSB-201ENST00000304895 2300 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
CTHRC1Q96CG8 PHACTR3-202ENST00000359926 2252 ntTSL 2 BASIC19.89■□□□□ 0.77
CTHRC1Q96CG8 CCDC160-201ENST00000370809 1299 ntAPPRIS P1 TSL 5 BASIC19.89■□□□□ 0.77
CTHRC1Q96CG8 RBPJL-202ENST00000372741 1636 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
CTHRC1Q96CG8 CBWD3-202ENST00000377342 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
CTHRC1Q96CG8 FBXW11-203ENST00000393802 2181 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
CTHRC1Q96CG8 RASGRP2-210ENST00000394430 2174 ntTSL 2 BASIC19.89■□□□□ 0.77
CTHRC1Q96CG8 CDKN2AIPNL-201ENST00000395009 800 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
CTHRC1Q96CG8 GCH1-202ENST00000395514 1977 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
CTHRC1Q96CG8 RORB-AS1-201ENST00000417576 1178 ntTSL 5 BASIC19.89■□□□□ 0.77
CTHRC1Q96CG8 ADORA2A-AS1-203ENST00000427813 2027 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
CTHRC1Q96CG8 CDKN1C-204ENST00000440480 1811 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
CTHRC1Q96CG8 WDR86-203ENST00000469830 1691 ntTSL 2 BASIC19.89■□□□□ 0.77
CTHRC1Q96CG8 UBTF-213ENST00000533177 3011 ntTSL 5 BASIC19.89■□□□□ 0.77
CTHRC1Q96CG8 POC1B-209ENST00000549035 2038 ntTSL 2 BASIC19.89■□□□□ 0.77
CTHRC1Q96CG8 AC079328.2-202ENST00000560903 1410 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
CTHRC1Q96CG8 SLC29A1-207ENST00000393841 2485 ntAPPRIS P1 TSL 2 BASIC19.88■□□□□ 0.77
CTHRC1Q96CG8 DES-201ENST00000373960 2248 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CTHRC1Q96CG8 WWC2-AS2-201ENST00000578387 2183 ntBASIC19.88■□□□□ 0.77
CTHRC1Q96CG8 P2RY2-203ENST00000393597 2107 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CTHRC1Q96CG8 KRT18P55-201ENST00000577198 1950 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
CTHRC1Q96CG8 POTEC-204ENST00000620346 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
CTHRC1Q96CG8 VPS9D1-AS1-202ENST00000562866 1753 ntTSL 2 BASIC19.88■□□□□ 0.77
CTHRC1Q96CG8 MAGI2-208ENST00000522391 4878 ntAPPRIS ALT2 TSL 5 BASIC19.88■□□□□ 0.77
CTHRC1Q96CG8 RASL12-202ENST00000421977 1523 ntTSL 2 BASIC19.88■□□□□ 0.77
CTHRC1Q96CG8 SMPD5-201ENST00000528912 1390 ntTSL 5 BASIC19.88■□□□□ 0.77
CTHRC1Q96CG8 AC123595.1-201ENST00000440769 1046 ntBASIC19.88■□□□□ 0.77
CTHRC1Q96CG8 PPM1N-207ENST00000451287 1293 ntAPPRIS P1 TSL 5 BASIC19.88■□□□□ 0.77
CTHRC1Q96CG8 RNF114-202ENST00000622920 1284 ntTSL 5 BASIC19.88■□□□□ 0.77
CTHRC1Q96CG8 SH2B2-202ENST00000536178 2113 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CTHRC1Q96CG8 NEU4-204ENST00000405370 1907 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CTHRC1Q96CG8 PROSER2-205ENST00000622831 1646 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
CTHRC1Q96CG8 DTNB-207ENST00000405222 2273 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
CTHRC1Q96CG8 ASRGL1-201ENST00000301776 2182 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CTHRC1Q96CG8 RASD1-202ENST00000579152 1404 ntTSL 2 BASIC19.87■□□□□ 0.77
CTHRC1Q96CG8 TPST1-201ENST00000304842 2116 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CTHRC1Q96CG8 ACBD4-216ENST00000619916 1276 ntTSL 5 BASIC19.87■□□□□ 0.77
CTHRC1Q96CG8 AC244015.2-201ENST00000616358 1861 ntBASIC19.87■□□□□ 0.77
CTHRC1Q96CG8 MGAT4D-208ENST00000515354 1806 ntTSL 3 BASIC19.87■□□□□ 0.77
CTHRC1Q96CG8 SOX17-201ENST00000297316 2342 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CTHRC1Q96CG8 SCRN2-212ENST00000584123 1745 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
CTHRC1Q96CG8 IFNGR2-203ENST00000405436 1684 ntTSL 5 BASIC19.87■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 20.4 ms