Protein–RNA interactions for Protein: Q8WWA1

TMEM40, Transmembrane protein 40, humanhuman

Predictions only

Length 233 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM40Q8WWA1 NEU4-204ENST00000405370 1907 ntAPPRIS P1 TSL 1 (best) BASIC23.43■■□□□ 1.34
TMEM40Q8WWA1 VPS29-206ENST00000549578 1523 ntAPPRIS P1 TSL 1 (best) BASIC23.43■■□□□ 1.34
TMEM40Q8WWA1 KREMEN2-203ENST00000571007 1877 ntTSL 2 BASIC23.43■■□□□ 1.34
TMEM40Q8WWA1 C10orf95-201ENST00000625129 1469 ntAPPRIS P1 TSL 1 (best) BASIC23.43■■□□□ 1.34
TMEM40Q8WWA1 SOCS7-202ENST00000613678 1827 ntTSL 5 BASIC23.43■■□□□ 1.34
TMEM40Q8WWA1 COG8-201ENST00000562081 1731 ntAPPRIS P1 TSL 5 BASIC23.42■■□□□ 1.34
TMEM40Q8WWA1 KCNH6-203ENST00000580652 1703 ntTSL 1 (best) BASIC23.42■■□□□ 1.34
TMEM40Q8WWA1 KPTN-201ENST00000338134 1691 ntAPPRIS P1 TSL 1 (best) BASIC23.42■■□□□ 1.34
TMEM40Q8WWA1 ARL6IP4-204ENST00000392435 1339 ntAPPRIS ALT2 TSL 1 (best) BASIC23.42■■□□□ 1.34
TMEM40Q8WWA1 ZNF668-205ENST00000426488 2282 ntTSL 5 BASIC23.42■■□□□ 1.34
TMEM40Q8WWA1 TULP1-202ENST00000322263 1941 ntTSL 1 (best) BASIC23.42■■□□□ 1.34
TMEM40Q8WWA1 GGTLC1-202ENST00000286890 1028 ntAPPRIS P1 TSL 1 (best) BASIC23.42■■□□□ 1.34
TMEM40Q8WWA1 GPX1P1-201ENST00000388829 606 ntBASIC23.42■■□□□ 1.34
TMEM40Q8WWA1 CNN2P6-201ENST00000439038 900 ntBASIC23.42■■□□□ 1.34
TMEM40Q8WWA1 ARF3-202ENST00000447318 1089 ntTSL 2 BASIC23.42■■□□□ 1.34
TMEM40Q8WWA1 BX890604.1-207ENST00000486571 904 ntTSL 5 BASIC23.42■■□□□ 1.34
TMEM40Q8WWA1 ABCC6P2-202ENST00000542005 706 ntTSL 1 (best) BASIC23.42■■□□□ 1.34
TMEM40Q8WWA1 ABCC6-204ENST00000575728 714 ntTSL 1 (best) BASIC23.42■■□□□ 1.34
TMEM40Q8WWA1 AC005697.1-201ENST00000582441 582 ntAPPRIS P1 TSL 4 BASIC23.42■■□□□ 1.34
TMEM40Q8WWA1 MBD3L1-202ENST00000595891 872 ntAPPRIS P1 TSL 2 BASIC23.42■■□□□ 1.34
TMEM40Q8WWA1 PACRGL-227ENST00000513459 1773 ntTSL 5 BASIC23.42■■□□□ 1.34
TMEM40Q8WWA1 CREB3L3-202ENST00000595923 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC23.42■■□□□ 1.34
TMEM40Q8WWA1 RNF19B-202ENST00000356990 2598 ntTSL 1 (best) BASIC23.42■■□□□ 1.34
TMEM40Q8WWA1 GATS-205ENST00000436886 2726 ntAPPRIS P1 TSL 1 (best) BASIC23.41■■□□□ 1.34
TMEM40Q8WWA1 SLC39A14-202ENST00000289952 2137 ntAPPRIS ALT2 TSL 2 BASIC23.41■■□□□ 1.34
TMEM40Q8WWA1 MRPL37-206ENST00000605337 1582 ntTSL 5 BASIC23.41■■□□□ 1.34
TMEM40Q8WWA1 NAA20-201ENST00000310450 920 ntTSL 2 BASIC23.41■■□□□ 1.34
TMEM40Q8WWA1 MAP1LC3A-202ENST00000374837 961 ntTSL 3 BASIC23.41■■□□□ 1.34
TMEM40Q8WWA1 AC007322.1-201ENST00000426983 750 ntBASIC23.41■■□□□ 1.34
TMEM40Q8WWA1 NDUFS3-207ENST00000529276 558 ntTSL 2 BASIC23.41■■□□□ 1.34
TMEM40Q8WWA1 HTATIP2-208ENST00000532505 595 ntTSL 2 BASIC23.41■■□□□ 1.34
TMEM40Q8WWA1 PARD6A-203ENST00000602551 1171 ntTSL 5 BASIC23.41■■□□□ 1.34
TMEM40Q8WWA1 CHSY1-201ENST00000254190 4550 ntAPPRIS P1 TSL 1 (best) BASIC23.41■■□□□ 1.34
TMEM40Q8WWA1 OSR2-210ENST00000523368 1519 ntTSL 1 (best) BASIC23.41■■□□□ 1.34
TMEM40Q8WWA1 CDK5-204ENST00000485972 1758 ntAPPRIS P1 TSL 1 (best) BASIC23.41■■□□□ 1.34
TMEM40Q8WWA1 TOP1MT-201ENST00000329245 1958 ntAPPRIS P1 TSL 1 (best) BASIC23.41■■□□□ 1.34
TMEM40Q8WWA1 NRL-203ENST00000397002 1976 ntAPPRIS P1 TSL 1 (best) BASIC23.41■■□□□ 1.34
TMEM40Q8WWA1 AVPR2-201ENST00000337474 1622 ntAPPRIS P1 TSL 1 (best) BASIC23.41■■□□□ 1.34
TMEM40Q8WWA1 AC098864.1-205ENST00000315302 2260 ntTSL 2 BASIC23.4■■□□□ 1.34
TMEM40Q8WWA1 CASK-201ENST00000378154 2494 ntTSL 5 BASIC23.4■■□□□ 1.34
TMEM40Q8WWA1 KRT7-201ENST00000331817 1754 ntAPPRIS P1 TSL 1 (best) BASIC23.4■■□□□ 1.34
TMEM40Q8WWA1 ARMC10-204ENST00000425331 2443 ntTSL 2 BASIC23.4■■□□□ 1.34
TMEM40Q8WWA1 HOXA10-206ENST00000613671 2175 ntTSL 5 BASIC23.4■■□□□ 1.34
TMEM40Q8WWA1 ASPSCR1-201ENST00000306729 2123 ntAPPRIS ALT2 TSL 2 BASIC23.4■■□□□ 1.34
TMEM40Q8WWA1 UQCRFS1P1-201ENST00000435169 820 ntBASIC23.4■■□□□ 1.34
TMEM40Q8WWA1 GUSBP6-202ENST00000438529 1198 ntBASIC23.4■■□□□ 1.34
TMEM40Q8WWA1 LINC01117-201ENST00000443670 699 ntTSL 5 BASIC23.4■■□□□ 1.34
TMEM40Q8WWA1 HAGH-203ENST00000455446 1276 ntTSL 2 BASIC23.4■■□□□ 1.34
TMEM40Q8WWA1 ZPBP-201ENST00000046087 1213 ntAPPRIS P3 TSL 1 (best) BASIC23.4■■□□□ 1.34
TMEM40Q8WWA1 HERC2P5-204ENST00000569697 1214 ntTSL 2 BASIC23.4■■□□□ 1.34
TMEM40Q8WWA1 AC005181.1-201ENST00000604782 1256 ntBASIC23.4■■□□□ 1.34
TMEM40Q8WWA1 PARP1-210ENST00000629232 477 ntTSL 5 BASIC23.4■■□□□ 1.34
TMEM40Q8WWA1 PNLIPRP2-204ENST00000591655 1456 ntAPPRIS ALT1 TSL 5 BASIC23.4■■□□□ 1.34
TMEM40Q8WWA1 CDKN1C-202ENST00000414822 2051 ntAPPRIS P3 TSL 1 (best) BASIC23.4■■□□□ 1.34
TMEM40Q8WWA1 AC079328.2-202ENST00000560903 1410 ntTSL 1 (best) BASIC23.4■■□□□ 1.34
TMEM40Q8WWA1 DUSP26-201ENST00000256261 1835 ntAPPRIS P1 TSL 1 (best) BASIC23.4■■□□□ 1.34
TMEM40Q8WWA1 C11orf63-201ENST00000227349 3147 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.34
TMEM40Q8WWA1 AC138028.2-201ENST00000440406 1539 ntTSL 2 BASIC23.39■■□□□ 1.34
TMEM40Q8WWA1 UCHL5-204ENST00000367451 1346 ntTSL 5 BASIC23.39■■□□□ 1.34
TMEM40Q8WWA1 TMPO-201ENST00000261210 820 ntTSL 1 (best) BASIC23.39■■□□□ 1.33
TMEM40Q8WWA1 DTYMK-201ENST00000305784 1232 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.33
TMEM40Q8WWA1 CD8B-205ENST00000393761 932 ntTSL 1 (best) BASIC23.39■■□□□ 1.33
TMEM40Q8WWA1 MDK-204ENST00000395569 686 ntTSL 1 (best) BASIC23.39■■□□□ 1.33
TMEM40Q8WWA1 ARL6IP4-205ENST00000412505 818 ntTSL 5 BASIC23.39■■□□□ 1.33
TMEM40Q8WWA1 CD8B-206ENST00000431506 692 ntAPPRIS ALT2 TSL 5 BASIC23.39■■□□□ 1.33
TMEM40Q8WWA1 KRT18P20-201ENST00000548986 1279 ntBASIC23.39■■□□□ 1.33
TMEM40Q8WWA1 LITAF-205ENST00000570904 1118 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.33
TMEM40Q8WWA1 AP005205.2-201ENST00000577327 491 ntTSL 2 BASIC23.39■■□□□ 1.33
TMEM40Q8WWA1 AC053503.5-201ENST00000601508 636 ntBASIC23.39■■□□□ 1.33
TMEM40Q8WWA1 CD99-212ENST00000624481 1089 ntAPPRIS ALT2 TSL 2 BASIC23.39■■□□□ 1.33
TMEM40Q8WWA1 PEX10-204ENST00000507596 1941 ntAPPRIS ALT1 TSL 5 BASIC23.39■■□□□ 1.33
TMEM40Q8WWA1 LTK-203ENST00000453182 2412 ntTSL 2 BASIC23.39■■□□□ 1.33
TMEM40Q8WWA1 SLC19A1-209ENST00000485649 1896 ntAPPRIS ALT2 TSL 2 BASIC23.39■■□□□ 1.33
TMEM40Q8WWA1 BTBD2-201ENST00000255608 2649 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
TMEM40Q8WWA1 VIL1-204ENST00000440053 1454 ntTSL 1 (best) BASIC23.38■■□□□ 1.33
TMEM40Q8WWA1 SAMD4B-208ENST00000598913 2877 ntAPPRIS ALT1 TSL 1 (best) BASIC23.38■■□□□ 1.33
TMEM40Q8WWA1 MAGI2-AS3-209ENST00000448195 774 ntTSL 3 BASIC23.38■■□□□ 1.33
TMEM40Q8WWA1 AC083906.2-201ENST00000511578 360 ntBASIC23.38■■□□□ 1.33
TMEM40Q8WWA1 F2RL3-202ENST00000599210 613 ntTSL 2 BASIC23.38■■□□□ 1.33
TMEM40Q8WWA1 AL121832.2-201ENST00000610979 668 ntBASIC23.38■■□□□ 1.33
TMEM40Q8WWA1 MMP25-204ENST00000612971 1017 ntTSL 5 BASIC23.38■■□□□ 1.33
TMEM40Q8WWA1 AC010536.3-201ENST00000620306 533 ntBASIC23.38■■□□□ 1.33
TMEM40Q8WWA1 DHRS2-202ENST00000344777 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC23.38■■□□□ 1.33
TMEM40Q8WWA1 TMEM51-203ENST00000400796 1842 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
TMEM40Q8WWA1 PLAGL1-207ENST00000417959 1645 ntTSL 1 (best) BASIC23.37■■□□□ 1.33
TMEM40Q8WWA1 RALB-201ENST00000272519 2344 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
TMEM40Q8WWA1 DPP7-201ENST00000371579 1590 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
TMEM40Q8WWA1 SLC25A47-202ENST00000557052 1552 ntTSL 1 (best) BASIC23.37■■□□□ 1.33
TMEM40Q8WWA1 C9orf163-202ENST00000624034 2573 ntBASIC23.37■■□□□ 1.33
TMEM40Q8WWA1 CEACAM4-201ENST00000221954 1205 ntAPPRIS P2 TSL 1 (best) BASIC23.37■■□□□ 1.33
TMEM40Q8WWA1 FDX2-202ENST00000393708 1012 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
TMEM40Q8WWA1 METTL15-202ENST00000403099 795 ntTSL 5 BASIC23.37■■□□□ 1.33
TMEM40Q8WWA1 LINC01816-201ENST00000414141 662 ntTSL 1 (best) BASIC23.37■■□□□ 1.33
TMEM40Q8WWA1 TSPY6P-201ENST00000448518 926 ntBASIC23.37■■□□□ 1.33
TMEM40Q8WWA1 SLC7A5P2-201ENST00000553010 536 ntBASIC23.37■■□□□ 1.33
TMEM40Q8WWA1 AC027307.1-201ENST00000590252 457 ntTSL 5 BASIC23.37■■□□□ 1.33
TMEM40Q8WWA1 CEACAM4-203ENST00000600925 899 ntAPPRIS ALT2 TSL 2 BASIC23.37■■□□□ 1.33
TMEM40Q8WWA1 C14orf80-201ENST00000329886 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC23.37■■□□□ 1.33
TMEM40Q8WWA1 GADD45GIP1-201ENST00000316939 1782 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
TMEM40Q8WWA1 HAUS4-201ENST00000206474 1642 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
Retrieved 100 of 98,524 protein–RNA pairs in 71.6 ms