Protein–RNA interactions for Protein: Q93008

USP9X, Probable ubiquitin carboxyl-terminal hydrolase FAF-X, humanhuman

Predicted RBP Predictions only

Length 2,570 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP9XQ93008 PRMT1-221ENST00000610806 1192 ntTSL 3 BASIC18.9■□□□□ 0.62
USP9XQ93008 SLC35A2-213ENST00000635015 1008 ntTSL 2 BASIC18.9■□□□□ 0.62
USP9XQ93008 CASP16P-201ENST00000428155 1433 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
USP9XQ93008 HSF1-204ENST00000528838 2142 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
USP9XQ93008 CASP9-203ENST00000375890 1351 ntTSL 2 BASIC18.9■□□□□ 0.62
USP9XQ93008 LIMD2-205ENST00000578402 1534 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
USP9XQ93008 AC079630.1-202ENST00000618127 1840 ntBASIC18.9■□□□□ 0.62
USP9XQ93008 C10orf91-201ENST00000321248 1257 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
USP9XQ93008 TRAPPC3-204ENST00000373166 1265 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
USP9XQ93008 RCN1P1-201ENST00000400413 996 ntBASIC18.9■□□□□ 0.62
USP9XQ93008 COL19A1-203ENST00000478620 589 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
USP9XQ93008 AC008403.3-201ENST00000598924 454 ntBASIC18.9■□□□□ 0.62
USP9XQ93008 HAS2-AS1-201ENST00000514180 1656 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
USP9XQ93008 GNPTG-201ENST00000204679 1983 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
USP9XQ93008 DKK3-203ENST00000525493 1326 ntTSL 2 BASIC18.9■□□□□ 0.62
USP9XQ93008 SMOX-201ENST00000278795 2164 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
USP9XQ93008 CCS-208ENST00000533244 1430 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
USP9XQ93008 LINC00471-201ENST00000313064 1282 ntTSL 1 (best) BASIC18.89■□□□□ 0.62
USP9XQ93008 DGCR6-201ENST00000331444 1214 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
USP9XQ93008 HBM-201ENST00000356815 506 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
USP9XQ93008 CLN6-206ENST00000565471 1075 ntTSL 2 BASIC18.89■□□□□ 0.62
USP9XQ93008 PKDCC-201ENST00000294964 2502 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
USP9XQ93008 PDIA6-201ENST00000272227 2338 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.62
USP9XQ93008 NOC4L-201ENST00000330579 1632 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
USP9XQ93008 DHRS11-210ENST00000611337 1341 ntTSL 5 BASIC18.89■□□□□ 0.61
USP9XQ93008 ZNF692-201ENST00000306601 1931 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.61
USP9XQ93008 ZNF444-211ENST00000592949 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
USP9XQ93008 DNAJA4-210ENST00000489435 947 ntTSL 3 BASIC18.89■□□□□ 0.61
USP9XQ93008 RPPH1-201ENST00000516869 333 ntBASIC18.89■□□□□ 0.61
USP9XQ93008 FFAR3-202ENST00000594310 1182 ntAPPRIS P1 BASIC18.89■□□□□ 0.61
USP9XQ93008 AC069236.1-201ENST00000604339 616 ntBASIC18.89■□□□□ 0.61
USP9XQ93008 AL024498.1-202ENST00000606652 480 ntTSL 2 BASIC18.89■□□□□ 0.61
USP9XQ93008 AC097493.4-201ENST00000641197 219 ntBASIC18.89■□□□□ 0.61
USP9XQ93008 PCOLCE2-201ENST00000295992 2021 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
USP9XQ93008 KLC1-225ENST00000557575 2188 ntTSL 5 BASIC18.89■□□□□ 0.61
USP9XQ93008 SP5-201ENST00000375281 2033 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
USP9XQ93008 ASB18-201ENST00000409749 1401 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
USP9XQ93008 CXCL3-201ENST00000296026 1075 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
USP9XQ93008 RGCC-201ENST00000379359 960 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
USP9XQ93008 FLYWCH2-202ENST00000396958 1036 ntAPPRIS P2 TSL 1 (best) BASIC18.88■□□□□ 0.61
USP9XQ93008 ART5-202ENST00000397067 1154 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
USP9XQ93008 AC006252.1-201ENST00000483834 1101 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
USP9XQ93008 SPI1-204ENST00000533968 1290 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
USP9XQ93008 CDKN2A-213ENST00000579122 666 ntTSL 3 BASIC18.88■□□□□ 0.61
USP9XQ93008 REXO1L12P-201ENST00000622156 912 ntBASIC18.88■□□□□ 0.61
USP9XQ93008 MAPK9-206ENST00000425491 2266 ntTSL 5 BASIC18.88■□□□□ 0.61
USP9XQ93008 HSD11B1L-201ENST00000301382 1457 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
USP9XQ93008 CBARP-202ENST00000382477 2453 ntAPPRIS ALT2 TSL 5 BASIC18.88■□□□□ 0.61
USP9XQ93008 ZNF837-201ENST00000427624 2038 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
USP9XQ93008 AC010980.2-201ENST00000587099 1412 ntBASIC18.88■□□□□ 0.61
USP9XQ93008 FHL3-201ENST00000373016 1647 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
USP9XQ93008 AC009052.1-201ENST00000567090 298 ntTSL 3 BASIC18.88■□□□□ 0.61
USP9XQ93008 SPINT2-202ENST00000454580 1367 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
USP9XQ93008 CBLC-201ENST00000270279 1579 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
USP9XQ93008 CNTD2-202ENST00000430325 1817 ntAPPRIS P2 TSL 2 BASIC18.88■□□□□ 0.61
USP9XQ93008 SLC25A24P1-201ENST00000411846 1569 ntTSL 5 BASIC18.88■□□□□ 0.61
USP9XQ93008 AL357874.1-201ENST00000428948 574 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
USP9XQ93008 JPT2-204ENST00000561516 1065 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
USP9XQ93008 PTGIR-205ENST00000597185 775 ntTSL 3 BASIC18.88■□□□□ 0.61
USP9XQ93008 LINC00543-201ENST00000567234 1845 ntBASIC18.87■□□□□ 0.61
USP9XQ93008 BLOC1S4-201ENST00000320776 1617 ntAPPRIS P1 BASIC18.87■□□□□ 0.61
USP9XQ93008 OGG1-209ENST00000383826 1069 ntTSL 5 BASIC18.87■□□□□ 0.61
USP9XQ93008 GATS-209ENST00000454084 1030 ntTSL 3 BASIC18.87■□□□□ 0.61
USP9XQ93008 BEAN1-AS1-201ENST00000564618 533 ntTSL 4 BASIC18.87■□□□□ 0.61
USP9XQ93008 YPEL3-207ENST00000566134 761 ntTSL 5 BASIC18.87■□□□□ 0.61
USP9XQ93008 ASCC1-204ENST00000394915 1510 ntTSL 5 BASIC18.87■□□□□ 0.61
USP9XQ93008 MYCL-201ENST00000372815 1944 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
USP9XQ93008 PIAS2-203ENST00000545673 1590 ntTSL 2 BASIC18.87■□□□□ 0.61
USP9XQ93008 ZDHHC12-202ENST00000372667 1187 ntTSL 5 BASIC18.87■□□□□ 0.61
USP9XQ93008 ANKRD39-201ENST00000393537 976 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
USP9XQ93008 TNIK-208ENST00000465393 750 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
USP9XQ93008 TRAPPC6A-201ENST00000006275 805 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
USP9XQ93008 AC013268.1-201ENST00000639717 1208 ntTSL 5 BASIC18.87■□□□□ 0.61
USP9XQ93008 FAM86JP-203ENST00000485843 2012 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
USP9XQ93008 FAM136A-201ENST00000037869 1810 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
USP9XQ93008 AP003068.2-202ENST00000526623 1662 ntTSL 2 BASIC18.86■□□□□ 0.61
USP9XQ93008 NENF-201ENST00000366988 949 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
USP9XQ93008 CD58-201ENST00000369487 892 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
USP9XQ93008 CD58-202ENST00000369489 1098 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
USP9XQ93008 ZPBP-201ENST00000046087 1213 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
USP9XQ93008 FAM181A-203ENST00000556222 1162 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
USP9XQ93008 MSANTD3-207ENST00000622639 1748 ntAPPRIS P1 TSL 3 BASIC18.86■□□□□ 0.61
USP9XQ93008 PLPPR3-204ENST00000520876 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
USP9XQ93008 POU2F3-206ENST00000543440 1953 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
USP9XQ93008 FBL-201ENST00000221801 1160 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
USP9XQ93008 SCO2-201ENST00000252785 992 ntAPPRIS P1 TSL 2 BASIC18.86■□□□□ 0.61
USP9XQ93008 ASMTL-AS1-203ENST00000425740 840 ntTSL 2 BASIC18.86■□□□□ 0.61
USP9XQ93008 GLYCTK-205ENST00000473032 935 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
USP9XQ93008 DOK3-205ENST00000501403 1872 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
USP9XQ93008 IMPA2-208ENST00000589238 923 ntTSL 3 BASIC18.86■□□□□ 0.61
USP9XQ93008 RING1-201ENST00000374656 1752 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
USP9XQ93008 SMUG1-202ENST00000337581 1571 ntAPPRIS P1 TSL 2 BASIC18.85■□□□□ 0.61
USP9XQ93008 AMZ2P1-201ENST00000397713 2259 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
USP9XQ93008 SLX1A-201ENST00000251303 1091 ntAPPRIS P4 TSL 1 (best) BASIC18.85■□□□□ 0.61
USP9XQ93008 SLX1B-201ENST00000330181 1165 ntAPPRIS P4 TSL 1 (best) BASIC18.85■□□□□ 0.61
USP9XQ93008 TSPAN14-205ENST00000372158 1095 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
USP9XQ93008 SELENOF-203ENST00000401030 727 ntTSL 2 BASIC18.85■□□□□ 0.61
USP9XQ93008 AC008105.2-201ENST00000420431 579 ntTSL 4 BASIC18.85■□□□□ 0.61
USP9XQ93008 A3GALT2-201ENST00000442999 1023 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
USP9XQ93008 JOSD2-205ENST00000601423 802 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 15.9 ms