Protein–RNA interactions for Protein: Q8WWV3

RTN4IP1, Reticulon-4-interacting protein 1, mitochondrial, humanhuman

Predicted RBP Predictions only

Length 396 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4IP1Q8WWV3 DCK-201ENST00000286648 2716 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
RTN4IP1Q8WWV3 ZNF48-201ENST00000320159 3234 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
RTN4IP1Q8WWV3 TMEFF1-201ENST00000374879 2611 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
RTN4IP1Q8WWV3 AC131281.2-201ENST00000520478 145 ntBASIC17.95■□□□□ 0.46
RTN4IP1Q8WWV3 LRRK1-208ENST00000532029 1241 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
RTN4IP1Q8WWV3 TMC6-218ENST00000591436 1155 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
RTN4IP1Q8WWV3 AC131212.1-201ENST00000613771 668 ntBASIC17.95■□□□□ 0.46
RTN4IP1Q8WWV3 SLC35A3-216ENST00000639221 1032 ntTSL 5 BASIC17.95■□□□□ 0.46
RTN4IP1Q8WWV3 ZNF37BP-201ENST00000435805 1695 ntTSL 5 BASIC17.95■□□□□ 0.46
RTN4IP1Q8WWV3 MEF2A-202ENST00000354410 5824 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
RTN4IP1Q8WWV3 MPZL1-201ENST00000359523 5010 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
RTN4IP1Q8WWV3 DOK3-202ENST00000357198 1729 ntTSL 2 BASIC17.95■□□□□ 0.46
RTN4IP1Q8WWV3 LAYN-209ENST00000533265 1703 ntTSL 5 BASIC17.95■□□□□ 0.46
RTN4IP1Q8WWV3 Z98882.1-201ENST00000622160 2253 ntBASIC17.95■□□□□ 0.46
RTN4IP1Q8WWV3 AC073130.3-201ENST00000624389 2278 ntBASIC17.95■□□□□ 0.46
RTN4IP1Q8WWV3 FAM47E-201ENST00000424749 1484 ntAPPRIS P3 TSL 5 BASIC17.95■□□□□ 0.46
RTN4IP1Q8WWV3 ECE2-203ENST00000359140 3147 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
RTN4IP1Q8WWV3 IL15RA-206ENST00000397248 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
RTN4IP1Q8WWV3 TUB-203ENST00000534099 1759 ntTSL 2 BASIC17.94■□□□□ 0.46
RTN4IP1Q8WWV3 PYCARD-201ENST00000247470 990 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
RTN4IP1Q8WWV3 SSR2-210ENST00000480567 895 ntAPPRIS P1 TSL 2 BASIC17.94■□□□□ 0.46
RTN4IP1Q8WWV3 SMARCA5-AS1-201ENST00000500800 945 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
RTN4IP1Q8WWV3 ZNF419-210ENST00000520540 568 ntTSL 4 BASIC17.94■□□□□ 0.46
RTN4IP1Q8WWV3 OIP5-AS1-208ENST00000560706 473 ntTSL 5 BASIC17.94■□□□□ 0.46
RTN4IP1Q8WWV3 MIR4466-201ENST00000606121 54 ntBASIC17.94■□□□□ 0.46
RTN4IP1Q8WWV3 AC092171.4-201ENST00000609130 632 ntBASIC17.94■□□□□ 0.46
RTN4IP1Q8WWV3 LY6H-205ENST00000615409 980 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
RTN4IP1Q8WWV3 SUMF1-202ENST00000383843 1447 ntTSL 2 BASIC17.94■□□□□ 0.46
RTN4IP1Q8WWV3 HSPBP1-206ENST00000587922 1449 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
RTN4IP1Q8WWV3 DPP7-201ENST00000371579 1590 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
RTN4IP1Q8WWV3 SIRT7-201ENST00000328666 1743 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
RTN4IP1Q8WWV3 CECR2-202ENST00000342247 6178 ntAPPRIS ALT2 TSL 5 BASIC17.94■□□□□ 0.46
RTN4IP1Q8WWV3 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
RTN4IP1Q8WWV3 LEFTY1-201ENST00000272134 1626 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
RTN4IP1Q8WWV3 ME2-206ENST00000638410 2289 ntTSL 5 BASIC17.93■□□□□ 0.46
RTN4IP1Q8WWV3 ME2-210ENST00000639255 2262 ntTSL 5 BASIC17.93■□□□□ 0.46
RTN4IP1Q8WWV3 H1FX-201ENST00000333762 1507 ntAPPRIS P1 BASIC17.93■□□□□ 0.46
RTN4IP1Q8WWV3 ECHDC1-203ENST00000368291 1354 ntTSL 2 BASIC17.93■□□□□ 0.46
RTN4IP1Q8WWV3 AOC1-202ENST00000416793 2453 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
RTN4IP1Q8WWV3 PILRB-207ENST00000448382 2314 ntTSL 2 BASIC17.93■□□□□ 0.46
RTN4IP1Q8WWV3 HTRA3-202ENST00000382512 2023 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
RTN4IP1Q8WWV3 ZNF446-208ENST00000622313 1884 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
RTN4IP1Q8WWV3 AC006455.2-201ENST00000429931 906 ntBASIC17.93■□□□□ 0.46
RTN4IP1Q8WWV3 DPP10-AS1-201ENST00000432658 730 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
RTN4IP1Q8WWV3 AL499627.2-201ENST00000606283 725 ntBASIC17.93■□□□□ 0.46
RTN4IP1Q8WWV3 CFAP99-206ENST00000616117 1941 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
RTN4IP1Q8WWV3 CHN1-203ENST00000409156 1761 ntTSL 2 BASIC17.93■□□□□ 0.46
RTN4IP1Q8WWV3 AC090377.1-201ENST00000585691 1762 ntTSL 3 BASIC17.93■□□□□ 0.46
RTN4IP1Q8WWV3 AC004687.1-201ENST00000579003 1625 ntBASIC17.93■□□□□ 0.46
RTN4IP1Q8WWV3 ESR2-204ENST00000353772 2454 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
RTN4IP1Q8WWV3 CCDC88B-203ENST00000359902 2326 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
RTN4IP1Q8WWV3 HAGHL-212ENST00000564537 1667 ntTSL 2 BASIC17.93■□□□□ 0.46
RTN4IP1Q8WWV3 DBP-201ENST00000222122 2229 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
RTN4IP1Q8WWV3 CENPB-201ENST00000379751 2840 ntAPPRIS P1 BASIC17.92■□□□□ 0.46
RTN4IP1Q8WWV3 POTEC-204ENST00000620346 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
RTN4IP1Q8WWV3 AC073934.1-201ENST00000490314 495 ntTSL 4 BASIC17.92■□□□□ 0.46
RTN4IP1Q8WWV3 ARFIP2-205ENST00000525235 852 ntTSL 2 BASIC17.92■□□□□ 0.46
RTN4IP1Q8WWV3 HOXA11-AS1_1.1-201ENST00000613939 98 ntBASIC17.92■□□□□ 0.46
RTN4IP1Q8WWV3 GRAMD1B-217ENST00000640939 1212 ntTSL 5 BASIC17.92■□□□□ 0.46
RTN4IP1Q8WWV3 RAP1B-204ENST00000393436 2049 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
RTN4IP1Q8WWV3 NUDT18-201ENST00000611621 1497 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
RTN4IP1Q8WWV3 IGFBP1-201ENST00000275525 1653 ntAPPRIS P2 TSL 1 (best) BASIC17.92■□□□□ 0.46
RTN4IP1Q8WWV3 ZNF497-202ENST00000425453 2261 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
RTN4IP1Q8WWV3 GTSE1-AS1-202ENST00000623117 1518 ntBASIC17.92■□□□□ 0.46
RTN4IP1Q8WWV3 MAP7-206ENST00000611373 2317 ntAPPRIS ALT2 TSL 5 BASIC17.92■□□□□ 0.46
RTN4IP1Q8WWV3 ZNF688-201ENST00000223459 2506 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
RTN4IP1Q8WWV3 AQP6-201ENST00000315520 1398 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
RTN4IP1Q8WWV3 HIC1-207ENST00000619757 6711 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
RTN4IP1Q8WWV3 CNTD2-202ENST00000430325 1817 ntAPPRIS P2 TSL 2 BASIC17.91■□□□□ 0.46
RTN4IP1Q8WWV3 LINC00094-201ENST00000432807 2300 ntAPPRIS ALT2 TSL 2 BASIC17.91■□□□□ 0.46
RTN4IP1Q8WWV3 TMEM165-204ENST00000506198 828 ntTSL 2 BASIC17.91■□□□□ 0.46
RTN4IP1Q8WWV3 SENCR-201ENST00000526269 1298 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
RTN4IP1Q8WWV3 CCER2-201ENST00000571838 1057 ntAPPRIS P2 TSL 5 BASIC17.91■□□□□ 0.46
RTN4IP1Q8WWV3 ARHGDIA-217ENST00000584461 886 ntTSL 2 BASIC17.91■□□□□ 0.46
RTN4IP1Q8WWV3 OSR1-201ENST00000272223 1936 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
RTN4IP1Q8WWV3 UBE2K-201ENST00000261427 5245 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
RTN4IP1Q8WWV3 PMPCA-203ENST00000399219 1987 ntTSL 2 BASIC17.91■□□□□ 0.46
RTN4IP1Q8WWV3 DUSP9-202ENST00000370167 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
RTN4IP1Q8WWV3 TSPAN3-202ENST00000346495 1647 ntTSL 2 BASIC17.9■□□□□ 0.46
RTN4IP1Q8WWV3 PLD6-201ENST00000321560 2560 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
RTN4IP1Q8WWV3 THOC6-202ENST00000326266 1419 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
RTN4IP1Q8WWV3 C1orf174-201ENST00000361605 1666 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
RTN4IP1Q8WWV3 B3GALT4-204ENST00000451237 1694 ntAPPRIS P1 BASIC17.9■□□□□ 0.46
RTN4IP1Q8WWV3 HOXA4-201ENST00000360046 1747 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
RTN4IP1Q8WWV3 SOHLH1-201ENST00000298466 1987 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
RTN4IP1Q8WWV3 DNAAF4-201ENST00000321149 1993 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
RTN4IP1Q8WWV3 CLTB-201ENST00000310418 1215 ntAPPRIS P4 TSL 1 (best) BASIC17.9■□□□□ 0.46
RTN4IP1Q8WWV3 CLTB-202ENST00000345807 1161 ntAPPRIS ALT1 TSL 1 (best) BASIC17.9■□□□□ 0.46
RTN4IP1Q8WWV3 ACYP2-202ENST00000394666 993 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
RTN4IP1Q8WWV3 MAST4-206ENST00000406374 1066 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
RTN4IP1Q8WWV3 AL122058.1-201ENST00000412321 1166 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
RTN4IP1Q8WWV3 AL445237.1-202ENST00000604581 425 ntTSL 5 BASIC17.9■□□□□ 0.46
RTN4IP1Q8WWV3 pRNA.6-201ENST00000610482 90 ntBASIC17.9■□□□□ 0.46
RTN4IP1Q8WWV3 pRNA.5-201ENST00000612139 90 ntBASIC17.9■□□□□ 0.46
RTN4IP1Q8WWV3 pRNA.11-201ENST00000618423 90 ntBASIC17.9■□□□□ 0.46
RTN4IP1Q8WWV3 pRNA.13-201ENST00000619112 90 ntBASIC17.9■□□□□ 0.46
RTN4IP1Q8WWV3 SHISA9-205ENST00000639941 1135 ntAPPRIS ALT2 TSL 5 BASIC17.9■□□□□ 0.46
RTN4IP1Q8WWV3 SDC3-202ENST00000339394 1580 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
RTN4IP1Q8WWV3 ARHGEF4-202ENST00000355771 1872 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
RTN4IP1Q8WWV3 ZNF510-203ENST00000375231 5616 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 34.3 ms